Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 225 件

3J4F
DownloadVisualize
BU of 3j4f by Molmil
Structure of HIV-1 capsid protein by cryo-EM
分子名称: capsid protein
著者Zhao, G, Perilla, J.R, Meng, X, Schulten, K, Zhang, P.
登録日2013-07-11
公開日2013-07-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
8FAC
DownloadVisualize
BU of 8fac by Molmil
Structure of the leucine-rich repeat kinase 1 monomer
分子名称: GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 1
著者Metcalfe, R.D, Martinez Fiesco, J.A, Zhang, P.
登録日2022-11-25
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.92 Å)
主引用文献Structure and regulation of full-length human leucine-rich repeat kinase 1.
Nat Commun, 14, 2023
3J34
DownloadVisualize
BU of 3j34 by Molmil
Structure of HIV-1 Capsid Protein by Cryo-EM
分子名称: capsid protein
著者Zhao, G, Perilla, J.R, Yufenyuy, E, Meng, X, Chen, B, Ning, J, Ahn, J, Gronenborn, A.M, Schulten, K, Aiken, C, Zhang, P.
登録日2013-02-23
公開日2013-05-29
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
6LZ3
DownloadVisualize
BU of 6lz3 by Molmil
Structure of cryptochrome in active conformation
分子名称: Cryptochrome2, FLAVIN-ADENINE DINUCLEOTIDE
著者Shao, K, Zhang, X, Zhang, P.
登録日2020-02-18
公開日2020-04-29
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The oligomeric structures of plant cryptochromes.
Nat.Struct.Mol.Biol., 27, 2020
6LZ7
DownloadVisualize
BU of 6lz7 by Molmil
Tetrameric structure of ZmCRY1a PHR domain
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE
著者Shao, K, Zhang, X, Zhang, P.
登録日2020-02-18
公開日2020-05-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.59936166 Å)
主引用文献The oligomeric structures of plant cryptochromes.
Nat.Struct.Mol.Biol., 27, 2020
2M6B
DownloadVisualize
BU of 2m6b by Molmil
Structure of full-length transmembrane domains of human glycine receptor alpha1 monomer subunit
分子名称: Full-Length Transmembrane Domains of Human Glycine Receptor alpha1 Subunit
著者Mowrey, D, Cui, T, Jia, Y, Ma, D, Makhov, A.M, Zhang, P, Tang, P, Xu, Y.
登録日2013-03-28
公開日2013-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Open-Channel Structures of the Human Glycine Receptor alpha 1 Full-Length Transmembrane Domain.
Structure, 21, 2013
5E8L
DownloadVisualize
BU of 5e8l by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase 11 from Arabidopsis thaliana
分子名称: Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic
著者Wang, C, Chen, Q, Fan, D, Li, J, Wang, G, Zhang, P.
登録日2015-10-14
公開日2015-11-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.807 Å)
主引用文献Structural Analyses of Short-Chain Prenyltransferases Identify an Evolutionarily Conserved GFPPS Clade in Brassicaceae Plants.
Mol Plant, 9, 2016
5E8H
DownloadVisualize
BU of 5e8h by Molmil
Crystal structure of geranylfarnesyl pyrophosphate synthases 2 from Arabidopsis thaliana
分子名称: Geranylgeranyl pyrophosphate synthase 3, chloroplastic
著者Wang, C, Chen, Q, Wang, G, Zhang, P.
登録日2015-10-14
公開日2015-11-11
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analyses of Short-Chain Prenyltransferases Identify an Evolutionarily Conserved GFPPS Clade in Brassicaceae Plants.
Mol Plant, 9, 2016
5E8K
DownloadVisualize
BU of 5e8k by Molmil
Crystal structure of polyprenyl pyrophosphate synthase 2 from Arabidopsis thaliana
分子名称: Geranylgeranyl pyrophosphate synthase 10, mitochondrial
著者Wang, C, Chen, Q, Fan, D, Li, J, Wang, G, Zhang, P.
登録日2015-10-14
公開日2015-11-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.028 Å)
主引用文献Structural Analyses of Short-Chain Prenyltransferases Identify an Evolutionarily Conserved GFPPS Clade in Brassicaceae Plants.
Mol Plant, 9, 2016
6KZ8
DownloadVisualize
BU of 6kz8 by Molmil
Crystal structure of plant Phospholipase D alpha complex with phosphatidic acid
分子名称: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, CALCIUM ION, Phospholipase D alpha 1
著者Li, J.X, Yu, F, Zhang, P.
登録日2019-09-23
公開日2019-11-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.291 Å)
主引用文献Crystal structure of plant PLD alpha 1 reveals catalytic and regulatory mechanisms of eukaryotic phospholipase D.
Cell Res., 30, 2020
6KZ9
DownloadVisualize
BU of 6kz9 by Molmil
Crystal structure of plant Phospholipase D alpha
分子名称: CALCIUM ION, Phospholipase D alpha 1
著者Li, J.X, Yu, F, Zhang, P.
登録日2019-09-23
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Crystal structure of plant PLD alpha 1 reveals catalytic and regulatory mechanisms of eukaryotic phospholipase D.
Cell Res., 30, 2020
5FJB
DownloadVisualize
BU of 5fjb by Molmil
Cyclophilin A Stabilize HIV-1 Capsid through a Novel Non- canonical Binding Site
分子名称: GAG POLYPROTEIN, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
著者Liu, C, Perilla, J.R, Ning, J, Lu, M, Hou, G, Ramalhu, R, Bedwell, G.J, Ahn, J, Shi, J, Gronenborn, A.M, Prevelige Jr, P.E, Rousso, I, Aiken, C, Polenova, T, Schulten, K, Zhang, P.
登録日2015-10-07
公開日2016-03-16
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Cyclophilin a Stabilizes the HIV-1 Capsid Through a Novel Non-Canonical Binding Site.
Nat.Commun., 7, 2016
7VM8
DownloadVisualize
BU of 7vm8 by Molmil
Crystal structure of the MtDMI1 gating ring
分子名称: Ion channel DMI1
著者Huang, X, Zhang, P.
登録日2021-10-08
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.034 Å)
主引用文献Constitutive activation of a nuclear-localized calcium channel complex in Medicago truncatula.
Proc.Natl.Acad.Sci.USA, 119, 2022
7LKI
DownloadVisualize
BU of 7lki by Molmil
The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8
分子名称: Epitope III peptide GLY-ALA-PRO-THR-TYR-SER-TRP-GLY, antibody 1H8 heavy chain, antibody 1H8 light chain
著者Deng, L, Zhang, P.
登録日2021-02-02
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A conserved epitope III on hepatitis C virus E2 protein has alternate conformations facilitating cell binding or virus neutralization.
Proc.Natl.Acad.Sci.USA, 118, 2021
3IWP
DownloadVisualize
BU of 3iwp by Molmil
Crystal structure of human copper homeostasis protein CutC
分子名称: Copper homeostasis protein cutC homolog
著者Li, Y, Du, J, Zhang, P, Ding, J.
登録日2009-09-03
公開日2009-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human copper homeostasis protein CutC reveals a potential copper-binding site
To be Published
1XRF
DownloadVisualize
BU of 1xrf by Molmil
The Crystal Structure of a Novel, Latent Dihydroorotase from Aquifex aeolicus at 1.7 A resolution
分子名称: Dihydroorotase, SULFATE ION, ZINC ION
著者Martin, P.D, Purcarea, C, Zhang, P, Vaishnav, A, Sadecki, S, Guy-Evans, H.I, Evans, D.R, Edwards, B.F.
登録日2004-10-14
公開日2005-07-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structure of a novel, latent dihydroorotase from Aquifex aeolicus at 1.7A resolution
J.Mol.Biol., 348, 2005
3J3Y
DownloadVisualize
BU of 3j3y by Molmil
Atomic-level structure of the entire HIV-1 capsid (186 hexamers + 12 pentamers)
分子名称: capsid protein
著者Perilla, J.R, Zhao, G, Zhang, P, Schulten, K.J.
登録日2013-05-06
公開日2013-05-29
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
6SKN
DownloadVisualize
BU of 6skn by Molmil
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
分子名称: Gag protein
著者Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
登録日2019-08-16
公開日2020-08-26
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020
4OV4
DownloadVisualize
BU of 4ov4 by Molmil
Isopropylmalate synthase binding with ketoisovalerate
分子名称: 2-isopropylmalate synthase, 3-METHYL-2-OXOBUTANOIC ACID, ZINC ION
著者Zhang, Z, Wu, J, Wang, C, Zhang, P.
登録日2014-02-20
公開日2014-08-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Subdomain II of alpha-isopropylmalate synthase is essential for activity: inferring a mechanism of feedback inhibition.
J.Biol.Chem., 289, 2014
5XSJ
DownloadVisualize
BU of 5xsj by Molmil
XylFII-LytSN complex
分子名称: Periplasmic binding protein/LacI transcriptional regulator, Signal transduction histidine kinase, LytS, ...
著者Li, J.X, Wang, C.Y, Zhang, P.
登録日2017-06-14
公開日2017-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Molecular mechanism of environmental d-xylose perception by a XylFII-LytS complex in bacteria
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XSD
DownloadVisualize
BU of 5xsd by Molmil
XylFII-LytSN complex mutant - D103A
分子名称: Periplasmic binding protein/LacI transcriptional regulator, Signal transduction histidine kinase, LytS
著者Li, J.X, Wang, C.Y, Zhang, P.
登録日2017-06-13
公開日2017-08-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular mechanism of environmental d-xylose perception by a XylFII-LytS complex in bacteria
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6SKK
DownloadVisualize
BU of 6skk by Molmil
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
分子名称: capsid protein
著者Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
登録日2019-08-15
公開日2020-08-26
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020
4O1I
DownloadVisualize
BU of 4o1i by Molmil
Crystal Structure of the regulatory domain of MtbGlnR
分子名称: Transcriptional regulatory protein
著者Lin, W, Wang, C, Zhang, P.
登録日2013-12-16
公開日2014-04-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Atypical OmpR/PhoB Subfamily Response Regulator GlnR of Actinomycetes Functions as a Homodimer, Stabilized by the Unphosphorylated Conserved Asp-focused Charge Interactions
J.Biol.Chem., 289, 2014
4O1H
DownloadVisualize
BU of 4o1h by Molmil
Crystal Structure of the regulatory domain of AmeGlnR
分子名称: Transcription regulator GlnR
著者Lin, W, Wang, C, Zhang, P.
登録日2013-12-16
公開日2014-04-23
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Atypical OmpR/PhoB Subfamily Response Regulator GlnR of Actinomycetes Functions as a Homodimer, Stabilized by the Unphosphorylated Conserved Asp-focused Charge Interactions
J.Biol.Chem., 289, 2014
4OV9
DownloadVisualize
BU of 4ov9 by Molmil
Structure of isopropylmalate synthase binding with alpha-isopropylmalate
分子名称: (2S)-2-hydroxy-2-(propan-2-yl)butanedioic acid, ZINC ION, isopropylmalate synthase
著者Zhang, Z, Wu, J, Wang, C, Zhang, P.
登録日2014-02-20
公開日2014-08-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Subdomain II of alpha-isopropylmalate synthase is essential for activity: inferring a mechanism of feedback inhibition.
J.Biol.Chem., 289, 2014

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon