Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 97 件

4BQZ
DownloadVisualize
BU of 4bqz by Molmil
Rat NTPDase2 in complex with Mg GMPPNP
分子名称: ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 2, GLYCEROL, MAGNESIUM ION, ...
著者Zebisch, M, Schaefer, P, Lauble, P, Straeter, N.
登録日2013-06-03
公開日2013-07-17
最終更新日2013-12-25
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic Snapshots Along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases
Structure, 21, 2013
4BRI
DownloadVisualize
BU of 4bri by Molmil
Legionella pneumophila NTPDase1 crystal form II (closed) in complex with MG UMPPNP
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]uridine, CHLORIDE ION, ...
著者Zebisch, M, Schaefer, P, Lauble, P, Straeter, N.
登録日2013-06-04
公開日2013-07-17
最終更新日2013-12-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic Snapshots Along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases
Structure, 21, 2013
4CD1
DownloadVisualize
BU of 4cd1 by Molmil
RnNTPDase2 in complex with PSB-071
分子名称: 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,10-DIOXO-9,10-DIHYDROANTHRACENE-2-SULFONATE, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 2
著者Zebisch, M, Schaefer, P, Straeter, N.
登録日2013-10-29
公開日2014-02-12
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Ntpdase2 in Complex with the Sulfoanthraquinone Inhibitor Psb-071.
J.Struct.Biol., 185, 2014
4CD3
DownloadVisualize
BU of 4cd3 by Molmil
RnNTPDase2 X4 variant in complex with PSB-071
分子名称: 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,10-DIOXO-9,10-DIHYDROANTHRACENE-2-SULFONATE, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 2, GLYCEROL
著者Zebisch, M, Schaefer, P, Straeter, N.
登録日2013-10-29
公開日2014-02-12
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Crystal Structure of Ntpdase2 in Complex with the Sulfoanthraquinone Inhibitor Psb-071.
J.Struct.Biol., 185, 2014
7SLR
DownloadVisualize
BU of 7slr by Molmil
HIV Reverse Transcriptase with compound Pyr01
分子名称: 5-(difluoromethyl)-3-({1-[(5-fluoro-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl}oxy)-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
著者Klein, D.J, Zebisch, M, Gu, M.
登録日2021-10-24
公開日2022-11-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.179 Å)
主引用文献Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
7SLS
DownloadVisualize
BU of 7sls by Molmil
HIV Reverse Transcriptase with compound Pyr02
分子名称: 5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile, Reverse transcriptase/ribonuclease H
著者Klein, D.J, Zebisch, M, Gu, M.
登録日2021-10-24
公開日2022-11-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.078 Å)
主引用文献Potent targeted activator of cell kill molecules eliminate cells expressing HIV-1.
Sci Transl Med, 15, 2023
8P8C
DownloadVisualize
BU of 8p8c by Molmil
HUMAN CD38 ECTODOMAIN BOUND TO COMPOUND 9-ADPR ADDUCT
分子名称: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[4-[[4-(2-methoxyethoxy)cyclohexyl]amino]-1-methyl-2-oxidanylidene-quinolin-6-yl]pyrazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Rangel, V, Zebisch, M, Doyle, K.J, Burli, R.W.
登録日2023-05-31
公開日2023-07-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献A Covalent Binding Mode of a Pyrazole-Based CD38 Inhibitor
Helv.Chim.Acta, 106, 2023
5BQC
DownloadVisualize
BU of 5bqc by Molmil
Crystal structure of Norrin in complex with the cysteine-rich domain of Frizzled 4 and sucrose octasulfate
分子名称: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Frizzled-4, ...
著者Chang, T.-H, Hsieh, F.-L, Zebisch, M, Harlos, K, Jones, E.Y.
登録日2015-05-28
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and functional properties of Norrin mimic Wnt for signalling with Frizzled4, Lrp5/6, and proteoglycan.
Elife, 4, 2015
4H2F
DownloadVisualize
BU of 4h2f by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form I (open) in complex with adenosine
分子名称: 5'-nucleotidase, ADENOSINE, CALCIUM ION, ...
著者Straeter, N, Knapp, K.M, Zebisch, M, Pippel, J.
登録日2012-09-12
公開日2012-11-28
最終更新日2014-10-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
4H2G
DownloadVisualize
BU of 4h2g by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form II (open) in complex with adenosine
分子名称: 5'-nucleotidase, ADENOSINE, CALCIUM ION, ...
著者Straeter, N, Knapp, K.M, Zebisch, M, Pippel, J.
登録日2012-09-12
公開日2012-11-28
最終更新日2012-12-26
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
4H2I
DownloadVisualize
BU of 4h2i by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form III (closed) in complex with AMPCP
分子名称: 5'-nucleotidase, CALCIUM ION, CHLORIDE ION, ...
著者Straeter, N, Knapp, K.M, Zebisch, M, Pippel, J.
登録日2012-09-12
公開日2012-11-28
最終更新日2018-06-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
6F30
DownloadVisualize
BU of 6f30 by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with UDPGlcNAc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F2V
DownloadVisualize
BU of 6f2v by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with AMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F2T
DownloadVisualize
BU of 6f2t by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F33
DownloadVisualize
BU of 6f33 by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with AMPNPP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F2Y
DownloadVisualize
BU of 6f2y by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with Ap4A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2017-11-27
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
4H1Y
DownloadVisualize
BU of 4h1y by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form II (open) in complex with PSB11552
分子名称: 2,2'-[(2-{[2-({[(2S,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]carbonyl}amino)ethyl]amino}-2-oxoethyl)imino]diacetic acid (non-preferred name), 5'-nucleotidase, CALCIUM ION, ...
著者Pippel, J, Zebisch, M, Knapp, K, Straeter, N.
登録日2012-09-11
公開日2012-11-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
6G4G
DownloadVisualize
BU of 6g4g by Molmil
Full length ectodomain of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) including the SMB domains but with a partially disordered active site structure
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Dohler, C, Zebisch, M, Strater, N.
登録日2018-03-27
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallization of ectonucleotide phosphodiesterase/pyrophosphatase-3 and orientation of the SMB domains in the full-length ectodomain.
Acta Crystallogr F Struct Biol Commun, 74, 2018
4A59
DownloadVisualize
BU of 4a59 by Molmil
Crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 3 (NTPDase3) in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, NUCLEOSIDE-TRIPHOSPHATASE 1
著者Krug, U, Zebisch, M, Straeter, N.
登録日2011-10-24
公開日2011-11-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insight Into the Activation Mechanism of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction.
J.Biol.Chem., 287, 2012
4A5B
DownloadVisualize
BU of 4a5b by Molmil
Crystal structure of the C258S/C268S variant of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 1 (NTPDase1)
分子名称: NUCLEOSIDE-TRIPHOSPHATASE 2
著者Krug, U, Zebisch, M, Strater, N.
登録日2011-10-24
公開日2011-11-30
最終更新日2013-12-25
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural Insight Into Activation Mechanism of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction.
J.Biol.Chem., 287, 2012
4A57
DownloadVisualize
BU of 4a57 by Molmil
CRYSTAL STRUCTURE OF TOXOPLASMA GONDII NUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 3 (NTPDASE3)
分子名称: CHLORIDE ION, NUCLEOSIDE-TRIPHOSPHATASE 1
著者Krug, U, Zebisch, M, Straeter, N.
登録日2011-10-24
公開日2011-11-30
最終更新日2013-12-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insight Into the Activation Mechanism of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction.
J.Biol.Chem., 287, 2012
4A5A
DownloadVisualize
BU of 4a5a by Molmil
Crystal structure of the C258S/C268S variant of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 3 (NTPDase3) in complex with magnesium and AMPPNP
分子名称: MAGNESIUM ION, NUCLEOSIDE-TRIPHOSPHATASE 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Krug, U, Zebisch, M, Straeter, N.
登録日2011-10-24
公開日2011-11-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural Insight Into the Activation Mechanism of Toxoplasma Gondii Nucleoside Triphosphate Diphosphohydrolases by Disulfide Reduction.
J.Biol.Chem., 287, 2012
<1234

 

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon