Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 304 results

6YJF
DownloadVisualize
BU of 6yjf by Molmil
Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5
Descriptor: (2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one, GLYCEROL, Phosphoglycerate kinase
Authors:Hyvonen, M, Brear, P, Blaszczyk, B.K.
Deposit date:2020-04-03
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Phosphoglycerate Kinase as a potential target for antimalarial therapy
to be published
1BTK
DownloadVisualize
BU of 1btk by Molmil
PH DOMAIN AND BTK MOTIF FROM BRUTON'S TYROSINE KINASE MUTANT R28C
Descriptor: BRUTON'S TYROSINE KINASE, SODIUM ION, ZINC ION
Authors:Hyvonen, M, Saraste, M.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the PH domain and Btk motif from Bruton's tyrosine kinase: molecular explanations for X-linked agammaglobulinaemia.
EMBO J., 16, 1997
9EZ8
DownloadVisualize
BU of 9ez8 by Molmil
Cryo-EM structure of the icosahedral lumazine synthase from Vicia faba.
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Chee, M, Trapani, S, Hoh, F, Lai Kee Him, J, Yvon, M, Blanc, S, Bron, P.
Deposit date:2024-04-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structure of the icosahedral lumazine synthase from Vicia faba.
To Be Published
4UQO
DownloadVisualize
BU of 4uqo by Molmil
RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA REPAIR AND RECOMBINATION PROTEIN RADA, MAGNESIUM ION, ...
Authors:Marsh, M.E, Ehebauer, M.T, Scott, D, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2014-06-24
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:ATP Half-Sites in Rada and Rad51 Recombinases Bind Nucleotides
FEBS Open Bio, 6, 2016
7OBI
DownloadVisualize
BU of 7obi by Molmil
Consensus tetratricopeptide repeat protein type RV4
Descriptor: CTPR-rv4, PHOSPHATE ION
Authors:Eapen, R.S, Perez-Riba, A, Fischer, G, Itzhaki, L.S, Hyvonen, M.
Deposit date:2021-04-22
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Unraveling the Mechanics of a Repeat-Protein Nanospring: From Folding of Individual Repeats to Fluctuations of the Superhelix.
Acs Nano, 16, 2022
5FPK
DownloadVisualize
BU of 5fpk by Molmil
MONOMERIC RADA IN COMPLEX WITH FATA TETRAPEPTIDE
Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTG PEPTIDE, PHOSPHATE ION
Authors:Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M.
Deposit date:2015-12-01
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.343 Å)
Cite:Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett., 590, 2016
5FOT
DownloadVisualize
BU of 5fot by Molmil
HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTU TETRAPEPTIDE
Descriptor: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHTU PEPTIDE, PHOSPHATE ION
Authors:Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M.
Deposit date:2015-11-26
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.189 Å)
Cite:Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett., 590, 2016
6YJE
DownloadVisualize
BU of 6yje by Molmil
Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEG3350 and ammonium acetate at pH 5.5
Descriptor: (2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one, Phosphoglycerate kinase
Authors:Blaszczyk, B.K, Hyvonen, M.
Deposit date:2020-04-03
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Phosphoglycerate Kinase as a potential target for antimalarial therapy
to be published
5MOV
DownloadVisualize
BU of 5mov by Molmil
Crystal structure of Ck2alpha with ZT0633 bound
Descriptor: 4'-HYDROXYCINNAMIC ACID, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Georgiou, K, Iegre, J, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
8AE7
DownloadVisualize
BU of 8ae7 by Molmil
The strucuture of Compound 15 bound to CK2alpha
Descriptor: 2-[5,6-bis(bromanyl)-1H-indazol-3-yl]ethanenitrile, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Brear, P, De Fusco, C, Atkinson, E, Frances, N, Iegre, J, Venkitaraman, A, Hyvonen, M, Spring, D.
Deposit date:2022-07-12
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:A fragment-based approach leading to the discovery of inhibitors of CK2 alpha with a novel mechanism of action.
Rsc Med Chem, 13, 2022
8AEM
DownloadVisualize
BU of 8aem by Molmil
Structure of Compound 13 bound to CK2alpha
Descriptor: 2-(5-chloranyl-1H-indol-3-yl)ethanenitrile, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Brear, P, Fusco, C, Atkinson, E, Iegre, J, Francis-Newton, N, Venkotaraman, A, Spring, D, Hyvonen, M.
Deposit date:2022-07-13
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A fragment-based approach leading to the discovery of inhibitors of CK2 alpha with a novel mechanism of action.
Rsc Med Chem, 13, 2022
6YPJ
DownloadVisualize
BU of 6ypj by Molmil
Crystal Structure of CK2alpha with Compound 1 bound
Descriptor: 4-[(4-phenyl-1,3-thiazol-2-yl)amino]benzoic acid, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, Hyvonen, M.
Deposit date:2020-04-16
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Proposed Allosteric Inhibitors Bind to the ATP Site of CK2 alpha.
J.Med.Chem., 63, 2020
5MMF
DownloadVisualize
BU of 5mmf by Molmil
Crystal Structure of CK2alpha with Compound 7 bound
Descriptor: (3-chloranyl-4-phenyl-phenyl)methyl-propyl-azanium, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Georgiou, K.H, Spring, D, Hyvonen, M.
Deposit date:2016-12-09
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
5MO7
DownloadVisualize
BU of 5mo7 by Molmil
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
Descriptor: 3-[(3-chloranyl-4-phenyl-phenyl)methylamino]propanamide, Casein kinase II subunit alpha, PHOSPHATE ION
Authors:Brear, P, De Fusco, C, Georgiou, K, Iegre, J, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2016-12-13
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
5MOD
DownloadVisualize
BU of 5mod by Molmil
Crystal Structure of CK2alpha with N-(3-(((2-chloro-[1,1'-biphenyl]-4-yl)methyl)amino)propyl)methanesulfonamide bound
Descriptor: (3-chloranyl-4-propan-2-yloxy-phenyl)methanamine, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Georgiou, K, Iegre, J, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
5MOW
DownloadVisualize
BU of 5mow by Molmil
Crystal Structure of CK2alpha with ZT0432 bound
Descriptor: 5-bromopyridine-2,3-diamine, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Georgiou, K, Iegre, J, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
7FSA
DownloadVisualize
BU of 7fsa by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 24
Descriptor: (1M)-6-[4-(3-aminobenzene-1-sulfonyl)piperazine-1-sulfonyl][1,1'-biphenyl]-3,3',4,4'-tetrol, 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FS1
DownloadVisualize
BU of 7fs1 by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 11
Descriptor: (1P)-N-{[4-(3,4-dihydroxybenzene-1-sulfonyl)phenyl]methyl}-3',4,4',5-tetrahydroxy[1,1'-biphenyl]-2-sulfonamide, 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FRY
DownloadVisualize
BU of 7fry by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 6
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, N-{2-[4-(3,4-dihydroxybenzene-1-sulfonyl)phenyl]ethyl}-3,4-dihydroxybenzene-1-sulfonamide, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.958 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FS3
DownloadVisualize
BU of 7fs3 by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 15
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, N-{[4-(3,4-dihydroxybenzene-1-sulfonyl)phenyl]methyl}-4,4',5-trihydroxy[1,1'-biphenyl]-2-sulfonamide, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.655 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FRV
DownloadVisualize
BU of 7frv by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 3
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 4,4'-sulfonyldi(benzene-1,2-diol), MAGNESIUM ION, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FS7
DownloadVisualize
BU of 7fs7 by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 20
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, N-{[4-(3,4-dihydroxybenzene-1-sulfonyl)phenyl]methyl}-N-(3,4-dihydroxyphenyl)-3,4-dihydroxybenzene-1-sulfonamide, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.774 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FRZ
DownloadVisualize
BU of 7frz by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 7
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 3,4-dihydroxy-N-{[4-(3-hydroxybenzene-1-sulfonyl)phenyl]methyl}benzene-1-sulfonamide, MAGNESIUM ION, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FRX
DownloadVisualize
BU of 7frx by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 5
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, N-{[4-(3,4-dihydroxybenzene-1-sulfonyl)phenyl]methyl}-3,4-dihydroxybenzene-1-sulfonamide, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.847 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023
7FS0
DownloadVisualize
BU of 7fs0 by Molmil
Structure of liver pyruvate kinase in complex with allosteric modulator 8
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 3,4-dihydroxy-N-{2-[4-(3-hydroxybenzene-1-sulfonyl)phenyl]ethyl}benzene-1-sulfonamide, MAGNESIUM ION, ...
Authors:Lulla, A, Nilsson, O, Brear, P, Nain-Perez, A, Grotli, M, Hyvonen, M.
Deposit date:2022-12-18
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.412 Å)
Cite:Tuning liver pyruvate kinase activity up or down with a new class of allosteric modulators.
Eur.J.Med.Chem., 250, 2023

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon