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PDB: 247 results

6NBI
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BU of 6nbi by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
7KBV
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BU of 7kbv by Molmil
Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking sequence
Descriptor: Myc2345
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
7KBW
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BU of 7kbw by Molmil
Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking in complex with NSC85697, a quinoline derivative
Descriptor: 2-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-1-methyl-quinoline-4-carboxamide, Myc2345
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
6NBH
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BU of 6nbh by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
7KBX
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BU of 7kbx by Molmil
Solution structure of the major MYC promoter G-quadruplex in complex with NSC85697, a quinoline derivative
Descriptor: 2-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-1-methyl-quinoline-4-carboxamide, Myc2345_T23
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
1R42
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BU of 1r42 by Molmil
Native Human Angiotensin Converting Enzyme-Related Carboxypeptidase (ACE2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ZINC ION, ...
Authors:Towler, P, Staker, B, Prasad, S.G, Menon, S, Ryan, D, Tang, J, Parsons, T, Fisher, M, Williams, D, Dales, N.A, Patane, M.A, Pantoliano, M.W.
Deposit date:2003-10-07
Release date:2004-02-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:ACE2 X-ray structures reveal a large hinge-bending motion important for inhibitor binding and catalysis.
J.Biol.Chem., 279, 2004
1R4L
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BU of 1r4l by Molmil
Inhibitor Bound Human Angiotensin Converting Enzyme-Related Carboxypeptidase (ACE2)
Descriptor: (S,S)-2-{1-CARBOXY-2-[3-(3,5-DICHLORO-BENZYL)-3H-IMIDAZOL-4-YL]-ETHYLAMINO}-4-METHYL-PENTANOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Towler, P, Staker, B, Prasad, S.G, Menon, S, Ryan, D, Tang, J, Parsons, T, Fisher, M, Williams, D, Dales, N.A, Patane, M.A, Pantoliano, M.W.
Deposit date:2003-10-07
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:ACE2 X-ray structures reveal a large hinge-bending motion important for inhibitor binding and catalysis.
J.Biol.Chem., 279, 2004
2ML7
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BU of 2ml7 by Molmil
Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
Descriptor: Specific abundant protein 3
Authors:Wang, S, Nguyen, K, Luo, S, Tam, J, Yang, D.
Deposit date:2014-02-20
Release date:2015-03-04
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
To be Published
2LYI
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BU of 2lyi by Molmil
Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana
Descriptor: PROTEIN (entity)
Authors:Wang, S, Huang, W, Yang, D.
Deposit date:2012-09-18
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana
J.Biomol.Nmr, 54, 2012
5XXA
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BU of 5xxa by Molmil
beta-1,4-mannanase-SeMet-RmMan134A
Descriptor: endo-1,4-beta-mannanase
Authors:Jiang, Z.Q, You, X, Yang, D, Huang, P.
Deposit date:2017-07-03
Release date:2018-07-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of endo-1,4-beta-mannanase at 1.76 Angstroms resolution.
To Be Published
5WVP
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BU of 5wvp by Molmil
Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii
Descriptor: Beta-glucosidase, beta-D-mannopyranose
Authors:Jiang, Z, Wu, S, Yang, D, Qin, Z, You, X, Huang, P.
Deposit date:2016-12-28
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii
To Be Published
4JCM
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BU of 4jcm by Molmil
Crystal structure of Gamma-CGTASE from Alkalophilic bacillus clarkii at 1.65 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Wu, L, Yang, D, Zhou, J, Wu, J, Chen, J.
Deposit date:2013-02-22
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Gamma-Cgtase from Alkalophilic Bacillus Clarkii at 1.65 Angstrom Resolution.
To be Published
2H25
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BU of 2h25 by Molmil
Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin
Descriptor: Maltose-binding periplasmic protein
Authors:Xu, Y, Lin, Z, Zheng, Y, Yang, D.
Deposit date:2006-05-18
Release date:2006-10-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006
8F0V
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BU of 8f0v by Molmil
Lipocalin-like Milk protein-2 - E38A mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein, ZINC ION
Authors:Subramanian, R, KanagaVijayan, D.
Deposit date:2022-11-04
Release date:2023-08-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
8F0Y
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BU of 8f0y by Molmil
Lipocalin-like Milk protein-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein
Authors:Subramanian, R, KanagaVijayan, D, Shantakumar, R.P.S.
Deposit date:2022-11-04
Release date:2023-08-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
9IVM
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BU of 9ivm by Molmil
Cryo-EM structure of the GLP-1(9-36)-bound human GLP-1R-Gs complex in the presence of LSN3318839
Descriptor: (2~{R})-2-[2-[1-[(1~{R})-1-[2,6-bis(chloranyl)-3-cyclopropyl-phenyl]ethyl]imidazo[4,5-c]pyridin-6-yl]phenyl]propanoic acid, GLP-1(9-36), Glucagon-like peptide 1 receptor, ...
Authors:Li, J, Li, G, Mai, Y, Liu, X, Yang, D, Zhou, Q, Wang, M.-W.
Deposit date:2024-07-24
Release date:2024-11-13
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Molecular basis of enhanced GLP-1 signaling mediated by GLP-1(9–36) in conjunction with LSN3318839
Acta Pharm Sin B, 2024
2LBY
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BU of 2lby by Molmil
G-quadruplex structure formed at the 5'-end of NHEIII_1 element in human c-MYC promoter
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3')
Authors:Mathad, R, Hatzakis, E, Yang, D.
Deposit date:2011-04-07
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:c-MYC promoter G-quadruplex formed at the 5'-end of NHE III1 element: insights into biological relevance and parallel-stranded G-quadruplex stability.
Nucleic Acids Res., 39, 2011
7VU7
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BU of 7vu7 by Molmil
The Solution structure of the C-terminal domain from flagelliform spidroin
Descriptor: Flagelliform fibroin
Authors:Fan, J.S, Yang, D.
Deposit date:2021-11-01
Release date:2022-04-06
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:C-Terminal Domains of Spider Silk Proteins Having Divergent Structures but Conserved Functional Roles.
Biomacromolecules, 23, 2022
2H35
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BU of 2h35 by Molmil
Solution structure of Human normal adult hemoglobin
Descriptor: Hemoglobin alpha subunit, Hemoglobin beta subunit, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fan, J.S, Yang, D.
Deposit date:2006-05-22
Release date:2006-11-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006
2K3Q
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BU of 2k3q by Molmil
Solution structure of the n-terminal domain (TUSP1-N) of the egg case silk from Nephila antipodiana
Descriptor: TuSp1
Authors:Lin, Z, Huang, W, Fan, J, Yang, D.
Deposit date:2008-05-15
Release date:2009-06-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
2L9F
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BU of 2l9f by Molmil
NMR solution structure of meACP
Descriptor: CalE8
Authors:Lim, J, Yang, D, Liang, Z.X, Kong, R, Murugan, E, Ho, C.L.
Deposit date:2011-02-08
Release date:2011-06-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of the acyl carrier protein domain from the highly reducing type I iterative polyketide synthase CalE8
Plos One, 6, 2011
2KBE
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BU of 2kbe by Molmil
solution structure of amino-terminal domain of Dbp5p
Descriptor: ATP-dependent RNA helicase DBP5
Authors:Fan, J.S, Zhang, J, Yang, D.
Deposit date:2008-11-27
Release date:2009-10-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides.
J.Mol.Biol., 388, 2009
2K3P
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BU of 2k3p by Molmil
Solution structure of the C-terminal domain (TUSP1-C) of the egg case silk from Nephila antipodiana
Descriptor: TuSp1
Authors:Lin, Z, Huang, W, Fan, J, Yang, D.
Deposit date:2008-05-15
Release date:2009-06-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
2JPZ
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BU of 2jpz by Molmil
Human telomere DNA quadruplex structure in K+ solution hybrid-2 form
Descriptor: DNA (26-MER)
Authors:Dai, J, Carver, M, Punchihewa, C, Jones, R, Yang, D.
Deposit date:2007-05-25
Release date:2007-12-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence
Nucleic Acids Res., 35, 2007
2L7V
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BU of 2l7v by Molmil
Quindoline/G-quadruplex complex
Descriptor: DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3'), N,N-diethyl-N'-(10H-indolo[3,2-b]quinolin-11-yl)ethane-1,2-diamine, POTASSIUM ION
Authors:Dai, J, Carver, M, Mathad, R, Yang, D.
Deposit date:2010-12-23
Release date:2011-11-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a 2:1 Quindoline-c-MYC G-Quadruplex: Insights into G-Quadruplex-Interactive Small Molecule Drug Design.
J.Am.Chem.Soc., 133, 2011

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PDB entries from 2024-11-13

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