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PDB: 607 results

6O9M
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BU of 6o9m by Molmil
Structure of the human apo TFIIH
Descriptor: CDK-activating kinase assembly factor MAT1, General transcription factor IIH subunit 1, General transcription factor IIH subunit 2, ...
Authors:Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
Deposit date:2019-03-14
Release date:2019-05-29
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
6O9L
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BU of 6o9l by Molmil
Human holo-PIC in the closed state
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
Deposit date:2019-03-14
Release date:2019-05-29
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
5GM6
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BU of 5gm6 by Molmil
Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cold sensitive U2 snRNA suppressor 1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Yan, C, Wan, R, Bai, R, Huang, G, Shi, Y.
Deposit date:2016-07-12
Release date:2016-09-21
Last modified:2024-11-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of a yeast activated spliceosome at 3.5 angstrom resolution
Science, 353, 2016
7E27
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BU of 7e27 by Molmil
Structure of PfFNT in complex with MMV007839
Descriptor: (Z)-4,4,5,5,5-pentakis(fluoranyl)-1-(4-methoxy-2-oxidanyl-phenyl)-3-oxidanyl-pent-2-en-1-one, Formate-nitrite transporter
Authors:Yan, C.Y, Jiang, X, Deng, D, Peng, X, Wang, N, Zhu, A, Xu, H, Li, J.
Deposit date:2021-02-04
Release date:2021-08-18
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Structural characterization of the Plasmodium falciparum lactate transporter PfFNT alone and in complex with antimalarial compound MMV007839 reveals its inhibition mechanism.
Plos Biol., 19, 2021
7E26
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BU of 7e26 by Molmil
Structure of PfFNT in apo state
Descriptor: Formate-nitrite transporter
Authors:Yan, C.Y, Jiang, X, Deng, D, Peng, X, Wang, N, Zhu, A, Xu, H, Li, J.
Deposit date:2021-02-04
Release date:2021-08-18
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Structural characterization of the Plasmodium falciparum lactate transporter PfFNT alone and in complex with antimalarial compound MMV007839 reveals its inhibition mechanism.
Plos Biol., 19, 2021
5WSG
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BU of 5wsg by Molmil
Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution
Descriptor: 3'-exon-intron, 3'-intron-lariat, 5'-exon, ...
Authors:Yan, C, Wan, R, Bai, R, Huang, G, Shi, Y.
Deposit date:2016-12-07
Release date:2017-01-25
Last modified:2024-11-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of a yeast step II catalytically activated spliceosome
Science, 355, 2017
3JB9
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BU of 3jb9 by Molmil
Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yan, C, Hang, J, Wan, R, Huang, M, Wong, C, Shi, Y.
Deposit date:2015-08-09
Release date:2015-09-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of a yeast spliceosome at 3.6-angstrom resolution
Science, 349, 2015
8HGK
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BU of 8hgk by Molmil
Crystal structure of human ClpP in complex with ZK53
Descriptor: 4-[[3,5-bis(fluoranyl)phenyl]methyl]-N-[(4-bromophenyl)methyl]piperazine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit, mitochondrial, ...
Authors:Yang, C.-G, Gan, J.H, Zhou, L.-L.
Deposit date:2022-11-14
Release date:2023-09-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selective activator of human ClpP triggers cell cycle arrest to inhibit lung squamous cell carcinoma.
Nat Commun, 14, 2023
7AYE
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BU of 7aye by Molmil
Crystal structure of the computationally designed chemically disruptable heterodimer LD6-MDM2
Descriptor: Isoform 11 of E3 ubiquitin-protein ligase Mdm2, Thiol:disulfide interchange protein DsbD
Authors:Yang, C, Lau, K, Pojer, F, Correia, B.E.
Deposit date:2020-11-12
Release date:2021-08-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A rational blueprint for the design of chemically-controlled protein switches.
Nat Commun, 12, 2021
6YWD
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BU of 6ywd by Molmil
De novo designed protein 4H_01 in complex with Mota antibody
Descriptor: Antibody Mota, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6YWC
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BU of 6ywc by Molmil
De novo designed protein 4E1H_95 in complex with 101F antibody
Descriptor: Antibody 101F, Heavy Chain, light chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6IHU
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BU of 6ihu by Molmil
Crystal structure of bacterial serine phosphatase bearing R161A mutation
Descriptor: MAGNESIUM ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHV
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BU of 6ihv by Molmil
Crystal structure of bacterial serine phosphatase bearing R161E mutation
Descriptor: MAGNESIUM ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHR
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BU of 6ihr by Molmil
Crystal structure of bacterial serine phosphatase with His tag
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHS
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BU of 6ihs by Molmil
Crystal structure of bacterial serine phosphatase with His-tag mutation
Descriptor: MAGNESIUM ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHW
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BU of 6ihw by Molmil
Crystal structure of bacterial serine phosphatase bearing R161K mutation
Descriptor: MAGNESIUM ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHT
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BU of 6iht by Molmil
Crystal structure of bacterial serine phosphatase bound with phosphorylated peptide
Descriptor: His12, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Yang, C.-G, yang, T.
Deposit date:2018-10-02
Release date:2019-08-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.569 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6IHL
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BU of 6ihl by Molmil
Crystal structure of bacterial serine phosphatase
Descriptor: MAGNESIUM ION, Phosphorylated protein phosphatase
Authors:Yang, C.-G, yang, T.
Deposit date:2018-09-30
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.573 Å)
Cite:Structural Insight into the Mechanism of Staphylococcus aureus Stp1 Phosphatase.
Acs Infect Dis., 5, 2019
6XXV
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BU of 6xxv by Molmil
Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
Descriptor: Antibody C57, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Correia, B.E, Pojer, F.
Deposit date:2020-01-28
Release date:2020-04-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.20116425 Å)
Cite:De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
5ZF2
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BU of 5zf2 by Molmil
Crystal structure of Trxlp from Edwardsiella tarda EIB202
Descriptor: SULFATE ION, Thioredoxin (H-type,TRX-H)
Authors:Yang, C, Quan, S.
Deposit date:2018-03-02
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The Edwardsiella piscicida thioredoxin-like protein inhibits ASK1-MAPKs signaling cascades to promote pathogenesis during infection.
Plos Pathog., 15, 2019
5WYO
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BU of 5wyo by Molmil
Solution structure of E.coli HdeA
Descriptor: Acid stress chaperone HdeA
Authors:Yang, C, Hu, Y, Jin, C.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017
3J17
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BU of 3j17 by Molmil
Structure of a transcribing cypovirus by cryo-electron microscopy
Descriptor: Structural protein VP3, Structural protein VP5, VP1
Authors:Yang, C, Ji, G, Liu, H, Zhang, K, Liu, G, Sun, F, Zhu, P, Cheng, L.
Deposit date:2011-12-25
Release date:2012-04-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a transcribing cypovirus.
Proc.Natl.Acad.Sci.USA, 109, 2012
4QKN
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BU of 4qkn by Molmil
Crystal structure of FTO bound to a selective inhibitor
Descriptor: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, GLYCEROL, ...
Authors:Yang, C.-G, Huang, Y, Gan, J.
Deposit date:2014-06-07
Release date:2014-12-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Meclofenamic acid selectively inhibits FTO demethylation of m6A over ALKBH5.
Nucleic Acids Res., 43, 2015
7V6K
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BU of 7v6k by Molmil
Crystal structure of Sortase A from Streptococcus pyogenes in complex with ML346
Descriptor: 5-[3-(4-methoxyphenyl)prop-2-enylidene]-1,3-diazinane-2,4,6-trione, MAGNESIUM ION, Sortase
Authors:Yang, C.G, Gan, J.
Deposit date:2021-08-20
Release date:2021-12-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Covalent sortase A inhibitor ML346 prevents Staphylococcus aureus infection of Galleria mellonella.
Rsc Med Chem, 13, 2022
3DFG
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BU of 3dfg by Molmil
Crystal Structure of RecX: A Potent Inhibitor Protein of RecA from Xanthomonas campestris
Descriptor: Regulatory protein recX
Authors:Yang, C.Y.
Deposit date:2008-06-12
Release date:2008-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of RecX: a potent regulatory protein of RecA from Xanthomonas campestris.
Proteins, 74, 2009

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