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PDB: 13 results

7AYE
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BU of 7aye by Molmil
Crystal structure of the computationally designed chemically disruptable heterodimer LD6-MDM2
Descriptor: Isoform 11 of E3 ubiquitin-protein ligase Mdm2, Thiol:disulfide interchange protein DsbD
Authors:Yang, C, Lau, K, Pojer, F, Correia, B.E.
Deposit date:2020-11-12
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A rational blueprint for the design of chemically-controlled protein switches.
Nat Commun, 12, 2021
6IWB
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BU of 6iwb by Molmil
Crystal structure of a computationally designed protein (LD3) in complex with BCL-2
Descriptor: Apolipoprotein E, Apoptosis regulator Bcl-2,Apoptosis regulator Bcl-2, SULFATE ION
Authors:Kim, S, Kwak, M.J, Oh, B.-H, Correia, B.E, Gainza, P.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A computationally designed chimeric antigen receptor provides a small-molecule safety switch for T-cell therapy.
Nat.Biotechnol., 38, 2020
6XXV
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BU of 6xxv by Molmil
Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
Descriptor: Antibody C57, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Correia, B.E, Pojer, F.
Deposit date:2020-01-28
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.20116425 Å)
Cite:De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
6YWC
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BU of 6ywc by Molmil
De novo designed protein 4E1H_95 in complex with 101F antibody
Descriptor: Antibody 101F, Heavy Chain, light chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6YWD
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BU of 6ywd by Molmil
De novo designed protein 4H_01 in complex with Mota antibody
Descriptor: Antibody Mota, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
Deposit date:2020-04-29
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
8P49
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BU of 8p49 by Molmil
Uncharacterized Q8U0N8 protein from Pyrococcus furiosus
Descriptor: Q8U0N8 protein
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-05-19
Release date:2023-11-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8Q70
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BU of 8q70 by Molmil
tRNA pseudouridine synthase A homodimer
Descriptor: CHLORIDE ION, MAGNESIUM ION, tRNA pseudouridine synthase A
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-08-15
Release date:2023-11-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8QHP
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BU of 8qhp by Molmil
Cysteine tRNA ligase homodimer
Descriptor: Cysteine--tRNA ligase, ZINC ION
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-09-08
Release date:2023-11-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8OYS
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BU of 8oys by Molmil
De novo designed TIM barrel fold TBF_24
Descriptor: CHLORIDE ION, De novo designed TIM-barrel
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYV
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BU of 8oyv by Molmil
De novo designed Claudin fold CLF_4
Descriptor: De novo designed soluble Claudin
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYX
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BU of 8oyx by Molmil
De novo designed soluble GPCR-like fold GLF_18
Descriptor: De novo designed soluble GPCR-like protein, PHOSPHATE ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYY
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BU of 8oyy by Molmil
De novo designed soluble GPCR-like fold GLF_32
Descriptor: CHLORIDE ION, De novo designed soluble GPCR-like protein, POTASSIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024
8OYW
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BU of 8oyw by Molmil
De novo designed rhomboid protease-like fold RPF_9
Descriptor: De novo designed soluble Rhomboid protease-like protein, SODIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Computational design of soluble functional analogues of integral membrane proteins.
Biorxiv, 2024

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PDB entries from 2024-05-01

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