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PDB: 105 results

4EQA
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BU of 4eqa by Molmil
Crystal structure of PA1844 in complex with PA1845 from Pseudomonas aeruginosa PAO1
Descriptor: Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
4EQ8
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BU of 4eq8 by Molmil
Crystal structure of PA1844 from Pseudomonas aeruginosa PAO1
Descriptor: GLYCEROL, Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
6GHC
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BU of 6ghc by Molmil
Modification dependent EcoKMcrA restriction endonuclease
Descriptor: 5-methylcytosine-specific restriction enzyme A, ZINC ION
Authors:Czapinska, H, Kowalska, M, Zagorskaite, E, Manakova, E, Xu, S, Siksnys, V, Sasnauskas, G, Bochtler, M.
Deposit date:2018-05-07
Release date:2018-08-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Activity and structure of EcoKMcrA.
Nucleic Acids Res., 46, 2018
6GHS
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BU of 6ghs by Molmil
Modification dependent TagI restriction endonuclease
Descriptor: SODIUM ION, TagI restriction endonuclease, ZINC ION
Authors:Kisiala, M, Copelas, A, Czapinska, H, Xu, S, Bochtler, M.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Crystal structure of the modification-dependent SRA-HNH endonuclease TagI.
Nucleic Acids Res., 46, 2018
3TEF
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BU of 3tef by Molmil
Crystal Structure of the Periplasmic Catecholate-Siderophore Binding Protein VctP from Vibrio Cholerae
Descriptor: Iron(III) ABC transporter, periplasmic iron-compound-binding protein
Authors:Liu, X, Wang, Z, Liu, S, Li, N, Chen, Y, Zhu, C, Zhu, D, Wei, T, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-13
Release date:2012-08-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Crystal structure of periplasmic catecholate-siderophore binding protein VctP from Vibrio cholerae at 1.7 A resolution
Febs Lett., 586, 2012
3TG2
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BU of 3tg2 by Molmil
Crystal structure of the ISC domain of VibB in complex with isochorismate
Descriptor: (5S,6S)-5-[(1-carboxyethenyl)oxy]-6-hydroxycyclohexa-1,3-diene-1-carboxylic acid, TRIETHYLENE GLYCOL, Vibriobactin-specific isochorismatase
Authors:Liu, S, Zhang, C, Niu, B, Li, N, Liu, X, Liu, M, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-17
Release date:2012-08-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:Structural insight into the ISC domain of VibB from Vibrio cholerae at atomic resolution: a snapshot just before the enzymatic reaction
Acta Crystallogr.,Sect.D, 68, 2012
3TB4
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BU of 3tb4 by Molmil
Crystal structure of the ISC domain of VibB
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Liu, S, Zhang, C, Niu, B, Li, N, Liu, M, Wei, T, Zhu, D, Xu, S, Gu, L.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insight into the ISC domain of VibB from Vibrio cholerae at atomic resolution: a snapshot just before the enzymatic reaction
Acta Crystallogr.,Sect.D, 68, 2012
3O72
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BU of 3o72 by Molmil
Crystal structure of EfeB in complex with heme
Descriptor: OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, Redox component of a tripartite ferrous iron transporter
Authors:Liu, X, Du, Q, Wang, Z, Zhu, D, Huang, Y, Li, N, Xu, S, Gu, L.
Deposit date:2010-07-30
Release date:2011-03-16
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and biochemical features of EfeB/YcdB from Escherichia coli O157: ASP235 plays divergent roles in different enzyme-catalyzed processes
J.Biol.Chem., 286, 2011
5GK9
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BU of 5gk9 by Molmil
Crystal structure of human HBO1 in complex with BRPF2
Descriptor: ACETYL COENZYME *A, BRD1 protein, Histone acetyltransferase KAT7, ...
Authors:Tao, Y, Zhu, J, Xu, S, Ding, J.
Deposit date:2016-07-04
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and mechanistic insights into regulation of HBO1 histone acetyltransferase activity by BRPF2.
Nucleic Acids Res., 45, 2017
3REE
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BU of 3ree by Molmil
Crystal structure of mitoNEET
Descriptor: CDGSH iron-sulfur domain-containing protein 1, FE2/S2 (INORGANIC) CLUSTER
Authors:Funk, M.O, Arif, W, Xu, S, Mueser, T.C.
Deposit date:2011-04-04
Release date:2011-04-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Complexes of the Outer Mitochondrial Membrane Protein MitoNEET with Resveratrol-3-Sulfate.
Biochemistry, 50, 2011
3R5T
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BU of 3r5t by Molmil
Crystal structure of holo-ViuP
Descriptor: (4S,5R)-N-{3-[(2,3-dihydroxybenzoyl)amino]propyl}-2-(2,3-dihydroxyphenyl)-N-[3-({[(4S,5R)-2-(2,3-dihydroxyphenyl)-5-met hyl-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)propyl]-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxamide, 1,2-ETHANEDIOL, ACETIC ACID, ...
Authors:Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-03-19
Release date:2012-02-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
3RDE
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BU of 3rde by Molmil
Crystal structure of the catalytic domain of porcine leukocyte 12-lipoxygenase
Descriptor: 3-{4-[(tridec-2-yn-1-yloxy)methyl]phenyl}propanoic acid, Arachidonate 12-lipoxygenase, 12S-type, ...
Authors:Funk, M.O, Xu, S, Marnett, L.J, Mueser, T.C.
Deposit date:2011-04-01
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Crystal structure of 12-lipoxygenase catalytic-domain-inhibitor complex identifies a substrate-binding channel for catalysis.
Structure, 20, 2012
2KB8
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BU of 2kb8 by Molmil
The dynamic alpha-helix structure of micelle-bound human amylin.
Descriptor: Islet amyloid polypeptide
Authors:Patil, S.M, Xu, S, Sheftic, S.R, Alexandrescu, A.T.
Deposit date:2008-11-21
Release date:2009-02-24
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Dynamic alpha-helix structure of micelle-bound human amylin.
J.Biol.Chem., 284, 2009
4F5W
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BU of 4f5w by Molmil
Crystal structure of ligand free human STING CTD
Descriptor: CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
4F5Y
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BU of 4f5y by Molmil
Crystal structure of human STING CTD complex with C-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
7YQE
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BU of 7yqe by Molmil
Structure of human SRC regulatory domains in complex with the C-terminal PRRP motifs of GPR54.
Descriptor: Proto-oncogene tyrosine-protein kinase Src,KiSS-1 receptor
Authors:Song, G, Xu, S.
Deposit date:2022-08-06
Release date:2023-08-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Kisspeptin-10 binding to Gpr54 in osteoclasts prevents bone loss by activating Dusp18-mediated dephosphorylation of Src.
Nat Commun, 15, 2024
3TLQ
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BU of 3tlq by Molmil
Crystal structure of EAL-like domain protein YdiV
Descriptor: GLYCEROL, PHOSPHATE ION, Regulatory protein YdiV
Authors:Li, B, Li, N, Wang, F, Guo, L, Liu, C, Zhu, D, Xu, S, Gu, L.
Deposit date:2011-08-30
Release date:2012-09-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural insight of a concentration-dependent mechanism by which YdiV inhibits Escherichia coli flagellum biogenesis and motility
Nucleic Acids Res., 40, 2012
5VQF
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BU of 5vqf by Molmil
Crystal Structure of pro-TGF-beta 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Transforming growth factor beta-1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Zhao, B, Xu, S, Dong, X, Lu, C, Springer, T.A.
Deposit date:2017-05-08
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Prodomain-growth factor swapping in the structure of pro-TGF-beta 1.
J. Biol. Chem., 293, 2018
5VQP
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Crystal structure of human pro-TGF-beta1
Descriptor: Transforming growth factor beta-1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Zhao, B, Xu, S, Dong, X, Lu, C, Springer, T.A.
Deposit date:2017-05-09
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Prodomain-growth factor swapping in the structure of pro-TGF-beta 1.
J. Biol. Chem., 293, 2018
3R5S
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BU of 3r5s by Molmil
Crystal structure of apo-ViuP
Descriptor: Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein
Authors:Li, N, Zhang, C, Li, B, Liu, X, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-03-19
Release date:2012-02-08
Last modified:2012-05-30
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.
J.Biol.Chem., 287, 2012
3SFV
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BU of 3sfv by Molmil
Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila
Descriptor: GUANOSINE-5'-DIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
Authors:Yin, K, Lu, D, Zhu, D, Zhang, H, Li, B, Xu, S, Gu, L.
Deposit date:2011-06-14
Release date:2012-04-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural Insights into a Unique Legionella pneumophila Effector LidA Recognizing Both GDP and GTP Bound Rab1 in Their Active State
Plos Pathog., 8, 2012
5VRA
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2.35-Angstrom In situ Mylar structure of human A2A adenosine receptor at 100 K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
Authors:Broecker, J, Morizumi, T, Ou, W.-L, Klingel, V, Kuo, A, Kissick, D.J, Ishchenko, A, Lee, M.-Y, Xu, S, Makarov, O, Cherezov, V, Ogata, C.M, Ernst, O.P.
Deposit date:2017-05-10
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:High-throughput in situ X-ray screening of and data collection from protein crystals at room temperature and under cryogenic conditions.
Nat Protoc, 13, 2018
3TKL
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BU of 3tkl by Molmil
Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
Authors:Cheng, W, Yin, K, Lu, D, Li, B, Zhu, D, Chen, Y, Zhang, H, Xu, S, Chai, J, Gu, L.
Deposit date:2011-08-27
Release date:2012-06-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.183 Å)
Cite:Structural insights into a unique Legionella pneumophila effector LidA recognizing both GDP and GTP bound Rab1 in their active state
Plos Pathog., 8, 2012
3TGV
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BU of 3tgv by Molmil
Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
Descriptor: BENZOIC ACID, Heme-binding protein HutZ
Authors:Liu, X, Gong, J, Wang, Z, Du, Q, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-17
Release date:2012-08-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
To be Published
5YPS
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BU of 5yps by Molmil
The structural basis of histone chaperoneVps75
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Chen, Y, Zhang, Y, Dou, Y, Wang, M, Xu, S, Jiang, H, Limper, A, Su, D.
Deposit date:2017-11-03
Release date:2018-11-07
Last modified:2020-06-10
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Structural basis for the acetylation of histone H3K9 and H3K27 mediated by the histone chaperone Vps75 inPneumocystis carinii.
Signal Transduct Target Ther, 4, 2019

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PDB entries from 2024-06-19

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