Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 120 results

2NY1
DownloadVisualize
BU of 2ny1 by Molmil
HIV-1 gp120 Envelope Glycoprotein (I109C, T257S, S334A, S375W, Q428C) Complexed with CD4 and Antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2A35
DownloadVisualize
BU of 2a35 by Molmil
1.5 A Crystal Structure of a Protein of Unknown Function PA4017 from Pseudomonas aeruginosa PAO1, Possible Epimerase
Descriptor: hypothetical protein PA4017
Authors:Zhang, R, Xu, L, Cuff, M, Savchenko, A, Cymborowski, M, Minor, W, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-06-23
Release date:2005-08-09
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5A crystal structure of a hypothetical protein PA4017 from Pseudomonas aeruginosa PAO1
To be Published
6C8U
DownloadVisualize
BU of 6c8u by Molmil
Solution structure of Musashi2 RRM1
Descriptor: RNA-binding protein Musashi homolog 2
Authors:Xing, M, Lan, L, Douglas, J.T, Gao, P, Hanzlik, R.P, Xu, L.
Deposit date:2018-01-25
Release date:2019-01-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Crystal and solution structures of human oncoprotein Musashi-2 N-terminal RNA recognition motif 1.
Proteins, 2019
5VST
DownloadVisualize
BU of 5vst by Molmil
Crystal structure of murine CEACAM1b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Biliary glycoprotein
Authors:Peng, G, Yang, Y, Pasquarella, J.R, Xu, L, Qian, Z, Holmes, K.V, Li, F.
Deposit date:2017-05-12
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular mechanism for coronavirus-driven evolution of mouse receptor
J. Biol. Chem., 292, 2017
5WYM
DownloadVisualize
BU of 5wym by Molmil
Crystal structure of an anti-connexin26 scFv
Descriptor: anti-connexin26 scFv,Ig heavy chain,Linker,anti-connexin26 scFv,Ig light chain
Authors:Li, S, Xu, L.
Deposit date:2017-01-13
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Design and Characterization of a Human Monoclonal Antibody that Modulates Mutant Connexin 26 Hemichannels Implicated in Deafness and Skin Disorders
Front Mol Neurosci, 10, 2017
2NY4
DownloadVisualize
BU of 2ny4 by Molmil
HIV-1 gp120 Envelope Glycoprotein (K231C, T257S, E268C, S334A, S375W) Complexed with CD4 and Antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2NY7
DownloadVisualize
BU of 2ny7 by Molmil
HIV-1 gp120 Envelope Glycoprotein Complexed with the Broadly Neutralizing CD4-Binding-Site Antibody b12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY b12, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2NY3
DownloadVisualize
BU of 2ny3 by Molmil
HIV-1 gp120 Envelope Glycoprotein (K231C, T257S, E267C, S334A, S375W) Complexed with CD4 and Antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2NY2
DownloadVisualize
BU of 2ny2 by Molmil
HIV-1 gp120 Envelope Glycoprotein (T123C, T257S, S334A, S375W, G431C) Complexed with CD4 and Antibody 17b
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2NXY
DownloadVisualize
BU of 2nxy by Molmil
HIV-1 gp120 Envelope Glycoprotein(S334A) Complexed with CD4 and Antibody 17b
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
2NY0
DownloadVisualize
BU of 2ny0 by Molmil
HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
Authors:Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
Deposit date:2006-11-20
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
6KYB
DownloadVisualize
BU of 6kyb by Molmil
Crystal structure of Atg18 from Saccharomyces cerevisiae
Descriptor: Autophagy-related protein 18
Authors:Tang, D, Lei, Y, Liao, G, Chen, Q, Xu, L, Lu, K, Qi, S.
Deposit date:2019-09-17
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of Atg18 reveals a new binding site for Atg2 in Saccharomyces cerevisiae.
Cell.Mol.Life Sci., 78, 2021
6LT0
DownloadVisualize
BU of 6lt0 by Molmil
cryo-EM structure of C9ORF72-SMCR8-WDR41
Descriptor: Guanine nucleotide exchange C9orf72, Guanine nucleotide exchange protein SMCR8, WD repeat-containing protein 41
Authors:Tang, D, Sheng, J, Xu, L, Zhan, X, Yan, C, Qi, S.
Deposit date:2020-01-21
Release date:2020-04-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of C9ORF72-SMCR8-WDR41 reveals the role as a GAP for Rab8a and Rab11a.
Proc.Natl.Acad.Sci.USA, 117, 2020
8Y66
DownloadVisualize
BU of 8y66 by Molmil
Cryo-EM structure of human urate transporter GLUT9 bound to inhibitor apigenin
Descriptor: 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Solute carrier family 2, facilitated glucose transporter member 9
Authors:Pan, X.J, Shen, Z.L, Xu, L, Huang, G.X.Y.
Deposit date:2024-02-01
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structural basis for urate recognition and apigenin inhibition of human GLUT9.
Nat Commun, 15, 2024
8Y65
DownloadVisualize
BU of 8y65 by Molmil
Cryo-EM structure of human urate transporter GLUT9 bound to substrate urate
Descriptor: Solute carrier family 2, facilitated glucose transporter member 9, URIC ACID
Authors:Pan, X.J, Shen, Z.L, Xu, L, Huang, G.X.Y.
Deposit date:2024-02-01
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Structural basis for urate recognition and apigenin inhibition of human GLUT9.
Nat Commun, 15, 2024
3P2M
DownloadVisualize
BU of 3p2m by Molmil
Crystal Structure of a Novel Esterase Rv0045c from Mycobacterium tuberculosis
Descriptor: POSSIBLE HYDROLASE
Authors:Zheng, X.D, Guo, J, Xu, L, Li, H, Zhang, D, Zhang, K, Sun, F, Wen, T, Liu, S, Pang, H.
Deposit date:2010-10-03
Release date:2011-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of a Novel Esterase Rv0045c from Mycobacterium tuberculosis
Plos One, 6, 2011
3RVG
DownloadVisualize
BU of 3rvg by Molmil
Crystals structure of Jak2 with a 1-amino-5H-pyrido[4,3-b]indol-4-carboxamide inhibitor
Descriptor: 1-(cyclohexylamino)-7-(1-methyl-1H-pyrazol-4-yl)-5H-pyrido[4,3-b]indole-4-carboxamide, Tyrosine-protein kinase JAK2
Authors:Lim, J, Taoka, B, Otte, R.D, Spencer, K, Dinsmore, C.J, Altman, M.D, Chan, G, Rosenstein, C, Sharma, S, Su, H.P, Szewczak, A.A, Xu, L, Yin, H, Zugay-Murphy, J, Marshall, C.G, Young, J.R.
Deposit date:2011-05-06
Release date:2012-03-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Discovery of 1-amino-5H-pyrido[4,3-b]indol-4-carboxamide inhibitors of Janus kinase 2 (JAK2) for the treatment of myeloproliferative disorders.
J.Med.Chem., 54, 2011
7F6G
DownloadVisualize
BU of 7f6g by Molmil
Cryo-EM structure of human angiotensin receptor AT1R in complex Gq proteins and Sar1-AngII
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin receptor AT1R, CHOLESTEROL, ...
Authors:Zhang, D, Xu, L, Zhan, Y, Guo, J, Zhang, H.
Deposit date:2021-06-25
Release date:2023-03-29
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into angiotensin receptor signaling modulation by balanced and biased agonists.
Embo J., 42, 2023
7V3Q
DownloadVisualize
BU of 7v3q by Molmil
Crystal structure of anti-MUC1 antibody 16A
Descriptor: Fab 16A Heavy Chain, Fab 16A Light Chain
Authors:Niu, J, Xu, L, Meng, B, Han, Y.B, Yang, B.
Deposit date:2021-08-11
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
To Be Published
7UIM
DownloadVisualize
BU of 7uim by Molmil
CryoEM Structure of an Group II Intron Retroelement (apo-complex)
Descriptor: AMMONIUM ION, E.r IIC Intron, Group II intron reverse transcriptase/maturase, ...
Authors:Chung, K, Xu, L.
Deposit date:2022-03-29
Release date:2022-11-23
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of a mobile intron retroelement poised to attack its structured DNA target
Science, 378, 2022
7UIN
DownloadVisualize
BU of 7uin by Molmil
CryoEM Structure of an Group II Intron Retroelement
Descriptor: AMMONIUM ION, DNA (37-MER), E.r IIC Intron, ...
Authors:Chung, K, Xu, L.
Deposit date:2022-03-29
Release date:2022-11-23
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of a mobile intron retroelement poised to attack its structured DNA target
Science, 378, 2022
7V7K
DownloadVisualize
BU of 7v7k by Molmil
Crystal structure of Antibody 16A in complex with MUC1 Glycopeptide(GlycoST)
Descriptor: 16A fab heavy chain, 16A fab light chain, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Niu, J, Xu, L, Meng, B, Han, Y.B, Yang, B.
Deposit date:2021-08-21
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
To Be Published
7V64
DownloadVisualize
BU of 7v64 by Molmil
Crystal structure of Antibody 16A in complex with MUC1 Glycopeptide(GlycoT)
Descriptor: 16A fab Heavy chain, 16A fab Light chain, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Niu, J, Xu, L, Meng, B, Han, Y.B, Yang, B.
Deposit date:2021-08-19
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
To Be Published
7V8Q
DownloadVisualize
BU of 7v8q by Molmil
Crystal structure of antibody 14A in complex with MUC1 Glycopeptide(GlycoT)
Descriptor: 14A fab heavy chain, 14A fab light chain, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Niu, J, Xu, L, Meng, B, Han, Y.B, Yang, B.
Deposit date:2021-08-23
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
To Be Published
7VAC
DownloadVisualize
BU of 7vac by Molmil
Crystal structure of antibody 14A in complex with MUC1 glycopeptide(GlycoST)
Descriptor: 14A fab heavy chain, 14A fab light chain, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Niu, J, Xu, L, Meng, B, Han, Y.B, Yang, B.
Deposit date:2021-08-28
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
To Be Published

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon