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PDB: 592 results

6LBS
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BU of 6lbs by Molmil
Crystal structure of yeast Stn1
Descriptor: KLLA0C11825p
Authors:Ge, Y, Wu, Z, Wu, J, Lei, M.
Deposit date:2019-11-14
Release date:2020-07-15
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into telomere protection and homeostasis regulation by yeast CST complex.
Nat.Struct.Mol.Biol., 27, 2020
5DNO
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BU of 5dno by Molmil
Crystal structure of Mmi1 YTH domain complex with RNA
Descriptor: RNA (5'-R(*CP*UP*UP*AP*AP*AP*C)-3'), YTH domain-containing protein mmi1
Authors:Wang, C.Y, Zhu, Y.W, Wu, J.H, Shi, Y.Y.
Deposit date:2015-09-10
Release date:2016-04-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel RNA-binding mode of the YTH domain reveals the mechanism for recognition of determinant of selective removal by Mmi1
Nucleic Acids Res., 44, 2016
6A91
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Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
6A95
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BU of 6a95 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Descriptor: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
1SDZ
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BU of 1sdz by Molmil
Crystal structure of DIAP1 BIR1 bound to a Reaper peptide
Descriptor: Apoptosis 1 inhibitor, Reaper, ZINC ION
Authors:Yan, N, Wu, J.W, Shi, Y.
Deposit date:2004-02-15
Release date:2004-04-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Molecular mechanisms of DrICE inhibition by DIAP1 and removal of inhibition by Reaper, Hid and Grim.
Nat.Struct.Mol.Biol., 11, 2004
4HPT
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BU of 4hpt by Molmil
Crystal structure of the catalytic subunit of cAMP-dependent protein kinase displaying complete phosphoryl transfer of AMP-PNP onto a substrate peptide
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Bastidas, A.C, Steichen, J.M, Wu, J, Taylor, S.S.
Deposit date:2012-10-24
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Phosphoryl transfer by protein kinase a is captured in a crystal lattice.
J.Am.Chem.Soc., 135, 2013
4HPU
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BU of 4hpu by Molmil
Crystal structure of the catalytic subunit of cAMP-dependent protein kinase displaying partial phosphoryl transfer of AMP-PNP onto a substrate peptide
Descriptor: MAGNESIUM ION, MYRISTIC ACID, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Bastidas, A.C, Steichen, J.M, Wu, J, Taylor, S.S.
Deposit date:2012-10-24
Release date:2013-03-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Phosphoryl transfer by protein kinase a is captured in a crystal lattice.
J.Am.Chem.Soc., 135, 2013
3T7J
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BU of 3t7j by Molmil
Crystal structure of Rtt107p (residues 820-1070)
Descriptor: Regulator of Ty1 transposition protein 107
Authors:Li, X, Li, F, Wu, J, Shi, Y.
Deposit date:2011-07-30
Release date:2012-02-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
5GL0
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BU of 5gl0 by Molmil
Structure of RyR1 in a closed state (C4 conformer)
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
Deposit date:2016-07-07
Release date:2016-08-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
5GKZ
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BU of 5gkz by Molmil
Structure of RyR1 in a closed state (C3 conformer)
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
Deposit date:2016-07-07
Release date:2016-08-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
2MWN
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BU of 2mwn by Molmil
Talin-F3 / RIAM N-terminal Peptide complex
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1-interacting protein, Talin-1
Authors:Yang, J, Zhu, L, Zhang, H, Hirbawi, J, Fukuda, K, Dwivedi, P, Liu, J, Byzova, T, Plow, E.F, Wu, J, Qin, J.
Deposit date:2014-11-13
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformational activation of talin by RIAM triggers integrin-mediated cell adhesion.
Nat Commun, 5, 2014
5GL1
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BU of 5gl1 by Molmil
Structure of RyR1 in an open state
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
Deposit date:2016-07-07
Release date:2016-08-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
5GKY
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BU of 5gky by Molmil
Structure of RyR1 in a closed state (C1 conformer)
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
Deposit date:2016-07-07
Release date:2016-08-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
4GNG
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BU of 4gng by Molmil
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3K9me3 peptide
Descriptor: GLYCEROL, Histone H3.3, Histone-lysine N-methyltransferase NSD3, ...
Authors:Li, F, He, C, Wu, J, Shi, Y.
Deposit date:2012-08-17
Release date:2013-01-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
5XUP
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BU of 5xup by Molmil
Crystal structure of TRF1 and TERB1
Descriptor: Telomere repeats-binding bouquet formation protein 1, Telomeric repeat-binding factor 1
Authors:Long, J, Huang, C, Wu, J, Lei, M.
Deposit date:2017-06-24
Release date:2017-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Telomeric TERB1-TRF1 interaction is crucial for male meiosis.
Nat. Struct. Mol. Biol., 24, 2017
7E34
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BU of 7e34 by Molmil
Crystal structure of SUN1-Speedy A-CDK2
Descriptor: Cyclin-dependent kinase 2, GLYCEROL, SUN domain-containing protein 1, ...
Authors:Chen, Y, Huang, C, Wu, J, Lei, M.
Deposit date:2021-02-08
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:The SUN1-SPDYA interaction plays an essential role in meiosis prophase I.
Nat Commun, 12, 2021
3T7K
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BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
Descriptor: Histone H2A.1, Regulator of Ty1 transposition protein 107
Authors:Li, X, Li, F, Wu, J, Shi, Y.
Deposit date:2011-07-30
Release date:2012-02-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
6A90
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BU of 6a90 by Molmil
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana and Dc1a
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Mu-diguetoxin-Dc1a, ...
Authors:Shen, H.Z, li, Z.Q, Jiang, Y, Pan, X.J, Wu, J.P, Cristofori-Armstrong, B, Smith, J.J, Chin, Y.K.Y, Lei, J.L, Zhou, Q, King, G.F, Yan, N.
Deposit date:2018-07-11
Release date:2018-08-08
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for the modulation of voltage-gated sodium channels by animal toxins.
Science, 362, 2018
2GJ2
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BU of 2gj2 by Molmil
Crystal Structure of VP9 from White Spot Syndrome Virus
Descriptor: CADMIUM ION, wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
4NS5
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BU of 4ns5 by Molmil
Crystal structure of human BS69 Bromo-Zinc finger-PWWP
Descriptor: ZINC ION, Zinc finger MYND domain-containing protein 11
Authors:Wang, J.C, Qin, S, Li, F.D, Li, S, Zhang, W, Wu, J.H, Shi, Y.Y.
Deposit date:2013-11-28
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding.
Cell Res., 24, 2014
1SG0
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BU of 1sg0 by Molmil
Crystal structure analysis of QR2 in complex with resveratrol
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NRH dehydrogenase [quinone] 2, RESVERATROL, ...
Authors:Buryanovskyy, L, Fu, Y, Boyd, M, Ma, Y, Tsieh, T.C, Wu, J.M, Zhang, Z.
Deposit date:2004-02-22
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of quinone reductase 2 in complex with resveratrol
Biochemistry, 43, 2004
2GJI
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BU of 2gji by Molmil
NMR solution structure of VP9 from White Spot Syndrome Virus
Descriptor: wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
2AIN
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BU of 2ain by Molmil
Solution structure of the AF-6 PDZ domain complexed with the C-terminal peptide from the Bcr protein
Descriptor: 6-mer peptide from Breakpoint cluster region protein, Afadin
Authors:Chen, Q, Wu, J, Shi, Y.
Deposit date:2005-07-30
Release date:2006-07-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the AF-6 PDZ domain/Bcr peptide complex.
Protein Sci., 16, 2007
2QUR
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BU of 2qur by Molmil
Crystal Structure of F327A/K285P Mutant of cAMP-dependent Protein Kinase
Descriptor: 20-mer fragment from cAMP-dependent protein kinase inhibitor alpha, ADENOSINE-5'-DIPHOSPHATE, cAMP-dependent protein kinase, ...
Authors:Taylor, S.S, Yang, J, Wu, J.
Deposit date:2007-08-06
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Contribution of non-catalytic core residues to activity and regulation in protein kinase A.
J.Biol.Chem., 284, 2009
8YZN
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BU of 8yzn by Molmil
Crystal structural analysis of PaL
Descriptor: Lipase
Authors:Xu, G, Wu, J.
Deposit date:2024-04-07
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Crystal structural analysis of PaL
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