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PDB: 484 results

4U7T
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BU of 4u7t by Molmil
Crystal structure of DNMT3A-DNMT3L in complex with histone H3
Descriptor: DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3A, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Guo, X, Wang, L, Yin, X, Li, J, Xiao, J, He, S, Wang, J, Xu, Y.
Deposit date:2014-07-31
Release date:2014-11-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insight into autoinhibition and histone H3-induced activation of DNMT3A
Nature, 517, 2015
4WQN
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BU of 4wqn by Molmil
Crystal structure of N6-methyladenosine RNA reader YTHDF2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, YTH domain-containing family protein 2
Authors:Zhu, T, Roundtree, I.A, Wang, P, Wang, X, Wang, L, Sun, C, Tian, Y, Li, J, He, C, Xu, Y.
Deposit date:2014-10-22
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.121 Å)
Cite:Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine.
Cell Res., 24, 2014
4WGI
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BU of 4wgi by Molmil
A Single Diastereomer of a Macrolactam Core Binds Specifically to Myeloid Cell Leukemia 1 (MCL1)
Descriptor: (2S)-2-[(2S,3R)-10-{[(4-fluorophenyl)sulfonyl]amino}-3-methyl-2-[(methyl{[4-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]-6-oxo-3,4-dihydro-2H-1,5-benzoxazocin-5(6H)-yl]propanoic acid, FORMIC ACID, MAGNESIUM ION, ...
Authors:Clifton, M.C, Fairman, J.W, Fang, C, D'Souza, B, Fulroth, B, Leed, A, McCarren, P, Wang, L, Wang, Y, Kaushik, V, Palmer, M, Wei, G, Golub, T.R, Hubbard, B.K, Serrano-Wu, M.H.
Deposit date:2014-09-18
Release date:2014-11-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Single Diastereomer of a Macrolactam Core Binds Specifically to Myeloid Cell Leukemia 1 (MCL1).
Acs Med.Chem.Lett., 5, 2014
4WUM
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BU of 4wum by Molmil
X-ray crystal structure of Chalcone Synthase from Freesia hybrida
Descriptor: Chalcone synthase
Authors:Almqvist, J, Jiang, W.S, Wang, L, Huang, Y.
Deposit date:2014-11-02
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular and Biochemical Analysis of Chalcone Synthase from Freesia hybrid in Flavonoid Biosynthetic Pathway.
Plos One, 10, 2015
1NI1
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BU of 1ni1 by Molmil
Imidazole and cyanophenyl farnesyl transferase inhibitors
Descriptor: 2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)- METHOXYMETHYL]-NICOTINONITRILE, ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID, Protein farnesyltransferase alpha subunit, ...
Authors:Tong, Y, Lin, N.H, Wang, L, Hasvold, L, Wang, W, Leonard, N, Li, T, Li, Q, Cohen, J, Gu, W.Z, Zhang, H, Stoll, V, Bauch, J, Marsh, K, Rosenberg, S.H, Sham, H.L.
Deposit date:2002-12-20
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of potent imidazole and cyanophenyl containing farnesyltransferase inhibitors with improved oral bioavailability.
Bioorg.Med.Chem.Lett., 13, 2003
4V9C
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BU of 4v9c by Molmil
Allosteric control of the ribosome by small-molecule antibiotics
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Cate, J.H.D, Pulk, A, Blanchard, S.C, Wang, L, Feldman, M.B, Wasserman, M.R, Altman, R.
Deposit date:2012-07-25
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Allosteric control of the ribosome by small-molecule antibiotics.
Nat.Struct.Mol.Biol., 19, 2012
4V9D
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BU of 4v9d by Molmil
Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Dunkle, J.A, Wang, L, Feldman, M.B, Pulk, A, Chen, V.B, Kapral, G.J, Noeske, J, Richardson, J.S, Blanchard, S.C, Cate, J.H.D.
Deposit date:2012-07-31
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of the bacterial ribosome in classical and hybrid states of tRNA binding.
Science, 332, 2011
8WY4
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BU of 8wy4 by Molmil
GajA tetramer with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-10-30
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8X51
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BU of 8x51 by Molmil
Cryo-EM structure of Gabija GajA in complex with DNA(focused refinement)
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*AP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*TP*AP*TP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*TP*AP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*TP*TP*TP*T)-3'), ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-16
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8X5I
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BU of 8x5i by Molmil
tetramer Gabija with ATP (local refinement)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA, MAGNESIUM ION
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-17
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8WY5
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BU of 8wy5 by Molmil
Structure of Gabija GajA in complex with DNA
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*TP*AP*TP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*AP*TP*AP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*TP*TP*T)-3'), ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-10-30
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8X5N
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BU of 8x5n by Molmil
Tetramer Gabija with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA, Gabija protein GajB, ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-17
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
6PT0
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BU of 6pt0 by Molmil
Cryo-EM structure of human cannabinoid receptor 2-Gi protein in complex with agonist WIN 55,212-2
Descriptor: CHOLESTEROL, Cannabinoid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Xu, T.H, Xing, C, Zhuang, Y, Feng, Z, Zhou, X.E, Chen, M, Wang, L, Meng, X, Xue, Y, Wang, J, Liu, H, McGuire, T, Zhao, G, Melcher, K, Zhang, C, Xu, H.E, Xie, X.Q.
Deposit date:2019-07-14
Release date:2020-02-12
Last modified:2020-03-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM Structure of the Human Cannabinoid Receptor CB2-GiSignaling Complex.
Cell, 180, 2020
8V6U
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BU of 8v6u by Molmil
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking
Descriptor: 4-{(3R)-1-[(1R)-1-(pyrimidin-2-yl)ethyl]piperidin-3-yl}phenol, 5-hydroxytryptamine receptor 2A, G protein alpha-subunit q (Gi2-mini-Gq chimera), ...
Authors:Gumpper, R.H, Wang, L, Kapolka, N, Skiniotis, G, Roth, B.L.
Deposit date:2023-12-03
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:AlphaFold2 structures guide prospective ligand discovery.
Science, 2024
6P6W
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BU of 6p6w by Molmil
Cryo-EM structure of voltage-gated sodium channel NavAb N49K/L109A/M116V/G94C/Q150C disulfide crosslinked mutant in the resting state
Descriptor: Fusion of Maltose-binding protein and voltage-gated sodium channel NavAb
Authors:Wisedchaisri, G, Tonggu, L, McCord, E, Gamal El-Din, T.M, Wang, L, Zheng, N, Catterall, W.A.
Deposit date:2019-06-04
Release date:2019-08-14
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Resting-State Structure and Gating Mechanism of a Voltage-Gated Sodium Channel.
Cell, 178, 2019
6P6Y
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BU of 6p6y by Molmil
Crystal structure of voltage-gated sodium channel NavAb V100C/Q150C disulfide crosslinked mutant in the activated state
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Ion transport protein
Authors:Wisedchaisri, G, Tonggu, L, McCord, E, Gamal El-din, T.M, Wang, L, Zheng, N, Catterall, W.A.
Deposit date:2019-06-04
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Resting-State Structure and Gating Mechanism of a Voltage-Gated Sodium Channel.
Cell, 178, 2019
6P6X
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BU of 6p6x by Molmil
Crystal structure of voltage-gated sodium channel NavAb G94C/Q150C mutant in the activated state
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Ion transport protein
Authors:Wisedchaisri, G, Tonggu, L, McCord, E, Gamal El-Din, T.M, Wang, L, Zheng, N, Catterall, W.A.
Deposit date:2019-06-04
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Resting-State Structure and Gating Mechanism of a Voltage-Gated Sodium Channel.
Cell, 178, 2019
8KDB
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BU of 8kdb by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
8KDC
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BU of 8kdc by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
2ZGJ
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BU of 2zgj by Molmil
Crystal Structure of D86N-GzmM Complexed with Its Optimal Synthesized Substrate
Descriptor: Granzyme M, SSGKVPLS, SULFATE ION
Authors:Wu, L.F, Wang, L, Hua, G.Q, Liu, K, Zhai, Y.J, Sun, F, Fan, Z.S.
Deposit date:2008-01-22
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M
J.Immunol., 183, 2009
2ZGH
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BU of 2zgh by Molmil
Crystal Structure of active granzyme M bound to its product
Descriptor: Granzyme M, SSGKVPL, SULFATE ION
Authors:Wu, L.F, Wang, L, Hua, G.Q, Liu, K, Zhai, Y.J, Sun, F, Fan, Z.S.
Deposit date:2008-01-22
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M
J.Immunol., 183, 2009
2ZKS
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BU of 2zks by Molmil
Structural insights into the proteolytic machinery of apoptosis-inducing Granzyme M
Descriptor: Granzyme M, SULFATE ION, hGzmM inhibitor
Authors:Wu, L.F, Wang, L, Hua, G.Q, Liu, K, Yang, X, Zhai, Y.J, Sun, F, Fan, Z.S.
Deposit date:2008-03-28
Release date:2009-03-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M
J.Immunol., 183, 2009
2ZGC
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BU of 2zgc by Molmil
Crystal Structure of Active Human Granzyme M
Descriptor: Granzyme M, SULFATE ION
Authors:Wu, L.F, Wang, L, Hua, G.Q, Liu, K, Zhai, Y.J, Sun, F, Fan, Z.S.
Deposit date:2008-01-21
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M
J.Immunol., 183, 2009
8JQB
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BU of 8jqb by Molmil
Structure of Gabija GajA-GajB 4:4 Complex
Descriptor: Endonuclease GajA, Gabija protein GajB
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-06-13
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
8JQC
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BU of 8jqc by Molmil
Novel Anti-phage System
Descriptor: Endonuclease GajA, Gabija protein GajB
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-06-13
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024

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