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PDB: 677 results

6JUI
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BU of 6jui by Molmil
The atypical Myb-like protein Cdc5 contains two distinct nucleic acid-binding surfaces
Descriptor: Pre-mRNA-splicing factor CEF1
Authors:Wang, C, Li, G, Li, M, Yang, J, Liu, J.
Deposit date:2019-04-14
Release date:2020-02-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Two distinct nucleic acid binding surfaces of Cdc5 regulate development.
Biochem.J., 476, 2019
2KCG
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BU of 2kcg by Molmil
Solution structure of cycloviolacin O2
Descriptor: Cycloviolacin-O2
Authors:Wang, C.K.
Deposit date:2008-12-22
Release date:2009-07-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Despite a conserved cystine knot motif, different cyclotides have different membrane binding modes.
Biophys.J., 97, 2009
7EZO
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BU of 7ezo by Molmil
GH10 domain of bifunctional endoxylanase and arabinofuranosidase of Bi0569
Descriptor: endoxylanase/arabinofuranosidase
Authors:Wang, C.Y, Liu, D.
Deposit date:2021-06-01
Release date:2022-07-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.80005527 Å)
Cite:GH10 domain of bifunctional endoxylanase and arabinofuranosidase of Bi0569
To Be Published
2KCH
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BU of 2kch by Molmil
Solution structure of micelle-bound kalata B2
Descriptor: Kalata-B2
Authors:Wang, C.K.
Deposit date:2008-12-21
Release date:2009-07-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Despite a conserved cystine knot motif, different cyclotides have different membrane binding modes.
Biophys.J., 97, 2009
8K48
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BU of 8k48 by Molmil
LTD of arabidopsis thaliana
Descriptor: Protein LHCP TRANSLOCATION DEFECT
Authors:Wang, C, Xu, X.M.
Deposit date:2023-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Arabidopsis thaliana LTD
To Be Published
3ZH9
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BU of 3zh9 by Molmil
Bacillus subtilis DNA clamp loader delta protein (YqeN)
Descriptor: DELTA, GLYCEROL, SULFATE ION
Authors:Suwannachart, C, Sedelnikova, S, Soultanas, P, Oldham, N.J, Rafferty, J.B.
Deposit date:2012-12-20
Release date:2013-04-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights Into the Structure and Assembly of the Bacillus Subtilis Clamp-Loader Complex and its Interaction with the Replicative Helicase.
Nucleic Acids Res., 41, 2013
7YCV
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BU of 7ycv by Molmil
The Dimeric Format of Truncated PrpA (2-54)and RHH Domain of PrpA
Descriptor: Antitoxin ParD
Authors:Wang, C.C, Niu, C.Y, Niu, L.W.
Deposit date:2022-07-01
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural insights into the PrpTA toxin-antitoxin system in Pseudoalteromonas rubra.
Front Microbiol, 13, 2022
7YCW
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BU of 7ycw by Molmil
Crystal Form 1 of Truncated Antitoxin ParD (2-54,containg RHH domain) from Pseudoalteromonas rubra
Descriptor: Antitoxin ParD
Authors:Wang, C.C, Niu, C.Y, Niu, L.W.
Deposit date:2022-07-01
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the PrpTA toxin-antitoxin system in Pseudoalteromonas rubra.
Front Microbiol, 13, 2022
7YCU
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BU of 7ycu by Molmil
Heterotetramer of Antitoxin PrpA together with Toxin PrpT from Pseudoalteromonas rubra
Descriptor: Antitoxin ParD, Toxin
Authors:Wang, C.C, Niu, C.Y, Niu, L.W.
Deposit date:2022-07-01
Release date:2022-09-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural insights into the PrpTA toxin-antitoxin system in Pseudoalteromonas rubra.
Front Microbiol, 13, 2022
7YCS
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BU of 7ycs by Molmil
Heterotetramer of Antitoxin PrpA together with Toxin PrpT from Pseudoalteromonas rubra
Descriptor: Antitoxin ParD, Toxin
Authors:Wang, C.C, Niu, L.W.
Deposit date:2022-07-01
Release date:2022-09-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural insights into the PrpTA toxin-antitoxin system in Pseudoalteromonas rubra.
Front Microbiol, 13, 2022
5TF8
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BU of 5tf8 by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dTTP
Descriptor: Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION, THYMIDINE-5'-TRIPHOSPHATE
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-24
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TFJ
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BU of 5tfj by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TF7
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BU of 5tf7 by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-24
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TFF
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BU of 5tff by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with UTP
Descriptor: Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TGK
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BU of 5tgk by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-28
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:Ligand binding to a remote site thermodynamically corrects the F508del mutation in the human cystic fibrosis transmembrane conductance regulator.
J. Biol. Chem., 2018
2KHB
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BU of 2khb by Molmil
Solution structure of linear kalata B1 (loop 6)
Descriptor: Kalata-B1
Authors:Wang, C.K, Craik, D.J.
Deposit date:2009-04-01
Release date:2010-03-31
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Cyclotides insert into lipid bilayers to form membrane pores and destabilize the membrane
To be Published
2KVX
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BU of 2kvx by Molmil
Solution structure of kalata B12
Descriptor: Kalata-B12
Authors:Wang, C.K.
Deposit date:2010-03-29
Release date:2011-03-09
Last modified:2016-06-01
Method:SOLUTION NMR
Cite:The role of conserved Glu residue on cyclotide stability and activity: a structural and functional study of kalata B12, a naturally occurring Glu to Asp mutant.
Biochemistry, 50, 2011
7XDG
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BU of 7xdg by Molmil
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor MDSA
Descriptor: 5-[(3-carboxy-4-oxidanyl-phenyl)methyl]-2-oxidanyl-benzoic acid, NAD-dependent malic enzyme, mitochondrial, ...
Authors:Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C.
Deposit date:2022-03-27
Release date:2023-03-29
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration
Commun Biol, 6, 2023
7XDF
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BU of 7xdf by Molmil
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in a ternary complex with NAD+ and allosteric inhibitor EA
Descriptor: 4-[(3-carboxy-2-oxidanyl-naphthalen-1-yl)methyl]-3-oxidanyl-naphthalene-2-carboxylic acid, NAD-dependent malic enzyme, mitochondrial, ...
Authors:Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C.
Deposit date:2022-03-27
Release date:2023-03-29
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration
Commun Biol, 6, 2023
7XDE
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BU of 7xde by Molmil
Cryo-EM structures of human mitochondrial NAD(P)+-dependent malic enzyme in apo form
Descriptor: NAD-dependent malic enzyme, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, C.H, Hsieh, J.T, Ho, M.C, Hung, H.C.
Deposit date:2022-03-26
Release date:2023-03-29
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Suppression of the human malic enzyme 2 modifies energy metabolism and inhibits cellular respiration
Commun Biol, 6, 2023
2K7G
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BU of 2k7g by Molmil
Solution Structure of varv F
Descriptor: Varv peptide F
Authors:Wang, C.K.
Deposit date:2008-08-10
Release date:2009-02-10
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Combined X-ray and NMR analysis of the stability of the cyclotide cystine knot fold that underpins its insecticidal activity and potential use as a drug scaffold
J.Biol.Chem., 284, 2009
7YAN
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BU of 7yan by Molmil
UDP-glucuronosyltransferase2B17 C-terminal domain
Descriptor: L(+)-TARTARIC ACID, UDP-glucuronosyltransferase 2B17
Authors:Wang, C.Y, Zhang, L.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:UDP-glucuronosyltransferase2B17 C-terminal domain
To Be Published
7ZEA
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BU of 7zea by Molmil
Crystal Structure of truncated aspartate transcarbamoylase from Plasmodium falciparum with bound inhibitor O-benzylhydroxylamine
Descriptor: Aspartate carbamoyltransferase, O-benzylhydroxylamine, SODIUM ION, ...
Authors:Wang, C, Zhang, B.
Deposit date:2022-03-30
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.448 Å)
Cite:Discovery of Small-Molecule Allosteric Inhibitors of Pf ATC as Antimalarials.
J.Am.Chem.Soc., 144, 2022
7WN1
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BU of 7wn1 by Molmil
Structure of PfNT1(Y190A) in complex with nanobody 48 and inosine
Descriptor: Equilibrative nucleoside/nucleobase transporter, INOSINE, nanobody48
Authors:Wang, C, Deng, D, Ren, R.B, Yu, L.Y.
Deposit date:2022-01-17
Release date:2023-02-01
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1.
Nat Commun, 14, 2023
7UVP
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BU of 7uvp by Molmil
Cryo-EM structure of the ribosome-bound Bacteroides thetaiotaomicron EF-G2
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tetracycline resistance protein TetQ
Authors:Wang, C, Han, W, Groisman, E.A, Liu, J.
Deposit date:2022-05-02
Release date:2023-05-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the ribosome-bound Bacteroides thetaiotaomicron EF-G2
To Be Published

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PDB entries from 2024-08-28

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