Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 270 results

3QX3
DownloadVisualize
BU of 3qx3 by Molmil
Human topoisomerase IIbeta in complex with DNA and etoposide
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), ...
Authors:Wu, C.C, Li, T.K, Farh, L, Lin, L.Y, Lin, T.S, Yu, Y.J, Yen, T.J, Chiang, C.W, Chan, N.L.
Deposit date:2011-03-01
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:Structural basis of type II topoisomerase inhibition by the anticancer drug etoposide
Science, 333, 2011
5ZKJ
DownloadVisualize
BU of 5zkj by Molmil
Human EXOG-H140A in complex with RNA/DNA hybrid duplex
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Wu, C.C, Lin, J.L.J, Yuan, H.S.
Deposit date:2018-03-24
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
Nucleic Acids Res., 47, 2019
5ZKI
DownloadVisualize
BU of 5zki by Molmil
Human EXOG-H140A in complex with duplex DNA
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Wu, C.C, Lin, J.L.J, Yuan, H.S.
Deposit date:2018-03-24
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.321 Å)
Cite:A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
Nucleic Acids Res., 47, 2019
6K80
DownloadVisualize
BU of 6k80 by Molmil
Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase in Complex with CoA and Tryptophol
Descriptor: 2-(1H-indol-3-yl)ethanol, ACETYL COENZYME *A, Dopamine N-acetyltransferase
Authors:Wu, C.Y, Hu, I.C, Yang, Y.C, Cheng, H.C, Lyu, P.C.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:An essential role of acetyl coenzyme A in the catalytic cycle of insect arylalkylamine N-acetyltransferase.
Commun Biol, 3, 2020
4J3N
DownloadVisualize
BU of 4j3n by Molmil
Human Topoisomerase Iibeta in complex with DNA
Descriptor: DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), DNA topoisomerase 2-beta, ...
Authors:Wu, C.C, Li, T.K, Li, Y.C, Chan, N.L.
Deposit date:2013-02-06
Release date:2013-10-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:On the structural basis and design guidelines for type II topoisomerase-targeting anticancer drugs
Nucleic Acids Res., 41, 2013
5W0X
DownloadVisualize
BU of 5w0x by Molmil
Crystal structure of mouse TOR signaling pathway regulator-like (TIPRL) delta 94-103
Descriptor: TIP41-like protein
Authors:Wu, C, Zheng, A, Li, J, Satyshur, K, Xing, Y.
Deposit date:2017-06-01
Release date:2018-01-17
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.717 Å)
Cite:Methylation-regulated decommissioning of multimeric PP2A complexes.
Nat Commun, 8, 2017
6IID
DownloadVisualize
BU of 6iid by Molmil
Human EXOG-H140A in complex with RNA-DNA chimeric duplex
Descriptor: DNA (5'-D(*CP*GP*TP*GP*AP*CP*AP*TP*CP*CP*CP*G)-3'), DNA/RNA (5'-R(P*CP*GP*GP*GP*A)-D(P*T)-R(P*G)-D(P*T)-R(P*CP*AP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Wu, C.C, Lin, J.L.J, Yuan, H.S.
Deposit date:2018-10-04
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.986 Å)
Cite:A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
Nucleic Acids Res., 47, 2019
7YJW
DownloadVisualize
BU of 7yjw by Molmil
Structure of Leptospira santarosai serovar shermani LRR protein LSS01692
Descriptor: Membrane protein
Authors:Wu, C.T, Hsu, S.H, Yang, C.W, Sun, Y.J.
Deposit date:2022-07-20
Release date:2023-06-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Leptospira LSS_01692 reveals a dimeric structure and induces inflammatory responses through Toll-like receptor 2-dependent NF-kappa B and MAPK signal transduction pathways.
Febs J., 290, 2023
7DBB
DownloadVisualize
BU of 7dbb by Molmil
SSE in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-phenyl-3-(3,4,5-trimethoxyphenyl)-3,4-dihydropyrazole-2-carbothioamide, CALCIUM ION, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-10-19
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:SSE in complex with tubulin
To Be Published
7DBC
DownloadVisualize
BU of 7dbc by Molmil
PRA in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-10-19
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:PRA in complex with tubulin
To Be Published
7DBD
DownloadVisualize
BU of 7dbd by Molmil
444 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-10-19
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.094 Å)
Cite:444 in complex with tubulin
To Be Published
7DAF
DownloadVisualize
BU of 7daf by Molmil
IXA in complex with tubulin
Descriptor: (1~{S},3~{S},7~{S},10~{R},11~{S},12~{S},16~{R})-8,8,10,12,16-pentamethyl-3-[(~{E})-1-(2-methyl-1,3-thiazol-4-yl)prop-1-en-2-yl]-7,11-bis(oxidanyl)-17-oxa-4-azabicyclo[14.1.0]heptadecane-5,9-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wu, C, Wang, Y.
Deposit date:2020-10-16
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution X-ray structure of three microtubule-stabilizing agents in complex with tubulin provide a rationale for drug design.
Biochem.Biophys.Res.Commun., 534, 2021
7DAE
DownloadVisualize
BU of 7dae by Molmil
EPB in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE, CALCIUM ION, ...
Authors:Wu, C, Wang, Y.
Deposit date:2020-10-16
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:High-resolution X-ray structure of three microtubule-stabilizing agents in complex with tubulin provide a rationale for drug design.
Biochem.Biophys.Res.Commun., 534, 2021
7DBA
DownloadVisualize
BU of 7dba by Molmil
RYX in complex with tubulin
Descriptor: 2-(1-methylindol-4-yl)-7-(3,4,5-trimethoxyphenyl)-1~{H}-benzimidazole, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-10-19
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.461 Å)
Cite:RYX in complex with tubulin
To Be Published
7DB9
DownloadVisualize
BU of 7db9 by Molmil
IC1 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(2,4,6-TRIMETHOXY-PHENYL)-METHYLENE]-INDOLIN-2-ONE, CALCIUM ION, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-10-19
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.845 Å)
Cite:IC1 in complex with tubulin
To Be Published
7XBI
DownloadVisualize
BU of 7xbi by Molmil
The crystal structure of human TrkA kinase bound to the inhibitor
Descriptor: 4-[[2-fluoranyl-5-(trifluoromethyl)phenyl]carbamoylamino]-~{N}-[3-(1-methylpyrazol-4-yl)-1~{H}-indazol-5-yl]-2-(trifluoromethyl)benzamide, CHLORIDE ION, High affinity nerve growth factor receptor
Authors:Wu, C.Y, Wang, G, Ouyang, L.
Deposit date:2022-03-21
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:The crystal structure of human TrkA kinase bound to the inhibitor
To be published
7CNO
DownloadVisualize
BU of 7cno by Molmil
Phomopsin A in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2020-08-02
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The high-resolution X-ray structure of vinca-domain inhibitors of microtubules provides a rational approach for drug design.
Febs Lett., 595, 2021
1MN4
DownloadVisualize
BU of 1mn4 by Molmil
Structure of Ndt80 (Residues 59-340) DNA-binding domain core
Descriptor: NDT80 PROTEIN
Authors:Lamoureux, J.S, Stuart, D, Tsang, R, Wu, C, Glover, J.N.M.
Deposit date:2002-09-04
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the sporulation-specific transcription factor Ndt80 bound to DNA
Embo J., 21, 2002
5J71
DownloadVisualize
BU of 5j71 by Molmil
Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS35
Descriptor: 4-({5-[(piperidin-4-yl)amino]-1,3-dihydro-2H-isoindol-2-yl}sulfonyl)benzene-1,3-diol, L(+)-TARTARIC ACID, [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, ...
Authors:Gui, W.J, Tso, S.C, Chuang, J.L, Wu, C.Y, Qi, X, Wynn, R.M, Chuang, D.T.
Deposit date:2016-04-05
Release date:2017-01-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Development of Dihydroxyphenyl Sulfonylisoindoline Derivatives as Liver-Targeting Pyruvate Dehydrogenase Kinase Inhibitors.
J. Med. Chem., 60, 2017
5JMT
DownloadVisualize
BU of 5jmt by Molmil
Crystal structure of Zika virus NS3 helicase
Descriptor: NS3 helicase
Authors:Tian, H, Ji, X, Yang, X, Xie, W, Yang, K, Chen, C, Wu, C, Chi, H, Mu, Z, Wang, Z, Yang, H.
Deposit date:2016-04-29
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:The crystal structure of Zika virus helicase: basis for antiviral drug design
Protein Cell, 7, 2016
4MP2
DownloadVisualize
BU of 4mp2 by Molmil
Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PA1
Descriptor: (5-bromo-2,4-dihydroxyphenyl)(1,3-dihydro-2H-isoindol-2-yl)methanone, L(+)-TARTARIC ACID, [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, ...
Authors:Gui, W.J, Tso, S.C, Chuang, J.L, Wu, C.Y, Qi, X, Tambar, U.K, Wynn, R.M, Chuang, D.T.
Deposit date:2013-09-12
Release date:2014-01-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structure-guided Development of Specific Pyruvate Dehydrogenase Kinase Inhibitors Targeting the ATP-binding Pocket.
J.Biol.Chem., 289, 2014
8HCD
DownloadVisualize
BU of 8hcd by Molmil
Crystal structure of mTREX1-DNA product complex (dNMP)
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, COBALT (II) ION, ...
Authors:Hsiao, Y.Y, Huang, K.W, Wu, C.Y.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids.
Nucleic Acids Res., 51, 2023
8HCH
DownloadVisualize
BU of 8hch by Molmil
Crystal structure of mTREX1-Uridine complex
Descriptor: MAGNESIUM ION, Three-prime repair exonuclease 1, URIDINE
Authors:Hsiao, Y.Y, Huang, K.W, Wu, C.Y.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids.
Nucleic Acids Res., 51, 2023
8HCC
DownloadVisualize
BU of 8hcc by Molmil
Crystal structure of mTREX1-RNA product complex (AMP)
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
Authors:Hsiao, Y.Y, Huang, K.W, Wu, C.Y.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids.
Nucleic Acids Res., 51, 2023
8HCE
DownloadVisualize
BU of 8hce by Molmil
Crystal structure of mTREX1-CMP complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Hsiao, Y.Y, Huang, K.W, Wu, C.Y.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids.
Nucleic Acids Res., 51, 2023

221051

건을2024-06-12부터공개중

PDB statisticsPDBj update infoContact PDBjnumon