Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12920 results

3ISU
DownloadVisualize
BU of 3isu by Molmil
Crystal structure of the RGC domain of IQGAP3
Descriptor: Ras GTPase-activating-like protein IQGAP3
Authors:Nedyalkova, L, Tempel, W, Tong, Y, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-08-27
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of the RGC domain of IQGAP3
to be published
7SU3
DownloadVisualize
BU of 7su3 by Molmil
CryoEM structure of DNA-PK complex VII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
4XM1
DownloadVisualize
BU of 4xm1 by Molmil
N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium
Descriptor: CADMIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
7SUD
DownloadVisualize
BU of 7sud by Molmil
CryoEM structure of DNA-PK complex VIII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA-dependent protein kinase catalytic subunit, MAGNESIUM ION, ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2022-01-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
2SGE
DownloadVisualize
BU of 2sge by Molmil
GLU 18 VARIANT OF TURKEY OVOMUCOID INHIBITOR THIRD DOMAIN COMPLEXED WITH STREPTOMYCES GRISEUS PROTEINASE B AT PH 10.7
Descriptor: Ovomucoid, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Huang, K, Lu, W, Anderson, S, Laskowski Jr, M, James, M.N.G.
Deposit date:1999-03-25
Release date:2003-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
Protein Sci., 4, 1995
2RK3
DownloadVisualize
BU of 2rk3 by Molmil
Structure of A104T DJ-1
Descriptor: Protein DJ-1
Authors:Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
Deposit date:2007-10-16
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
4XSO
DownloadVisualize
BU of 4xso by Molmil
Crystal structure of apo-form Alr3699/HepE from Anabaena sp. strain PCC 7120
Descriptor: Alr3699 protein, GLYCEROL
Authors:Wang, X.P, Dai, Y.N, Jiang, Y.L, Cheng, W, Chen, Y.X, Zhou, C.Z.
Deposit date:2015-01-22
Release date:2016-01-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and enzymatic analyses of a glucosyltransferase Alr3699/HepE involved in Anabaena heterocyst envelop polysaccharide biosynthesis
Glycobiology, 26, 2016
6JFP
DownloadVisualize
BU of 6jfp by Molmil
Crystal structure of the beta-glucosidase Bgl15
Descriptor: beta-D-glucopyranose, beta-glucosidase 15
Authors:Xie, W, Chen, R.
Deposit date:2019-02-11
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Engineering of beta-Glucosidase Bgl15 with Simultaneously Enhanced Glucose Tolerance and Thermostability To Improve Its Performance in High-Solid Cellulose Hydrolysis.
J.Agric.Food Chem., 68, 2020
4XVL
DownloadVisualize
BU of 4xvl by Molmil
Binary complex of human polymerase nu and DNA with the finger domain open
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*GP*AP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*AP*GP*CP*GP*TP*CP*A)-3'), ...
Authors:Lee, Y.-S, Yang, W.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis.
Nat.Struct.Mol.Biol., 22, 2015
2RP3
DownloadVisualize
BU of 2rp3 by Molmil
Solution Structure of Cyanovirin-N Domain B Mutant
Descriptor: Cyanovirin-N
Authors:Matei, E, Furey, W, Gronenborn, A.M.
Deposit date:2008-04-30
Release date:2008-08-19
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution and crystal structures of a sugar binding site mutant of cyanovirin-N: no evidence of domain swapping
Structure, 16, 2008
7AJ6
DownloadVisualize
BU of 7aj6 by Molmil
LN02 Fab
Descriptor: LN02, LN02 heavy chain
Authors:Caillat, C, Fenwick, G, Pantaleo, G, Weissenhorn, W.
Deposit date:2020-09-28
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:LN02 Fab
To Be Published
4XPL
DownloadVisualize
BU of 4xpl by Molmil
The crystal structure of Campylobacter jejuni N-acetyltransferase PseH in complex with acetyl coenzyme A
Descriptor: ACETYL COENZYME *A, N-Acetyltransferase, PseH
Authors:Song, W.S, Nam, M.S, Namgung, B, Yoon, S.I.
Deposit date:2015-01-17
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of PseH, the Campylobacter jejuni N-acetyltransferase involved in bacterial O-linked glycosylation.
Biochem.Biophys.Res.Commun., 458, 2015
4Y01
DownloadVisualize
BU of 4y01 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Descriptor: GLYCEROL, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
1X8U
DownloadVisualize
BU of 1x8u by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Carboxymycobactin T
Descriptor: CARBOXYMYCOBACTIN T, Neutrophil gelatinase-associated lipocalin
Authors:Holmes, M.A, Paulsene, W, Jide, X, Ratledge, C, Strong, R.K.
Deposit date:2004-08-18
Release date:2005-01-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Siderocalin (Lcn 2) Also Binds Carboxymycobactins, Potentially Defending against Mycobacterial Infections through Iron Sequestration
Structure, 13, 2005
7TBH
DownloadVisualize
BU of 7tbh by Molmil
cryo-EM structure of MBP-KIX-apoferritin complex with peptide 7
Descriptor: Isoform 2 of CREB-binding protein,Ferritin heavy chain, N-terminally processed, LEU-SER-ARG-ARG-PRO-SEP-TYR-ARG-LYS-ILE-LEU-ASN-ASP-LEU-SER-SER-ASP-ALA-PRO
Authors:Zhang, K, Horikoshi, N, Li, S, Powers, A, Hameedi, M, Pintilie, G, Chae, H, Khan, Y, Suomivuori, C, Dror, R, Sakamoto, K, Chiu, W, Wakatsuki, S.
Deposit date:2021-12-22
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Cryo-EM, Protein Engineering, and Simulation Enable the Development of Peptide Therapeutics against Acute Myeloid Leukemia.
Acs Cent.Sci., 8, 2022
3IEB
DownloadVisualize
BU of 3ieb by Molmil
Crystal structure of 3-keto-L-gulonate-6-phosphate decarboxylase from Vibrio cholerae O1 biovar El Tor str. N16961
Descriptor: GLYCEROL, Hexulose-6-phosphate synthase SgbH, SULFATE ION
Authors:Nocek, B, Maltseva, N, Osipiuk, J, Stam, J, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-07-22
Release date:2009-08-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of 3-keto-L-gulonate-6-phosphate decarboxylase from Vibrio cholerae O1 biovar El Tor str. N16961
To be Published
2RK6
DownloadVisualize
BU of 2rk6 by Molmil
Structure of E163K DJ-1
Descriptor: Protein DJ-1
Authors:Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
Deposit date:2007-10-16
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
3IGJ
DownloadVisualize
BU of 3igj by Molmil
Crystal Structure of Maltose O-acetyltransferase Complexed with Acetyl Coenzyme A from Bacillus anthracis
Descriptor: ACETYL COENZYME *A, FORMIC ACID, GLYCEROL, ...
Authors:Maltseva, N, Kim, Y, Papazisi, L, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-07-27
Release date:2009-08-04
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Maltose O-acetyltransferase Complexed with Acetyl Coenzyme A from Bacillus anthracis
To be Published
7TB3
DownloadVisualize
BU of 7tb3 by Molmil
cryo-EM structure of MBP-KIX-apoferritin
Descriptor: Isoform 2 of CREB-binding protein,Ferritin heavy chain, N-terminally processed
Authors:Zhang, K, Horikoshi, N, Li, S, Powers, A, Hameedi, M, Pintilie, G, Chae, H, Khan, Y, Suomivuori, C, Dror, R, Sakamoto, K, Chiu, W, Wakatsuki, S.
Deposit date:2021-12-21
Release date:2022-03-16
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Cryo-EM, Protein Engineering, and Simulation Enable the Development of Peptide Therapeutics against Acute Myeloid Leukemia.
Acs Cent.Sci., 8, 2022
4XZ8
DownloadVisualize
BU of 4xz8 by Molmil
The crystal structure of Erve virus nucleoprotein
Descriptor: Nucleoprotein
Authors:Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
Deposit date:2015-02-04
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
3IH2
DownloadVisualize
BU of 3ih2 by Molmil
TM1030 crystallized at 323K
Descriptor: Transcriptional regulator, TetR family
Authors:Koclega, K.D, Chruszcz, M, Bujacz, G, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-07-29
Release date:2009-08-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:'Hot' macromolecular crystals.
Cryst.Growth Des., 10, 2010
3IHW
DownloadVisualize
BU of 3ihw by Molmil
Crystal structure of the Ras-like domain of CENTG3
Descriptor: CENTG3, UNKNOWN ATOM OR ION
Authors:Nedyalkova, L, Tempel, W, Tong, Y, Li, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-07-30
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of the Ras-like domain of CENTG3
to be published
4Y02
DownloadVisualize
BU of 4y02 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground)
Descriptor: GLYCEROL, POTASSIUM ION, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
3II5
DownloadVisualize
BU of 3ii5 by Molmil
The Complex of wild-type B-RAF with Pyrazolo pyrimidine inhibitor
Descriptor: B-Raf proto-oncogene serine/threonine-protein kinase, N-[3-(3-{4-[(dimethylamino)methyl]phenyl}pyrazolo[1,5-a]pyrimidin-7-yl)phenyl]-3-(trifluoromethyl)benzamide, PHOSPHATE ION
Authors:Xu, W, Breger, D, Torres, N, Dutia, M, Powell, D, Ciszewski, G.
Deposit date:2009-07-31
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Non-hinge-binding pyrazolo[1,5-a]pyrimidines as potent B-Raf kinase inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
2RHD
DownloadVisualize
BU of 2rhd by Molmil
Crystal structure of Cryptosporidium parvum small GTPase RAB1A
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Small GTP binding protein rab1a
Authors:Dong, A, Xu, X, Lew, J, Lin, Y.H, Khuu, C, Sun, X, Qiu, W, Kozieradzki, I, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Sukumar, D, Structural Genomics Consortium (SGC)
Deposit date:2007-10-09
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structure of Cryptosporidium parvum small GTPase RAB1A.
To be Published

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon