Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 件

7D8V
DownloadVisualize
BU of 7d8v by Molmil
Crystal Structure of A Kinesin-3 KIF13B mutant-T192Y
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Kinesin family member 13B, ...
著者Ren, J.Q, Feng, W.
登録日2020-10-10
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Motor domain-mediated autoinhibition dictates axonal transport by the kinesin UNC-104/KIF1A.
Plos Genet., 17, 2021
7DC1
DownloadVisualize
BU of 7dc1 by Molmil
Crystal structure of human copper homeostatic proteins atox1
分子名称: Copper transport protein ATOX1, SILVER ION
著者Wei, W, Zhao, J, Wang, F.
登録日2020-10-23
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of human copper homeostatic proteins atox1
To Be Published
7DCB
DownloadVisualize
BU of 7dcb by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with inosine
分子名称: Guanosine deaminase, INOSINE, ZINC ION
著者Xie, W, Jia, Q, Zeng, H.
登録日2020-10-23
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DCW
DownloadVisualize
BU of 7dcw by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase complexed with adenosine
分子名称: ADENOSINE, Guanosine deaminase, ZINC ION
著者Xie, W, Jia, Q, Zeng, H.
登録日2020-10-27
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7DCK
DownloadVisualize
BU of 7dck by Molmil
Crystal structure of phosphodiesterase tw9814
分子名称: Lactamase_B domain-containing protein, MANGANESE (II) ION
著者Heo, Y, Yun, J.H, Park, J.H, Park, S.B, Cha, S.S, Lee, W.
登録日2020-10-26
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and functional identification of the uncharacterized metallo-beta-lactamase superfamily protein TW9814 as a phosphodiesterase with unique metal coordination.
Acta Crystallogr D Struct Biol, 78, 2022
7DMW
DownloadVisualize
BU of 7dmw by Molmil
Crystal structure of CcpC regulatory domain in complex with citrate from Bacillus amyloliquefaciens
分子名称: CITRATE ANION, CcpC
著者Chen, J, Wang, L, Shang, F, Liu, W, Chen, Y, Lan, J, Bu, T, Bai, X, Xu, Y.
登録日2020-12-08
公開日2021-10-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Functional and structural analysis of catabolite control protein C that responds to citrate.
Sci Rep, 11, 2021
7DEA
DownloadVisualize
BU of 7dea by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus A/duck Northern China/22/2017 (H5N6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Sun, H, Sun, H, Song, J, Zhang, W, Wei, X, Qi, J, Gao, G.F, Liu, J.
登録日2020-11-03
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Haemagglutinin and neuraminidase acid stability in H5N6 avian influenza virus confers infection adaptation in mammals
To Be Published
7DKD
DownloadVisualize
BU of 7dkd by Molmil
Stenotrophomonas maltophilia DPP7 in complex with Asn-Tyr
分子名称: ASPARAGINE, Dipeptidyl-peptidase, GLYCEROL, ...
著者Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2020-11-23
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7.
Sci Rep, 11, 2021
7DKC
DownloadVisualize
BU of 7dkc by Molmil
Stenotrophomonas maltophilia DPP7 in complex with Tyr-Tyr
分子名称: Dipeptidyl-peptidase, GLYCEROL, TYROSINE
著者Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2020-11-23
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7.
Sci Rep, 11, 2021
7DEB
DownloadVisualize
BU of 7deb by Molmil
Structure of an avian influenza H5 hemagglutinin from the influenza virus A/duck/Eastern China/L0230/2010 (H5N2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Sun, H, Sun, H, Song, J, Zhang, W, Qi, J, Gao, G.F, Liu, J.
登録日2020-11-03
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Haemagglutinin and neuraminidase acid stability in H5N6 avian influenza virus confers infection adaptation in mammals
To Be Published
7DKE
DownloadVisualize
BU of 7dke by Molmil
Stenotrophomonas maltophilia DPP7 in complex with Phe-Tyr
分子名称: Dipeptidyl-peptidase, GLYCEROL, PHENYLALANINE, ...
著者Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2020-11-23
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7.
Sci Rep, 11, 2021
7DKB
DownloadVisualize
BU of 7dkb by Molmil
Stenotrophomonas maltophilia DPP7 in complex with Val-Tyr
分子名称: Dipeptidyl-peptidase, TYROSINE, VALINE
著者Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2020-11-23
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7.
Sci Rep, 11, 2021
7DE3
DownloadVisualize
BU of 7de3 by Molmil
Human adenylate kinase 1 (hAK1) mutant-R128W
分子名称: Adenylate kinase isoenzyme 1
著者Lin, W.
登録日2020-11-01
公開日2021-11-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Structure of human adenylate kinase 1 mutant-R128W.
To Be Published
7DJN
DownloadVisualize
BU of 7djn by Molmil
Human Serum Albumin
分子名称: Serum albumin
著者Xiang, W, Yue, Z, Su, J.
登録日2020-11-20
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Human Serum Albumin
To Be Published
7EBM
DownloadVisualize
BU of 7ebm by Molmil
W363A mutant of Chitin-specific solute binding protein from Vibrio harveyi in complex with chitobiose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2021-03-10
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
7EBI
DownloadVisualize
BU of 7ebi by Molmil
Chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitotetraose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2021-03-09
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
8CBL
DownloadVisualize
BU of 8cbl by Molmil
Structure of human mitochondrial RNase Z in complex with mitochondrial pre-tRNA-His(0,Ser)
分子名称: 3-hydroxyacyl-CoA dehydrogenase type-2, Mitochondrial Precursor tRNA-His(0,Ser), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者MEYNIER, V, HARDWICK, S, CATALA, M, ROSKE, J, OERUM, S, CHIRGADZE, D, BARRAUD, P, YU, W, LUISI, B, TISNE, C.
登録日2023-01-25
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structural basis for human mitochondrial tRNA maturation.
Nat Commun, 15, 2024
7E1V
DownloadVisualize
BU of 7e1v by Molmil
Cryo-EM structure of apo hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, CARDIOLIPIN, ...
著者Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
登録日2021-02-03
公開日2021-10-13
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7E1X
DownloadVisualize
BU of 7e1x by Molmil
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in presence of TB47
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, 5-methoxy-2-methyl-~{N}-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]pyrazolo[1,5-a]pyridine-3-carboxamide, ...
著者Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
登録日2021-02-03
公開日2021-10-27
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7ELG
DownloadVisualize
BU of 7elg by Molmil
LC3B modificated with a covalent probe
分子名称: 2-methylidene-5-thiophen-2-yl-cyclohexane-1,3-dione, Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
著者Fan, S, Wan, W.
登録日2021-04-10
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Inhibition of Autophagy by a Small Molecule through Covalent Modification of the LC3 Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E1W
DownloadVisualize
BU of 7e1w by Molmil
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in the presence of Q203
分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, 6-chloranyl-2-ethyl-N-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide, ...
著者Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z.
登録日2021-02-03
公開日2021-10-27
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates.
Elife, 10, 2021
7E40
DownloadVisualize
BU of 7e40 by Molmil
Mechanism of Phosphate Sensing and Signaling Revealed by Rice SPX1-PHR2 Complex Structure
分子名称: INOSITOL HEXAKISPHOSPHATE, Protein PHOSPHATE STARVATION RESPONSE 2, SPX domain-containing protein 1,Endolysin
著者Zhou, J, Hu, Q, Yao, D, Xing, W.
登録日2021-02-09
公開日2021-11-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Mechanism of phosphate sensing and signaling revealed by rice SPX1-PHR2 complex structure.
Nat Commun, 12, 2021
7DXF
DownloadVisualize
BU of 7dxf by Molmil
Structure of BTDM-bound human TRPC6 nanodisc at 2.9 angstrom in high calcium state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
著者Chen, L, Guo, W.
登録日2021-01-18
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural mechanism of human TRPC3 and TRPC6 channel regulation by their intracellular calcium-binding sites.
Neuron, 110, 2022
7DXC
DownloadVisualize
BU of 7dxc by Molmil
Structure of TRPC3 at 3.06 angstrom in low calcium state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL HEMISUCCINATE, Short transient receptor potential channel 3, ...
著者Chen, L, Guo, W.
登録日2021-01-18
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural mechanism of human TRPC3 and TRPC6 channel regulation by their intracellular calcium-binding sites.
Neuron, 110, 2022
7DXG
DownloadVisualize
BU of 7dxg by Molmil
Structure of SAR7334-bound TRPC6 at 2.9 angstrom
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 4-[[(1R,2R)-2-[(3R)-3-azanylpiperidin-1-yl]-2,3-dihydro-1H-inden-1-yl]oxy]-3-chloranyl-benzenecarbonitrile, CALCIUM ION, ...
著者Chen, L, Guo, W.
登録日2021-01-18
公開日2022-02-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural mechanism of human TRPC3 and TRPC6 channel regulation by their intracellular calcium-binding sites.
Neuron, 110, 2022

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon