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PDB: 12920 件

4N9E
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Fragment-based Design of 3-Aminopyridine-derived Amides as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
分子名称: 1,2-ETHANEDIOL, 1-[(1-benzoylpiperidin-4-yl)methyl]-N-(pyridin-3-yl)-1H-benzimidazole-5-carboxamide, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
著者Dragovich, P.S, Zhao, G, Baumeister, T, Bravo, B, Giannetti, A.M, Ho, Y, Hua, R, Li, G, Liang, X, O'Brien, T, Skelton, N.J, Wang, C, Zhao, Q, Oh, A, Wang, W, Wang, Y, Xiao, Y, Yuen, P, Zak, M, Zheng, X.
登録日2013-10-20
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Fragment-based design of 3-aminopyridine-derived amides as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 24, 2014
3SZL
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IspH:Ligand Mutants - wt 70sec
分子名称: (2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
著者Span, I, Graewert, T, Bacher, A, Eisenreich, W, Groll, M.
登録日2011-07-19
公開日2011-11-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structures of Mutant IspH Proteins Reveal a Rotation of the Substrate's Hydroxymethyl Group during Catalysis.
J.Mol.Biol., 416, 2012
4NAK
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Arabidopsis thaliana IspD in complex with pentabromo-pseudilin
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, ...
著者Kunfermann, A, Witschel, M, Illarionov, B, Martin, R, Rottmann, M, Hoffken, H.W, Seet, M, Eisenreich, W, Knolker, H.-J, Fischer, M, Bacher, A, Groll, M, Diederich, F.
登録日2013-10-22
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pseudilins: Halogenated, Allosteric Inhibitors of the Non-Mevalonate Pathway Enzyme IspD.
Angew.Chem.Int.Ed.Engl., 53, 2014
5HZ3
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Plant peptide hormone receptor RGFR1 in complex with RGFR5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASP-PTR-PRO-LYS-PRO-SER-THR-ARG-PRO-HYP-ARG-HIS-ASN, ...
著者Song, W, Han, Z, Chai, J.
登録日2016-02-02
公開日2017-03-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Plant Receptor
To Be Published
3T4D
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Crystal Structure of NaK2K Channel Y55F Mutant
分子名称: POTASSIUM ION, Potassium channel protein
著者Sauer, D.B, Zeng, W, Raghunathan, S, Jiang, Y.
登録日2011-07-25
公開日2011-10-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.
Proc.Natl.Acad.Sci.USA, 108, 2011
5H7E
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Crystal Structure of native drCPDase
分子名称: GLYCEROL, RNA 2',3'-cyclic phosphodiesterase, SULFATE ION
著者Han, W, Hua, Y, Zhao, Y.
登録日2016-11-18
公開日2017-09-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the RNA 2',3'-cyclic phosphodiesterase from Deinococcus radiodurans
Acta Crystallogr F Struct Biol Commun, 73, 2017
4N72
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Catalytic domain from dihydrolipoamide acetyltransferase of pyruvate dehydrogenase from Escherichia coli
分子名称: Pyruvate dehydrogenase (Dihydrolipoyltransacetylase component)
著者Chandrasekhar, K, Arjunan, P, Furey, W.
登録日2013-10-14
公開日2014-04-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and Function of the Catalytic Domain of the Dihydrolipoyl Acetyltransferase Component in Escherichia coli Pyruvate Dehydrogenase Complex.
J.Biol.Chem., 289, 2014
3SZO
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IspH:HMBPP complex after 3 minutes X-ray pre-exposure
分子名称: (2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
著者Span, I, Graewert, T, Bacher, A, Eisenreich, W, Groll, M.
登録日2011-07-19
公開日2011-11-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structures of Mutant IspH Proteins Reveal a Rotation of the Substrate's Hydroxymethyl Group during Catalysis.
J.Mol.Biol., 416, 2012
4N9Z
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Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NAN
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Arabidopsis thaliana IspD in complex with tetrabromo-pseudilin
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, ...
著者Kunfermann, A, Witschel, M, Illarionov, B, Martin, R, Rottmann, M, Hoffken, H.W, Seet, M, Eisenreich, W, Knolker, H.-J, Fischer, M, Bacher, A, Groll, M, Diederich, F.
登録日2013-10-22
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pseudilins: Halogenated, Allosteric Inhibitors of the Non-Mevalonate Pathway Enzyme IspD.
Angew.Chem.Int.Ed.Engl., 53, 2014
5HAW
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BU of 5haw by Molmil
structures of the NO factor SlmA bound to DNA and the cytoskeletal cell division protein FtsZ
分子名称: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), FtsZ CTT, Nucleoid occlusion factor SlmA
著者Schumacher, M.A, Zeng, W.
登録日2015-12-31
公開日2016-04-13
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HBY
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RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites
分子名称: MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*C)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid
著者Zhang, W, Tam, C.P, Wang, J, Szostak, J.W.
登録日2016-01-03
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016
5HEK
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crystal structure of M1.HpyAVI
分子名称: Adenine specific DNA methyltransferase (DpnA)
著者Ma, B, Zhang, H, Liu, W.
登録日2016-01-06
公開日2016-11-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Biochemical and structural characterization of a DNA N6-adenine methyltransferase from Helicobacter pylori
Oncotarget, 7, 2016
4NFF
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Human kallikrein-related peptidase 2 in complex with PPACK
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Kallikrein-2
著者Skala, W, Brandstetter, H, Magdolen, V, Goettig, P.
登録日2013-10-31
公開日2014-10-29
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analyses of human kallikrein-related peptidase 2 establish the 99-loop as master regulator of activity
J.Biol.Chem., 289, 2014
3ST0
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Engineered medium-affinity halide-binding protein derived from YFP: halide-free
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation.
J.Neurosci., 33, 2013
5HJK
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Crystal Structure of Pyrococcus abyssi Trm5a complexed with SAH
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(37)-N1)-methyltransferase Trm5a
著者Xie, W, Wang, C, Jia, Q.
登録日2016-01-13
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
3TC5
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Selective targeting of disease-relevant protein binding domains by O-phosphorylated natural product derivatives
分子名称: (11alpha,16alpha)-9-fluoro-11,17-dihydroxy-16-methyl-3,20-dioxopregna-1,4-dien-21-yl dihydrogen phosphate, HEXAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Graeber, M, Janczyk, W, Sperl, B, Elumalai, N, Kozany, C, Hausch, F, Holak, T.A, Berg, T.
登録日2011-08-08
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Selective targeting of disease-relevant protein binding domains by o-phosphorylated natural product derivatives.
Acs Chem.Biol., 6, 2011
5HJM
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Crystal Structure of Pyrococcus abyssi Trm5a complexed with MTA
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, ACETATE ION, HOMOSERINE LACTONE, ...
著者Xie, W, Wang, C, Jia, Q.
登録日2016-01-13
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
5HJQ
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Crystal structure of the TBC domain of Skywalker/TBC1D24 from Drosophila melanogaster in complex with inositol(1,4,5)triphosphate
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, LD10117p
著者Fischer, B, Paesmans, J, Versees, W.
登録日2016-01-13
公開日2016-09-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Skywalker-TBC1D24 has a lipid-binding pocket mutated in epilepsy and required for synaptic function.
Nat.Struct.Mol.Biol., 23, 2016
3THW
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Human MutSbeta complexed with an IDL of 4 bases (Loop4) and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA Loop4 hairpin, DNA mismatch repair protein Msh2, ...
著者Yang, W.
登録日2011-08-19
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Mechanism of mismatch recognition revealed by human MutSbeta bound to unpaired DNA loops
Nat.Struct.Mol.Biol., 19, 2012
4NF2
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Crystal structure of anabolic ornithine carbamoyltransferase from Bacillus anthracis in complex with carbamoyl phosphate and L-norvaline
分子名称: CHLORIDE ION, NORVALINE, Ornithine carbamoyltransferase, ...
著者Shabalin, I.G, Handing, K, Cymborowski, M.T, Stam, J, Winsor, J, Shuvalova, L, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-10-30
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
To be Published
4NFT
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Crystal structure of human lnkH2B-h2A.Z-Anp32e
分子名称: Acidic leucine-rich nuclear phosphoprotein 32 family member E, Histone H2B type 2-E, Histone H2A.Z
著者Shan, S, Pan, L, Mao, Z, Wang, W, Sun, J, Dong, Q, Liang, X, Ding, X, Chen, S, Dai, L, Zhang, Z, Zhu, B, Zhou, Z.
登録日2013-11-01
公開日2014-04-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Anp32e, a higher eukaryotic histone chaperone directs preferential recognition for H2A.Z
Cell Res., 24, 2014
5HTV
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Putative sugar kinases from Arabidopsis thaliana in complex with AMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Putative xylulose kinase
著者Xie, Y, Li, M, Chang, W.
登録日2016-01-27
公開日2016-06-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
4NSP
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Crystal structure of human ENDOV
分子名称: Endonuclease V
著者Xie, W, Zhang, Z, Hao, Z.
登録日2013-11-28
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of human endonuclease V as an inosine-specific ribonuclease.
Acta Crystallogr.,Sect.D, 70, 2014
3T4Z
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Crystal Structure of NaK2K Channel Y55W Mutant
分子名称: POTASSIUM ION, Potassium channel protein
著者Sauer, D.B, Zeng, W, Raghunathan, S, Jiang, Y.
登録日2011-07-26
公開日2011-10-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.
Proc.Natl.Acad.Sci.USA, 108, 2011

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