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PDB: 12895 results

3KEL
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BU of 3kel by Molmil
Crystal Structure of IspH:PP complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, PYROPHOSPHATE 2-
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
4A0O
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BU of 4a0o by Molmil
Symmetry-free cryo-EM map of TRiC in the nucleotide-free (apo) state
Descriptor: T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y, Schroder, G.F, Meyer, A.S, Jakana, J, Ma, B, Dougherty, M.T, Schmid, M.F, Reissmann, S, Levitt, M, Ludtke, S.L, Frydman, J, Chiu, W.
Deposit date:2011-09-10
Release date:2012-02-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4A5S
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BU of 4a5s by Molmil
CRYSTAL STRUCTURE OF HUMAN DPP4 IN COMPLEX WITH A NOVAL HETEROCYCLIC DPP4 INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3S)-3-AMINOPIPERIDIN-1-YL]-5-BENZYL-4-OXO-3-(QUINOLIN-4-YLMETHYL)-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDINE-7-CARBONITRILE, DIPEPTIDYL PEPTIDASE 4 SOLUBLE FORM, ...
Authors:Ostermann, N, Kroemer, M, Zink, F, Gerhartz, B, Sutton, J.M, Clark, D.E, Dunsdon, S.J, Fenton, G, Fillmore, A, Harris, N.V, Higgs, C, Hurley, C.A, Krintel, S.L, MacKenzie, R.E, Duttaroy, A, Gangl, E, Maniara, W, Sedrani, R, Namoto, K, Sirockin, F, Trappe, J, Hassiepen, U, Baeschlin, D.K.
Deposit date:2011-10-28
Release date:2012-02-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Novel Heterocyclic Dpp-4 Inhibitors for the Treatment of Type 2 Diabetes.
Bioorg.Med.Chem.Lett., 22, 2012
4ACR
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BU of 4acr by Molmil
Crystal structure of N-glycosylated, C-terminally truncated human glypican-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYPICAN-1
Authors:Svensson, G, Awad, W, Mani, K, Logan, D.T.
Deposit date:2011-12-17
Release date:2012-02-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of N-Glycosylated Human Glypican-1 Core Protein: Structure of Two Loops Evolutionarily Conserved in Vertebrate Glypican-1.
J.Biol.Chem., 287, 2012
3KWY
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BU of 3kwy by Molmil
Crystal structure of RXRalpha ligand binding domain in complex with triphenyltin and a coactivator fragment
Descriptor: ACETATE ION, Nuclear receptor coactivator 2 peptide, Retinoic acid receptor RXR-alpha, ...
Authors:le Maire, A, Bourguet, W.
Deposit date:2009-12-02
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A structural view of nuclear hormone receptor: endocrine disruptor interactions.
Cell.Mol.Life Sci., 67, 2010
3KHE
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BU of 3khe by Molmil
Crystal structure of the calcium-loaded calmodulin-like domain of the CDPK, 541.m00134 from toxoplasma gondii
Descriptor: CALCIUM ION, Calmodulin-like domain protein kinase isoform 3, GLYCEROL, ...
Authors:Wernimont, A.K, Hutchinson, A, Artz, J.D, Mackenzie, F, Cossar, D, Kozieradzki, I, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Hui, R, Qiu, W, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2009-10-30
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of parasitic CDPK domains point to a common mechanism of activation.
Proteins, 79, 2011
1N4O
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BU of 1n4o by Molmil
Crystal structure of the Class A beta-lactamase L2 from Stenotrophomonas maltophilia
Descriptor: L2 beta-lactamase, SULFATE ION
Authors:Pernot, L, Petrella, S, Sougakoff, W.
Deposit date:2002-11-01
Release date:2003-11-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Role of the disulfide bridge Cys69-Cys238 in class A b-lactamases : a structural and biochemical investigation on the b-lactamase L2 from Stenotrophomonas maltophilia
To be Published
7VVE
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BU of 7vve by Molmil
Complex structure of a leaf-branch compost cutinase variant in complex with mono(2-hydroxyethyl) terephthalic acid
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 4-(2-hydroxyethyloxycarbonyl)benzoic acid, CALCIUM ION, ...
Authors:Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
Deposit date:2021-11-05
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
3KZP
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BU of 3kzp by Molmil
Crystal structure of putative diguanylate cyclase/phosphodiesterase from Listaria monocytigenes
Descriptor: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Klimecka, M.M, Chruszcz, M, Zimmerman, M.D, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-12-08
Release date:2009-12-22
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of putative diguanylate cyclase/phosphodiesterase from Listaria monocytigenes
To be Published
5C3Q
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BU of 5c3q by Molmil
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and thymine (T)
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, NICKEL (II) ION, ...
Authors:Li, W, Zhang, T, Ding, J.
Deposit date:2015-06-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi
Nucleic Acids Res., 43, 2015
4AE3
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BU of 4ae3 by Molmil
Crystal structure of ammosamide 272:myosin-2 motor domain complex
Descriptor: 1,2-ETHANEDIOL, ADP ORTHOVANADATE, AMMOSAMIDE 272, ...
Authors:Chinthalapudi, K, Heissler, S.M, Fenical, W, Manstein, D.J.
Deposit date:2012-01-05
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Ammosamide Mediated Myosin Motor Activity Inhibition
To be Published
8HZ8
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BU of 8hz8 by Molmil
Structure of PPIA in complex with the peptide of NRF2
Descriptor: NRF2 peptide, Peptidyl-prolyl cis-trans isomerase A, N-terminally processed
Authors:Wanyan, W, Hui, M, Jin, H, Lu, W.
Deposit date:2023-01-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of PPIA in complex with the peptide of NRF2
To Be Published
2GLL
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BU of 2gll by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) from Helicobacter pylori
Descriptor: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, BENZAMIDINE, CHLORIDE ION
Authors:Zhang, L, Liu, W, Shen, X, Jiang, H.
Deposit date:2006-04-05
Release date:2007-03-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for catalytic and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ).
J.Biol.Chem., 283, 2008
3ZZV
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BU of 3zzv by Molmil
BambL complexed with Htype2 tetrasaccharide
Descriptor: BAMBL LECTIN, alpha-L-fucopyranose, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Audfray, A, Claudinon, J, Abounit, S, Ruvoen-Clouet, N, Larson, G, Wimmerova, M, LePendu, J, Romer, W, Varrot, A, Imberty, A.
Deposit date:2011-09-05
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes.
J.Biol.Chem., 287, 2012
3F5L
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BU of 3f5l by Molmil
Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, SULFATE ION, ...
Authors:Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
Deposit date:2008-11-04
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
7YBN
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BU of 7ybn by Molmil
SARS-CoV-2 C.1.2 variant spike (Open state)
Descriptor: Spike glycoprotein
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:SARS-CoV-2 lambda variant spike
To Be Published
5C8H
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BU of 5c8h by Molmil
Crystal structure of ORC2 C-terminal domain
Descriptor: Origin recognition complex subunit 2, UNKNOWN ATOM OR ION
Authors:Tempel, W, Xu, C, Dong, A, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-06-25
Release date:2015-07-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of ORC2 C-terminal domain
To Be Published
3KP9
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BU of 3kp9 by Molmil
Structure of a bacterial homolog of vitamin K epoxide reductase
Descriptor: MERCURY (II) ION, UBIQUINONE-10, VKORC1/thioredoxin domain protein
Authors:Li, W, Schulman, S, Dutton, R.J, Boyd, D, Beckwith, J, Rapoport, T.A.
Deposit date:2009-11-16
Release date:2010-02-09
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of a bacterial homologue of vitamin K epoxide reductase.
Nature, 463, 2010
1N67
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BU of 1n67 by Molmil
Clumping Factor A from Staphylococcus aureus
Descriptor: Clumping Factor, MAGNESIUM ION
Authors:Deivanayagam, C.C.S, Wann, E.R, Chen, W, Carson, M, Rajashankar, K.R, Hook, M, Narayana, S.V.L.
Deposit date:2002-11-08
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel variant of the immunoglobulin fold in surface adhesins of Staphylococcus aureus: crystal structure of the fibrinogen-binding MSCRAMM, clumping factor A
Embo J., 21, 2002
2GPM
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BU of 2gpm by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3')
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-18
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
7VVC
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BU of 7vvc by Molmil
Crystal structure of inactive mutant of leaf-branch compost cutinase variant
Descriptor: ACETATE ION, ACETIC ACID, CALCIUM ION, ...
Authors:Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
Deposit date:2021-11-05
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
3FK6
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BU of 3fk6 by Molmil
Crystal structure of TetR triple mutant (H64K, S135L, S138I)
Descriptor: Tetracycline repressor protein class B from transposon Tn10, Tetracycline repressor protein class D
Authors:Klieber, M.A, Scholz, O, Lochner, S, Gmeiner, P, Hillen, W, Muller, Y.A.
Deposit date:2008-12-16
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural origins for selectivity and specificity in an engineered bacterial repressor-inducer pair.
Febs J., 276, 2009
3KH0
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BU of 3kh0 by Molmil
Crystal structure of the Ras-association (RA) domain of RALGDS
Descriptor: Ral guanine nucleotide dissociation stimulator, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tempel, W, Wang, H, Tong, Y, Guan, X, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-10-29
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Ras-association (RA) domain of RALGDS
to be published
1N6G
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BU of 1n6g by Molmil
The structure of immature Dengue-2 prM particles
Descriptor: major envelope protein E
Authors:Zhang, Y, Corver, J, Chipman, P.R, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
Deposit date:2002-11-10
Release date:2003-06-03
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structures of Immature flavivirus particles
EMBO J., 22, 2003
3KE8
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BU of 3ke8 by Molmil
Crystal structure of IspH:HMBPP-complex
Descriptor: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010

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