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PDB: 12580 results

4YY9
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The structure of hemagglutinin from a H6N1 influenza virus (A/Taiwan/2/2013)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HA1, HA2, ...
Authors:Wang, F, Qi, J, Bi, Y, Zhang, W, Wang, M, Wang, M, Liu, J, Yan, J, Shi, Y, Gao, G.F.
Deposit date:2015-03-23
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure of hemagglutinin from a H6N1 influenza virus (A/Taiwan/2/2013) at 2.6 Angstroms resolution
To Be Published
3B9G
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Crystal structure of loop deletion mutant of Trypanosoma vivax nucleoside hydrolase (3GTvNH) in complex with ImmH
Descriptor: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, IAG-nucleoside hydrolase, ...
Authors:Vandemeulebroucke, A, De Vos, S, Van Holsbeke, E, Steyaert, J, Versees, W.
Deposit date:2007-11-05
Release date:2008-04-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Flexible Loop as a Functional Element in the Catalytic Mechanism of Nucleoside Hydrolase from Trypanosoma vivax.
J.Biol.Chem., 283, 2008
4ZAH
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Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12
Descriptor: [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4S,5R,6R)-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3,4-bis(oxidanyl)oxan-2-yl] hydrogen phosphate, dTDP-4-amino-4,6-dideoxygalactose transaminase
Authors:Wang, F, Singh, S, Cao, H, Xu, W, Miller, M.D, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-04-13
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural Basis for the Stereochemical Control of Amine Installation in Nucleotide Sugar Aminotransferases.
Acs Chem.Biol., 10, 2015
4Z0L
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The murine cyclooxygenase-2 complexed with a nido-dicarbaborate-containing indomethacin derivative
Descriptor: (R)-7-{[5-methoxy-2-methyl-3-(methoxycarbonylmethyl)-1H-indolyl]carbonyl}-7,8-dicarba-nido-dodeca-hydroundecaborate, (S)-7-{[5-methoxy-2-methyl-3-(methoxycarbonylmethyl)-1H-indolyl]carbonyl}-7,8-dicarba-nido-dodeca-hydroundecaborate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xu, S, Neumann, W, Banerjee, S, Hey-Hawkins, E, Marnett, L.J.
Deposit date:2015-03-26
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:nido-Dicarbaborate Induces Potent and Selective Inhibition of Cyclooxygenase-2.
Chemmedchem, 11, 2016
8EFE
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Human beta-cardiac myosin II bound to ADP-MG2+ and the associated essential light chain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta-cardiac myosin II, MAGNESIUM ION, ...
Authors:Doran, M.H, Lehman, W, Rynkiewicz, M.J.
Deposit date:2022-09-08
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational changes linked to ADP release from human cardiac myosin bound to actin-tropomyosin.
J.Gen.Physiol., 155, 2023
4YY7
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The structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013) in complex with avian receptor analog 3'SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HA1, ...
Authors:Wang, F, Qi, J, Bi, Y, Zhang, W, Wang, M, Wang, M, Liu, J, Yan, J, Shi, Y, Gao, G.F.
Deposit date:2015-03-23
Release date:2016-03-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013)
To Be Published
4Z9X
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Crystal structure of 2-keto-3-deoxy-D-gluconate dehydrogenase from Streptococcus pyogenes
Descriptor: Gluconate 5-dehydrogenase
Authors:Maruyama, Y, Takase, R, Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2015-04-13
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural determinants in bacterial 2-keto-3-deoxy-D-gluconate dehydrogenase KduD for dual-coenzyme specificity
Proteins, 84, 2016
8EFD
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Human cardiac myosin II and associated essential light chain in the rigor conformation
Descriptor: Beta-cardiac myosin II, Myosin light chain 1/3, skeletal muscle isoform
Authors:Doran, M.H, Lehman, W, Rynkiewicz, M.J.
Deposit date:2022-09-08
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational changes linked to ADP release from human cardiac myosin bound to actin-tropomyosin.
J.Gen.Physiol., 155, 2023
4Z0B
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Crystal Structure of the Fab Fragment of Anti-ofloxacin Antibody and Exploration Its Receptor Binding Site
Descriptor: PHOSPHATE ION, antibody heavy chain, antibody light chain
Authors:He, K, Du, X, Sheng, W, Zhou, X, Wang, J, Wang, S.
Deposit date:2015-03-26
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of the Fab Fragment of an Anti-ofloxacin Antibody and Exploration of Its Specific Binding.
J.Agric.Food Chem., 64, 2016
8EFH
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Helical reconstruction of the human cardiac actin-tropomyosin-myosin complex in complex with ADP-Mg2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
Authors:Doran, M.H, Lehman, W, Rynkiewicz, M.J.
Deposit date:2022-09-08
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Conformational changes linked to ADP release from human cardiac myosin bound to actin-tropomyosin.
J.Gen.Physiol., 155, 2023
3B63
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BU of 3b63 by Molmil
Actin filament model in the extended form of acromsomal bundle in the Limulus sperm
Descriptor: Actin
Authors:Cong, Y, Topf, M, Sali, A, Matsudaira, P, Dougherty, M, Chiu, W, Schmid, M.F.
Deposit date:2007-10-26
Release date:2008-11-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Crystallographic conformers of actin in a biologically active bundle of filaments.
J.Mol.Biol., 375, 2008
4ZG0
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BU of 4zg0 by Molmil
Crystal structure of Mouse Syndesmos protein
Descriptor: Protein syndesmos
Authors:Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W.
Deposit date:2015-04-22
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
4ZGP
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BU of 4zgp by Molmil
Structure of Cdc123 from Schizosaccharomyces pombe
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division cycle protein 123
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
3B9E
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Crystal structure of inactive mutant E315M chitinase A from Vibrio harveyi
Descriptor: Chitinase A
Authors:Songsiriritthigul, C, Pantoom, S, Aguda, A.H, Robinson, R.C, Suginta, W.
Deposit date:2007-11-05
Release date:2008-04-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Vibrio harveyi chitinase A complexed with chitooligosaccharides: implications for the catalytic mechanism
J.Struct.Biol., 162, 2008
4YYB
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The structure of hemagglutinin from a H6N1 influenza virus (A/Taiwan/2/2013) in complex with human receptor analog 6'SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HA1, HA2, ...
Authors:Wang, F, Qi, J, Bi, Y, Zhang, W, Wang, M, Wang, M, Liu, J, Yan, J, Shi, Y, Gao, G.F.
Deposit date:2015-03-23
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Structure of hemagglutinin from a H6N1 influenza virus (A/Taiwan/2/2013) at 2.6 Angstroms resolution
To Be Published
4Z0P
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Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc02828 (SmGhrA) from Sinorhizobium meliloti in complex with NADPH and oxalate
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Sroka, P, Gasiorowska, O.A, Handing, K.B, Shabalin, I.G, Porebski, P.J, Hillerich, B.S, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2015-03-26
Release date:2015-04-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
8C3I
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Dark state of PAS-GAF fragment from Deinococcus radiodurans phytochrome
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Madan Kumar, S, Sebastian, W.
Deposit date:2022-12-24
Release date:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dark state of PAS-GAF fragment from Deinococcus radiodurans phytochrome
To Be Published
7XQK
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The Crystal Structure of CDK3 and CyclinE1 Complex from Biortus.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, G1/S-specific cyclin-E1, GLYCEROL, ...
Authors:Gui, W, Wang, F, Cheng, W, Gao, J, Huang, Y.
Deposit date:2022-05-07
Release date:2023-05-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of CDK3 and CyclinE1 Complex from Biortus.
To Be Published
3B3I
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Citrullination-dependent differential presentation of a self-peptide by HLA-B27 subtypes
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Beltrami, A, Rossmann, M, Fiorillo, M.T, Paladini, F, Sorrentino, R, Saenger, W, Kumar, P, Ziegler, A, Uchanska-Ziegler, B.
Deposit date:2007-10-22
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Citrullination-dependent differential presentation of a self-peptide by HLA-B27 subtypes.
J.Biol.Chem., 283, 2008
4Z9M
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Crystal structure of human sarcomeric mitochondrial creatine kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Creatine kinase S-type, mitochondrial, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Landry, R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2015-04-10
Release date:2015-04-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human sarcomeric mitochondrial creatine kinase
To Be Published
3B6U
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Crystal structure of the motor domain of human kinesin family member 3B in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF3B, MAGNESIUM ION, ...
Authors:Zhu, H, Shen, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-10-29
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Motor domain of human kinesin family member 3B in complex with ADP.
To be Published
3B6S
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BU of 3b6s by Molmil
Crystal Structure of hla-b*2705 Complexed with the Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (vipr) Peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-27 alpha chain, ...
Authors:Beltrami, A, Rossmann, M, Fiorillo, M.T, Sorrentino, R, Saenger, W, Ziegler, A, Uchanska-Ziegler, A.
Deposit date:2007-10-29
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Citrullination-dependent Differential Presentation of a Self-peptide by HLA-B27 Subtypes.
J.Biol.Chem., 283, 2008
3B9F
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1.6 A structure of the PCI-thrombin-heparin complex
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, GLYCEROL, Plasma serine protease inhibitor, ...
Authors:Li, W, Adams, T.E, Huntington, J.A.
Deposit date:2007-11-05
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular basis of thrombin recognition by protein C inhibitor revealed by the 1.6-A structure of the heparin-bridged complex.
Proc.Natl.Acad.Sci.Usa, 105, 2008
8F24
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Mirror-image RNA octamer containing 2'-OMe-L-uridine
Descriptor: Mirror-image RNA 0G-XEC-0G-0U-0A-0C-0A-0C, SULFATE ION
Authors:Dantsu, Y, Zhang, W.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Derivatization of Mirror-Image l-Nucleic Acids with 2'-OMe Modification for Thermal and Structural Stabilization.
Chembiochem, 24, 2023
8F27
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Mirror-image DNA containing 2'-OMe-L-uridine residue
Descriptor: Mirror-image DNA (5'-D(*(0DG)P*(0MU)P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DA)P*(0DC))-3'), SULFATE ION
Authors:Zhang, W, Dantsu, Y.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Derivatization of Mirror-Image l-Nucleic Acids with 2'-OMe Modification for Thermal and Structural Stabilization.
Chembiochem, 24, 2023

224931

數據於2024-09-11公開中

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