Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12479 件

6J6V
DownloadVisualize
BU of 6j6v by Molmil
Crystal structure of heat shock factor 4-DBD
分子名称: Heat shock factor protein 4, NITRATE ION, SODIUM ION
著者Guo, L, Xiao, Z.Y, Wang, S, Liu, W.
登録日2019-01-16
公開日2020-01-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of heat shock factor 4-DBD at 1.20 Angstroms resolution.
To Be Published
6J5Y
DownloadVisualize
BU of 6j5y by Molmil
Crystal structure of fumarylpyruvate hydrolase from Pseudomonas aeruginosa in complex with Mn2+ and pyruvate
分子名称: FAA hydrolase family protein, MANGANESE (II) ION, PYRUVIC ACID
著者Hong, H, Seo, H, Kim, K.-J, Park, W.
登録日2019-01-12
公開日2019-12-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Sequence, structure and function-based classification of the broadly conserved FAH superfamily reveals two distinct fumarylpyruvate hydrolase subfamilies.
Environ.Microbiol., 22, 2020
6GQQ
DownloadVisualize
BU of 6gqq by Molmil
Crystal structure of human KDR (VEGFR2) kinase domain in complex with AZD3229-analogue (compound 35)
分子名称: Vascular endothelial growth factor receptor 2, ~{N}-[4-(6,7-dimethoxyquinazolin-4-yl)oxyphenyl]-2-(4-propan-2-yl-1,2,3-triazol-1-yl)ethanamide
著者Schimpl, M, Hardy, C.J, Ogg, D.J, Overman, R.C, Packer, M.J, Kettle, J.G, Anjum, R, Barry, E, Bhavsar, D, Brown, C, Campbell, A, Goldberg, K, Grondine, M, Guichard, S, Hunt, T, Jones, O, Li, X, Moleva, O, Pearson, S, Shao, W, Smith, A, Smith, J, Stead, D, Stokes, S, Tucker, M, Ye, Y.
登録日2018-06-07
公開日2018-09-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Discovery of N-(4-{[5-Fluoro-7-(2-methoxyethoxy)quinazolin-4-yl]amino}phenyl)-2-[4-(propan-2-yl)-1 H-1,2,3-triazol-1-yl]acetamide (AZD3229), a Potent Pan-KIT Mutant Inhibitor for the Treatment of Gastrointestinal Stromal Tumors.
J. Med. Chem., 61, 2018
6GXF
DownloadVisualize
BU of 6gxf by Molmil
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: RADDAM1
分子名称: Fluoroacetate dehalogenase
著者Schulz, E.C, Mehrabi, P, Mueller-Werkmeister, H, Tellkamp, F, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E.F, Miller, R.J.D.
登録日2018-06-27
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The hit-and-return system enables efficient time-resolved serial synchrotron crystallography.
Nat. Methods, 15, 2018
6HE4
DownloadVisualize
BU of 6he4 by Molmil
AAA-ATPase ring of PAN-proteasomes
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Majumder, P, Rudack, T, Beck, F, Baumeister, W.
登録日2018-08-20
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.85 Å)
主引用文献Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HEA
DownloadVisualize
BU of 6hea by Molmil
PAN-proteasome in state 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Majumder, P, Rudack, T, Beck, F, Baumeister, W.
登録日2018-08-20
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.04 Å)
主引用文献Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HIG
DownloadVisualize
BU of 6hig by Molmil
hPD-1/NBO1a Fab complex
分子名称: Heavy Chain, Light Chain, Programmed cell death protein 1
著者Loredo-Varela, J.L, Fenwick, C, Pantaleo, G, Weissenhorn, W.
登録日2018-08-29
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Tumor suppression of novel anti-PD-1 antibodies mediated through CD28 costimulatory pathway.
J.Exp.Med., 216, 2019
6IYY
DownloadVisualize
BU of 6iyy by Molmil
Crystal structure of human WIPI3,loop deletion mutant
分子名称: SULFATE ION, WD repeat domain phosphoinositide-interacting protein 3
著者Liang, R.B, Ren, J.Q, Feng, W.
登録日2018-12-17
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural Conservation of the Two Phosphoinositide-Binding Sites in WIPI Proteins.
J. Mol. Biol., 431, 2019
6JOE
DownloadVisualize
BU of 6joe by Molmil
Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
分子名称: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase, ...
著者Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
登録日2019-03-20
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
6JAY
DownloadVisualize
BU of 6jay by Molmil
Crystal structure of Ostrinia furnacalis Group II chitinase catalytic domain 1 in complex with a dipyrido-pyrimidine derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-1-[(furan-2-yl)methyl]-5-oxo-3-({[(2S)-oxolan-2-yl]methyl}carbamoyl)-5H-dipyrido[1,2-a:2',3'-d]pyrimidin-1-ium, Group II chitinase
著者Chen, W, Zhou, Y, Yang, Q.
登録日2019-01-25
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Structural dissection reveals a general mechanistic principle for group II chitinase (ChtII) inhibition.
J.Biol.Chem., 294, 2019
6JBN
DownloadVisualize
BU of 6jbn by Molmil
Crystal structure of Sphingomonas sp. A1 peroxidase EfeB responsible for import of iron
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, OXYGEN MOLECULE, ...
著者Okumura, K, Takase, R, Mikami, B, Murata, K, Hashimoto, W.
登録日2019-01-26
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rare metal binding by a cell-surface component of bacterial EfeUOB iron importer
To Be Published
6JE4
DownloadVisualize
BU of 6je4 by Molmil
Crystal structure of Nme1Cas9-sgRNA-dsDNA dimer mediated by double protein inhibitor AcrIIC3 monomers
分子名称: 1,2-ETHANEDIOL, AcrIIC3, CRISPR-associated endonuclease Cas9, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-04
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.069 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6GYJ
DownloadVisualize
BU of 6gyj by Molmil
Mouse thymidylate synthase crystal soaked in phenolphthalein
分子名称: 3,3-bis(4-hydroxyphenyl)-2-benzofuran-1-one, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Maj, P, Jarmula, A, Wilk, P, Weiss, M.S, Rode, W.
登録日2018-06-30
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Thymidylate synthase fragment screening
To be published
6HR2
DownloadVisualize
BU of 6hr2 by Molmil
Crystal structure of PROTAC 2 in complex with the bromodomain of human SMARCA4 and pVHL:ElonginC:ElonginB
分子名称: (2~{S},4~{R})-~{N}-[[2-[2-[4-[[4-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazin-1-yl]methyl]phenyl]ethoxy]-4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
著者Roy, M, Bader, G, Diers, E, Trainor, N, Farnaby, W, Ciulli, A.
登録日2018-09-26
公開日2019-06-12
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献BAF complex vulnerabilities in cancer demonstrated via structure-based PROTAC design.
Nat.Chem.Biol., 15, 2019
6HH0
DownloadVisualize
BU of 6hh0 by Molmil
Yeast V-ATPase transmembrane helix 7 NMR structure in DPC micelles
分子名称: V-type proton ATPase subunit a, vacuolar isoform
著者Zangger, K, Hohlweg, W, Wagner, G.
登録日2018-08-24
公開日2018-09-12
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A cation-pi interaction in a transmembrane helix of vacuolar ATPase retains the proton-transporting arginine in a hydrophobic environment.
J. Biol. Chem., 293, 2018
6HOG
DownloadVisualize
BU of 6hog by Molmil
Structure of VPS34 LIR motif bound to GABARAP
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein, ...
著者Mouilleron, S, Birgisdottir, A.B, Bhujbal, Z, Wirth, M, Sjottem, E, Evjen, G, Zhang, W, Lee, R, O'Reilly, N, Tooze, S, Lamark, T, Johansen, T.
登録日2018-09-17
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs.
Autophagy, 15, 2019
6IZJ
DownloadVisualize
BU of 6izj by Molmil
Structural characterization of mutated NreA protein in nitrate binding site from Staphylococcus aureus
分子名称: 1,2-ETHANEDIOL, NITRATE ION, NreA
著者Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
登録日2018-12-19
公開日2020-01-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020
6JD7
DownloadVisualize
BU of 6jd7 by Molmil
Crystal structure of anti-CRISPR protein AcrIIC2 dimer
分子名称: ACETATE ION, AcrIIC2, MAGNESIUM ION
著者Cheng, Z, Huang, X, Sun, W, Wang, Y.L.
登録日2019-01-31
公開日2019-05-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Inhibition of CRISPR-Cas9 ribonucleoprotein complex assembly by anti-CRISPR AcrIIC2.
Nat Commun, 10, 2019
6JDV
DownloadVisualize
BU of 6jdv by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in catalytic state
分子名称: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas9, MAGNESIUM ION, ...
著者Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
登録日2019-02-02
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6JCI
DownloadVisualize
BU of 6jci by Molmil
Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746
分子名称: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one, GLYCEROL, Prolyl endopeptidase
著者Li, W, Cao, M.
登録日2019-01-28
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.493 Å)
主引用文献Crystal structure of Haliotis discus hannai Prolyl Endopeptidase
To Be Published
6I66
DownloadVisualize
BU of 6i66 by Molmil
Crystal structure of human ERRg LBD in complex with 4-sec-butylphenol
分子名称: 4-[(2~{R})-butan-2-yl]phenol, Estrogen-related receptor gamma, GLYCEROL
著者Delfosse, V, Blanc, P, Bourguet, W.
登録日2018-11-15
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Insights into the activation mechanism of human estrogen-related receptor gamma by environmental endocrine disruptors.
Cell.Mol.Life Sci., 76, 2019
6I62
DownloadVisualize
BU of 6i62 by Molmil
Crystal structure of human ERRg LBD in complex with HPTE
分子名称: 4,4'-(2,2,2-trichloroethane-1,1-diyl)diphenol, Estrogen-related receptor gamma
著者Delfosse, V, Blanc, P, Bourguet, W.
登録日2018-11-15
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Insights into the activation mechanism of human estrogen-related receptor gamma by environmental endocrine disruptors.
Cell.Mol.Life Sci., 76, 2019
6IPX
DownloadVisualize
BU of 6ipx by Molmil
Crystal structure of the apo form transcription factor
分子名称: AimR transcriptional regulator
著者Oy, S.Y, Zhen, X, Zhou, H, Ding, W.
登録日2018-11-05
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.634 Å)
主引用文献Structural basis of AimP signaling molecule recognition by AimR in Spbeta group of bacteriophages.
Protein Cell, 10, 2019
6HE7
DownloadVisualize
BU of 6he7 by Molmil
20S proteasome from Archaeoglobus fulgidus
分子名称: Proteasome subunit alpha, Proteasome subunit beta
著者Majumder, P, Rudack, T, Beck, F, Baumeister, W.
登録日2018-08-20
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HYO
DownloadVisualize
BU of 6hyo by Molmil
Structure of ULK1 LIR motif bound to GABARAP
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Mouilleron, S, Wirth, M, Zhang, W, O'Reilly, N, Tooze, S, Johansen, T, Razi, M, Nyoni, L, Joshi, D.
登録日2018-10-22
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Nat Commun, 10, 2019

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon