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PDB: 12662 results

2RD7
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Human Complement Membrane Attack Proteins Share a Common Fold with Bacterial Cytolysins
Descriptor: CHLORIDE ION, Complement component C8 alpha chain, Complement component C8 gamma chain
Authors:Slade, D.J, Lovelace, L.L, Chruszcz, M, Minor, W, Lebioda, L, Sodetz, J.M.
Deposit date:2007-09-21
Release date:2008-05-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of human C8 protein provides mechanistic insight into membrane pore formation by complement.
J. Biol. Chem., 286, 2011
2P8E
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Crystal structure of the serine/threonine phosphatase domain of human PPM1B
Descriptor: MAGNESIUM ION, PPM1B beta isoform variant 6
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Lau, C, Xu, W, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-22
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.816 Å)
Cite:Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
2P37
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Crystal structure of a lectin from Canavalia maritima seeds (CML) in complex with man1-3man-OMe
Descriptor: CALCIUM ION, Concanavalin A, MANGANESE (II) ION, ...
Authors:Moreno, F.B.M.B, Bezerra, G.A, Oliveira, T.M, Souza, E.P, Rocha, B.A.M, Benevides, R.G, Delatorre, P, Cavada, B.S, de Azevedo Jr, W.
Deposit date:2007-03-08
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of Canavalia maritima and Canavalia gladiata lectins complexed with different dimannosides: New insights into the understanding of the structure-biological activity relationship in legume lectins.
J.Struct.Biol., 160, 2007
2RJK
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Crystal Structure of Human TL1A Extracellular Domain C95S Mutant
Descriptor: TNF superfamily ligand TL1A
Authors:Zhan, C, Yan, Q, Patskovsky, Y, Shi, W, Ramagopal, U.A, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
Deposit date:2007-10-15
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
2RTU
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Solution structure of oxidized human HMGB1 A box
Descriptor: High mobility group protein B1
Authors:Jing, W, Tochio, N, Tate, S.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Redox-sensitive structural change in the A-domain of HMGB1 and its implication for the binding to cisplatin modified DNA.
Biochem.Biophys.Res.Commun., 441, 2013
1P5T
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Crystal Structure of Dok1 PTB Domain
Descriptor: Docking protein 1
Authors:Shi, N, Ye, S, Liu, Y, Zhou, W, Ding, Y, Lou, Z, Qiang, B, Yuan, J, Rao, Z.
Deposit date:2003-04-28
Release date:2004-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis for the Specific Recognition of RET by the Dok1 Phosphotyrosine Binding Domain
J.BIOL.CHEM., 279, 2004
4KZM
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Crystal Structure of TR3 LBD S553A Mutant
Descriptor: GLYCEROL, Nuclear receptor subfamily 4 group A member 1
Authors:Li, F, Zhang, Q, Li, A, Tian, X, Cai, Q, Wang, W, Wang, Y, Chen, H, Xing, Y, Wu, Q, Lin, T.
Deposit date:2013-05-30
Release date:2013-12-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Orphan nuclear receptor TR3 acts in autophagic cell death via mitochondrial signaling pathway.
Nat.Chem.Biol., 10, 2014
1P6B
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X-ray structure of phosphotriesterase, triple mutant H254G/H257W/L303T
Descriptor: DIETHYL 4-METHYLBENZYLPHOSPHONATE, ETHYL DIHYDROGEN PHOSPHATE, Parathion hydrolase, ...
Authors:Hill, C.M, Li, W, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2003-04-29
Release date:2003-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enhanced degradation of chemical warfare agents through molecular engineering of the phosphotriesterase active site.
J.Am.Chem.Soc., 125, 2003
4OI3
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Crystal structure analysis of SCO4226 from Streptomyces coelicolor A3(2)
Descriptor: Nickel responsive protein
Authors:Lu, M, Jiang, Y.L, Wang, S, Cheng, W, Zhang, R.G, Virolle, M.J, Chen, Y, Zhou, C.Z.
Deposit date:2014-01-18
Release date:2014-09-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Streptomyces coelicolor SCO4226 Is a Nickel Binding Protein.
Plos One, 9, 2014
1PGV
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Structural Genomics of Caenorhabditis elegans: tropomodulin C-terminal domain
Descriptor: tropomodulin TMD-1
Authors:Symersky, J, Lu, S, Li, S, Chen, L, Meehan, E, Luo, M, Qiu, S, Bunzel, R.J, Luo, D, Arabashi, A, Nagy, L.A, Lin, G, Luan, W.C.-H, Carson, M, Gray, R, Huang, W, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2003-05-28
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural genomics of Caenorhabditis elegans: crystal structure of the tropomodulin C-terminal domain
Proteins, 56, 2004
4OB1
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Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to Butaneboronic Acid via Co-crystallization
Descriptor: 1-BUTANE BORONIC ACID, COBALT (II) ION, Cobalt-containing nitrile hydratase subunit alpha, ...
Authors:Rui, W, Salette, M, Ruslan, S, Richard, H, Dali, L.
Deposit date:2014-01-06
Release date:2014-11-26
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:The active site sulfenic acid ligand in nitrile hydratases can function as a nucleophile.
J.Am.Chem.Soc., 136, 2014
4O8C
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Structure of the H170Y mutant of thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus
Descriptor: MAGNESIUM ION, SULFATE ION, Thermostable NPPase
Authors:Shen, T, Guo, Z, Wang, F, Gong, W, Ji, C.
Deposit date:2013-12-27
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a His170Tyr mutant of thermostable pNPPase from Geobacillus stearothermophilus.
Acta Crystallogr.,Sect.F, 70, 2014
4LTV
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BU of 4ltv by Molmil
Crystal structure of epi-isozizaene synthase from Streptomyces coelicolor A3(2)
Descriptor: Epi-isozizaene synthase, SULFATE ION
Authors:Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
Deposit date:2013-07-24
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
4LZC
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BU of 4lzc by Molmil
W325F Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate
Descriptor: Epi-isozizaene synthase, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
Deposit date:2013-07-31
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.457 Å)
Cite:Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
4LZ0
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A236G Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
Descriptor: Epi-isozizaene synthase, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
Authors:Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
Deposit date:2013-07-31
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.754 Å)
Cite:Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
4QB5
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BU of 4qb5 by Molmil
Crystal structure of a glyoxalase/bleomycin resistance protein from Albidiferax ferrireducens T118
Descriptor: 1,2-ETHANEDIOL, Glyoxalase/bleomycin resistance protein/dioxygenase, SULFATE ION
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-05-06
Release date:2014-07-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a glyoxalase/bleomycin resistance protein from Albidiferax ferrireducens T118
To be Published
4PVK
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Phl p 4 I153V N158H variant, a glucose oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, MALONATE ION, ...
Authors:Zafred, D, Teufelberger, A, Keller, W, Macheroux, P.
Deposit date:2014-03-17
Release date:2014-04-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
4M1A
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BU of 4m1a by Molmil
Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella termitidis ATCC 33386
Descriptor: Hypothetical protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-02
Release date:2013-08-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Domain of unknown function (DUF1904) from Sebaldellatermitidis ATCC 33386
To be Published
6HRK
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BU of 6hrk by Molmil
Structure of a far-red fluorescent biliprotein derived from a far-red induced allophycocyanin F subunit from a thermophilic cyanobacterium Chroococcidiopsis thermalis
Descriptor: Allophycocyanin beta-18 subunit apoprotein, BILIVERDINE IX ALPHA
Authors:Hou, Y.-N, Hoeppner, A, Ding, W.-L, Gaertner, W, Zhao, K.-H.
Deposit date:2018-09-27
Release date:2019-10-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Control of a far-red/near-infrared spectral switch in an artificial fluorescent biliprotein derived from allophycocyanin
Protein Sci., Suppl.: Diskette Appendix To V. , No. , [Month], Filename:, 31, 2022
4PVH
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BU of 4pvh by Molmil
Phl p 4 N158H variant, a glucose dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MALONATE ION, Pollen allergen Phl p 4.0202, ...
Authors:Zafred, D, Teufelberger, A, Keller, W, Macheroux, P.
Deposit date:2014-03-17
Release date:2014-04-02
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
6HAA
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BU of 6haa by Molmil
Structure of a covalent complex of endo-Xyloglucanase from Cellvibrio japonicus after reacting with XXXG(2F)-beta-DNP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cellulase, putative, ...
Authors:Offen, W, Davies, G.J.
Deposit date:2018-08-07
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis and application of a highly branched, mechanism-based 2-deoxy-2-fluoro-oligosaccharide inhibitor of endo-xyloglucanases.
Org. Biomol. Chem., 16, 2018
1O2K
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Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
1O2P
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Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-6-CHLORO-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
4PZI
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BU of 4pzi by Molmil
Zinc finger region of MLL2 in complex with CpG DNA
Descriptor: DNA (5'-D(*GP*CP*CP*AP*CP*CP*GP*GP*TP*GP*GP*C)-3'), Histone-lysine N-methyltransferase 2B, UNKNOWN ATOM OR ION, ...
Authors:Chao, X, Tempel, W, Liu, K, Dong, A, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2014-03-31
Release date:2014-06-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure, 26, 2018
3IRC
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BU of 3irc by Molmil
Crystal structure analysis of dengue-1 envelope protein domain III
Descriptor: ENVELOPE PROTEIN, SULFATE ION
Authors:Nelson, C.A, Kim, T, Warren, J.T, Chruszcz, M, Minor, W, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-21
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure Analysis of the Dengue-1 Envelope Protein Domain III
To be Published

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