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PDB: 12662 results

4BSP
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BU of 4bsp by Molmil
Crystal structure of R-spondin 1 (Fu1Fu2) - Holmium soak
Descriptor: HOLMIUM ATOM, R-SPONDIN-1, SULFATE ION
Authors:Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
Deposit date:2013-06-11
Release date:2013-06-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4FQB
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BU of 4fqb by Molmil
crystal structure of toxic effector Tse1 in complex with immune protein Tsi1
Descriptor: immune protein Tsi1, toxic effector Tse1
Authors:Wang, T, Li, L, Zhang, W.
Deposit date:2012-06-25
Release date:2013-06-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:structural basis of Tse1 in complex with Tsi1
To be Published
4F0Z
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BU of 4f0z by Molmil
Crystal Structure of Calcineurin in Complex with the Calcineurin-Inhibiting Domain of the African Swine Fever Virus Protein A238L
Descriptor: Ankyrin repeat domain-containing protein A238L, CALCIUM ION, Calcineurin subunit B type 1, ...
Authors:Grigoriu, S, Peti, W, Page, R.
Deposit date:2012-05-05
Release date:2013-03-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The molecular mechanism of substrate engagement and immunosuppressant inhibition of calcineurin.
Plos Biol., 11, 2013
4F2Z
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BU of 4f2z by Molmil
Crystal structure of RPE65 in a lipid environment
Descriptor: FE (II) ION, Retinoid isomerohydrolase
Authors:Kiser, P.D, Shi, W, Palczewski, K.
Deposit date:2012-05-08
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of RPE65 isomerase in a lipidic matrix reveals roles for phospholipids and iron in catalysis.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F7W
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BU of 4f7w by Molmil
Crystal structure of Klebsiella pneumoniae pantothenate kinase in complex with N-pentylpantothenamide
Descriptor: (2R)-2,4-dihydroxy-3,3-dimethyl-N-[3-oxo-3-(pentylamino)propyl]butanamide, ADENOSINE-5'-DIPHOSPHATE, Pantothenate kinase, ...
Authors:Li, B, Tempel, W, Smil, D, Bolshan, Y, Hong, B.S, Park, H.W, Structural Genomics Consortium (SGC)
Deposit date:2012-05-16
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of Klebsiella pneumoniae pantothenate kinase in complex with N-substituted pantothenamides.
Proteins, 81, 2013
4FLA
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BU of 4fla by Molmil
Crystal structure of human RPRD1B, carboxy-terminal domain
Descriptor: Regulation of nuclear pre-mRNA domain-containing protein 1B, UNKNOWN ATOM OR ION
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2012-06-14
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
4FLB
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BU of 4flb by Molmil
CID of human RPRD2
Descriptor: PRASEODYMIUM ION, Regulation of nuclear pre-mRNA domain-containing protein 2, SULFATE ION, ...
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2012-06-14
Release date:2012-08-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
4FLN
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BU of 4fln by Molmil
Crystal structure of plant protease Deg2
Descriptor: Protease Do-like 2, chloroplastic, Unknown peptide
Authors:Gong, W, Liu, L, Sun, R, Gao, F.
Deposit date:2012-06-15
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Arabidopsis deg2 protein reveals an internal PDZ ligand locking the hexameric resting state.
J.Biol.Chem., 287, 2012
4FP6
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DNA octamer d(gtggccac) with 2'-se modification
Descriptor: CHLORIDE ION, DNA (5'-D(*GP*(2ST)P*GP*GP*CP*CP*AP*C)-3')
Authors:Zhang, W, Sheng, J, Huang, Z.
Deposit date:2012-06-21
Release date:2012-08-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:DNA octamer d(gtggccac) with 2'-se modification
TO BE PUBLISHED
4FQ3
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BU of 4fq3 by Molmil
Crystal structure of transportin/FUS-NLS
Descriptor: Fusion (Involved in t(12;16) in malignant liposarcoma), Transportin-1
Authors:Gong, W, Niu, C, Jia, M, Gao, F.
Deposit date:2012-06-25
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of transportin/FUS-NLS
To be Published
4FQS
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BU of 4fqs by Molmil
Crystal Structure of Mycobacterium tuberculosis ThyA in complex with UMP and Pemetrexed
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, Thymidylate synthase
Authors:Reddy, M.C.M, Bruning, J.B, Harshbarger, W, Sacchettini, J.C.
Deposit date:2012-06-25
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of binary and ternary complexes of thymidylate synthase (ThyA) from Mycobacterium tuberculosis: insights into the selectivity and mode of inhibition
To be Published
4FHQ
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BU of 4fhq by Molmil
Crystal Structure of HVEM
Descriptor: Tumor necrosis factor receptor superfamily member 14
Authors:Liu, W, Zhan, C, Patskovsky, Y, Bhosle, R.C, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-06-06
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Increased Heterologous Protein Expression in Drosophila S2 Cells for Massive Production of Immune Ligands/Receptors and Structural Analysis of Human HVEM.
Mol Biotechnol, 57, 2015
4FLL
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BU of 4fll by Molmil
Human MetAP1 with bengamide analog YZ6, in Mn form
Descriptor: (E,2R,3R,4S,5R)-N-[(3R)-3-(furan-2-yl)-3-phenyl-propyl]-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
Authors:Ye, Q.Z, Xu, W.
Deposit date:2012-06-14
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
4FK3
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BU of 4fk3 by Molmil
B-Raf Kinase V600E Oncogenic Mutant in Complex with PLX3203
Descriptor: N-{2,4-difluoro-3-[(5-pyridin-3-yl-1H-pyrrolo[2,3-b]pyridin-3-yl)carbonyl]phenyl}ethanesulfonamide, Serine/threonine-protein kinase B-raf
Authors:Zhang, Y, Wang, W, Zhang, K.Y.J.
Deposit date:2012-06-12
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of a selective inhibitor of oncogenic B-Raf kinase with potent antimelanoma activity.
Proc.Natl.Acad.Sci.USA, 105, 2008
4FL6
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BU of 4fl6 by Molmil
Crystal structure of the complex of the 3-MBT repeat domain of L3MBTL3 and UNC1215
Descriptor: Lethal(3)malignant brain tumor-like protein 3, UNKNOWN ATOM OR ION, [2-(phenylamino)benzene-1,4-diyl]bis{[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone}
Authors:Zhong, N, Tempel, W, Ravichandran, M, Dong, A, Ingerman, L.A, Graslund, S, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2012-06-14
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Discovery of a chemical probe for the L3MBTL3 methyllysine reader domain.
Nat. Chem. Biol., 9, 2013
4FO9
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BU of 4fo9 by Molmil
Crystal structure of the E3 SUMO Ligase PIAS2
Descriptor: E3 SUMO-protein ligase PIAS2, UNKNOWN ATOM OR ION, ZINC ION
Authors:Dong, A, Hu, J, Dobrovetsky, E, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2012-06-20
Release date:2012-07-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of the E3 SUMO Ligase PIAS2
to be published
4FLK
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BU of 4flk by Molmil
Human MetAP1 with bengamide analog Y10, in Mn form
Descriptor: (E,2R,3R,4S,5R)-N-(2,3-dihydro-1H-inden-2-yl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
Authors:Ye, Q.Z, Xu, W.
Deposit date:2012-06-14
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
4FQX
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BU of 4fqx by Molmil
Crystal structure of HLA-DM bound to HLA-DR1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DM alpha chain, ...
Authors:Sethi, D.K, Pos, W, Wucherpfennig, K.W.
Deposit date:2012-06-25
Release date:2013-01-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Crystal Structure of the HLA-DM-HLA-DR1 Complex Defines Mechanisms for Rapid Peptide Selection.
Cell(Cambridge,Mass.), 151, 2012
4FLI
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BU of 4fli by Molmil
Human MetAP1 with bengamide analog Y16, in Mn form
Descriptor: (E,2R,3R,4S,5R)-N-(2-azanyl-2-oxidanylidene-ethyl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
Authors:Ye, Q.Z, Xu, W.
Deposit date:2012-06-14
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
4FK7
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BU of 4fk7 by Molmil
Crystal structure of Certhrax catalytic domain
Descriptor: CHLORIDE ION, N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, Putative ADP-ribosyltransferase Certhrax, ...
Authors:Hong, B.S, Dimov, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2012-06-12
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Certhrax Toxin, an Anthrax-related ADP-ribosyltransferase from Bacillus cereus.
J.Biol.Chem., 287, 2012
4FMM
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BU of 4fmm by Molmil
Dimeric Sec14 family homolog 3 from Saccharomyces cerevisiae presents some novel features of structure that lead to a surprising "dimer-monomer" state change induced by substrate binding
Descriptor: GLYCEROL, MAGNESIUM ION, Phosphatidylinositol transfer protein PDR16
Authors:Yuan, Y, Zhao, W, Wang, X, Gao, Y, Niu, L, Teng, M.
Deposit date:2012-06-18
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Dimeric Sfh3 has structural changes in its binding pocket that are associated with a dimer-monomer state transformation induced by substrate binding.
Acta Crystallogr.,Sect.D, 69, 2013
4FMW
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BU of 4fmw by Molmil
Crystal structure of methyltransferase domain of human RNA (guanine-9-) methyltransferase domain containing protein 2
Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, RNA (guanine-9-)-methyltransferase domain-containing protein 2, ...
Authors:Dong, A, Zeng, H, Loppnau, P, Tempel, W, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-06-18
Release date:2012-08-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of methyltransferase domain of human RNA (guanine-9-) methyltransferase domain containing protein 2
TO BE PUBLISHED
4FLJ
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BU of 4flj by Molmil
Human MetAP1 with bengamide analog Y08, in Mn form
Descriptor: (E,2R,3R,4S,5R)-N-[[(3S)-1-cyclopropylcarbonylpiperidin-3-yl]methyl]-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
Authors:Ye, Q.Z, Xu, W.
Deposit date:2012-06-14
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
8GZD
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BU of 8gzd by Molmil
CRYSTAL STRUCTURE OF A NOVEL ALPHA/BETA HYDROLASE FROM THERMOMONOSPORA CURVATA IN APO FORM
Descriptor: Triacylglycerol lipase
Authors:Han, X, Gao, J, Bornscheuer, U.T, Wei, R, Liu, W.
Deposit date:2022-09-26
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:CRYSTAL STRUCTURE OF A NOVEL ALPHA/BETA HYDROLASE FROM THERMOMONOSPORA CURVATA IN APO FORM
To Be Published
5ZQG
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BU of 5zqg by Molmil
Complex structure of PEDV 3CLpro mutant (C144A) with NEMO-231 peptite substrate
Descriptor: Non-structural protein, PEPTIDE LEU-ALA-GLN-LEU-GLN-VAL-ALA
Authors:Gang, Y, Chen, J.Y, Dang, W, Xiao, S.B, Peng, G.Q.
Deposit date:2018-04-18
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Complex structure of PEDV 3CLpro mutant (C144A) with NEMO peptite substrate
To Be Published

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