Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34568 results

4IAA
DownloadVisualize
BU of 4iaa by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with thioridazine
Descriptor: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Serine/threonine-protein kinase pim-1
Authors:Zhang, W, Wan, X, Li, W, Xie, Y, Huang, N.
Deposit date:2012-12-06
Release date:2013-12-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of Ser/Thr kinase Pim1 in complex with thioridazine
To be Published
4DNM
DownloadVisualize
BU of 4dnm by Molmil
Crystal structure of an amidohydrolase (cog3618) from burkholderia multivorans (target efi-500235) with bound hepes, space group p3221
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Amidohydrolase 2, GLYCEROL, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Seidel, R.D, Hillerich, B, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Al Obaidi, N.F, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Raushel, F.M, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-08
Release date:2012-02-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of an amidohydrolase (cog3618) from burkholderia multivorans (target efi-500235) with bound hepes, space group p3221
to be published
4X3Z
DownloadVisualize
BU of 4x3z by Molmil
Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP and NAD
Descriptor: GLYCEROL, Inosine-5'-monophosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Osipiuk, J, MALTSEVA, N, KIM, Y, Mulligan, R, MAKOWSKA-GRZYSKA, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-12-02
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP and NAD
to be published
6M0X
DownloadVisualize
BU of 6m0x by Molmil
Crystal structure of Streptococcus thermophilus Cas9 in complex with AGGA PAM
Descriptor: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
Authors:Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
Deposit date:2020-02-23
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.561 Å)
Cite:Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
5L7J
DownloadVisualize
BU of 5l7j by Molmil
Crystal Structure of Elp3 from Dehalococcoides mccartyi
Descriptor: ELP3 family, FE2/S2 (INORGANIC) CLUSTER, ZINC ION
Authors:Glatt, S, Mueller, C.W.
Deposit date:2016-06-03
Release date:2016-08-03
Last modified:2016-09-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for tRNA modification by Elp3 from Dehalococcoides mccartyi.
Nat.Struct.Mol.Biol., 23, 2016
2INT
DownloadVisualize
BU of 2int by Molmil
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN INTERLEUKIN-4
Descriptor: INTERLEUKIN-4
Authors:Walter, M.R, Cook, W.J, Zhao, B.G, Cameron Junior, R, Ealick, S.E, Walter Junior, R.L, Reichert, P, Nagabhushan, T.L, Trotta, P.P, Bugg, C.E.
Deposit date:1993-07-22
Release date:1994-01-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of recombinant human interleukin-4.
J.Biol.Chem., 267, 1992
5L94
DownloadVisualize
BU of 5l94 by Molmil
The 2.25 A crystal structure of CYP109E1 from Bacillus megaterium in complex with testosterone
Descriptor: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, TESTOSTERONE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2016-06-09
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of steroid binding and oxidation by the cytochrome P450 CYP109E1 from Bacillus megaterium.
Febs J., 283, 2016
4HO0
DownloadVisualize
BU of 4ho0 by Molmil
Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus
Descriptor: Glucose-1-phosphate thymidylyltransferase, SULFATE ION
Authors:Chen, T.J, Chien, W.T, Lin, C.C, Wang, W.C.
Deposit date:2012-10-22
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus
TO BE PUBLISHED
2IT0
DownloadVisualize
BU of 2it0 by Molmil
Crystal structure of a two-domain IdeR-DNA complex crystal form II
Descriptor: ACETATE ION, Iron-dependent repressor ideR, NICKEL (II) ION, ...
Authors:Wisedchaisri, G, Chou, C.J, Wu, M, Roach, C, Rice, A.E, Holmes, R.K, Beeson, C, Hol, W.G.
Deposit date:2006-10-18
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis
Biochemistry, 46, 2007
4HO4
DownloadVisualize
BU of 4ho4 by Molmil
Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine and glucose-1-phosphate
Descriptor: 1-O-phosphono-alpha-D-glucopyranose, Glucose-1-phosphate thymidylyltransferase, SULFATE ION, ...
Authors:Chen, T.J, Chien, W.T, Lin, C.C, Wang, W.C.
Deposit date:2012-10-22
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with thymidine and glucose-1-phosphate
TO BE PUBLISHED
4HO9
DownloadVisualize
BU of 4ho9 by Molmil
Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-galactose and UTP
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, Glucose-1-phosphate thymidylyltransferase, SULFATE ION, ...
Authors:Chen, T.J, Chien, W.T, Lin, C.C, Wang, W.C.
Deposit date:2012-10-22
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of glucose 1-phosphate thymidylyltransferase from Aneurinibacillus thermoaerophilus complexed with UDP-galactose and UTP
TO BE PUBLISHED
7KIL
DownloadVisualize
BU of 7kil by Molmil
Crystal structure of the mouse lipin-1 M-Lip domain with zinc
Descriptor: CHLORIDE ION, Isoform 2 of Phosphatidate phosphatase LPIN1, ZINC ION
Authors:Gu, W, Airola, M.V.
Deposit date:2020-10-23
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:The middle lipin domain adopts a membrane-binding dimeric protein fold.
Nat Commun, 12, 2021
4X6B
DownloadVisualize
BU of 4x6b by Molmil
BK6 TCR apo structure
Descriptor: TCR alpha, TCR beta
Authors:Birkinshaw, R.W, Rossjohn, J.
Deposit date:2014-12-07
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:alpha beta T cell antigen receptor recognition of CD1a presenting self lipid ligands.
Nat.Immunol., 16, 2015
1JT8
DownloadVisualize
BU of 1jt8 by Molmil
ARCHAEAL INITIATION FACTOR-1A, AIF-1A
Descriptor: PROBABLE TRANSLATION INITIATION FACTOR 1A
Authors:Hoffman, D.W, Li, W.
Deposit date:2001-08-20
Release date:2001-09-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of translation initiation factor aIF-1A from the archaeon Methanococcus jannaschii determined by NMR spectroscopy
Protein Sci., 10, 2001
4DLF
DownloadVisualize
BU of 4dlf by Molmil
Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (TARGET EFI-500235) with bound ZN, space group P3221
Descriptor: Amidohydrolase 2, GLYCEROL, UNKNOWN ATOM OR ION, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Seidel, R.D, Hillerich, B, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Al Obaidi, N.F, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Raushel, F.M, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-06
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.925 Å)
Cite:Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (target efi-500235) with bound ZN, space group P3221
to be published
1XC5
DownloadVisualize
BU of 1xc5 by Molmil
Solution Structure of the SMRT Deacetylase Activation Domain
Descriptor: Nuclear receptor corepressor 2
Authors:Codina, A, Love, J.D, Li, Y, Lazar, M.A, Neuhaus, D, Schwabe, J.W.R.
Deposit date:2004-09-01
Release date:2005-05-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insights into the interaction and activation of histone deacetylase 3 by nuclear receptor corepressors
Proc.Natl.Acad.Sci.Usa, 102, 2005
4X8R
DownloadVisualize
BU of 4x8r by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM Rhodobacter sphaeroides (Rsph17029_2138, TARGET EFI-510205) WITH BOUND Glucuronate
Descriptor: PHOSPHATE ION, TRAP dicarboxylate transporter, DctP subunit, ...
Authors:Yadava, U, Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-12-10
Release date:2014-12-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM Rhodobacter sphaeroides (Rsph17029_2138, TARGET EFI-510205) WITH BOUND Glucuronate
To be published
6MEW
DownloadVisualize
BU of 6mew by Molmil
RFXANK ankyrin repeats in complex with a RFX7 peptide
Descriptor: DNA-binding protein RFXANK, RFX7 peptide, UNKNOWN ATOM OR ION
Authors:Tempel, W, Xu, C, Dong, A, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2018-09-07
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:RFXANK ankyrin repeats in complex with a RFX7 peptide
to be published
3NZ2
DownloadVisualize
BU of 3nz2 by Molmil
Crystal Structure of Hexapeptide-Repeat containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A from Vibrio cholerae O1 biovar eltor
Descriptor: 1,4-BUTANEDIOL, ACETIC ACID, ACETYL COENZYME *A, ...
Authors:Kim, Y, Maltseva, N, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-07-15
Release date:2010-08-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Hexapeptide-Repeat containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A from Vibrio cholerae O1 biovar eltor
To be Published
5KYW
DownloadVisualize
BU of 5kyw by Molmil
crystal structure of Sec23 and TANGO1 peptide3 complex
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24D, TANGO1 peptide3, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2016-07-22
Release date:2016-09-07
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KZT
DownloadVisualize
BU of 5kzt by Molmil
Listeria monocytogenes OppA bound to peptide
Descriptor: Hexamer peptide: SER-ASP-GLU-SER-LYS-GLY, Hexamer peptide: SER-ASP-GLU-SER-SER-GLY, Peptide/nickel transport system substrate-binding protein
Authors:Light, S.H, Whiteley, A.T, Minasov, G, Portnoy, D.A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-07-25
Release date:2016-08-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Listeria monocytogenes OppA bound to peptide
To Be Published
4X37
DownloadVisualize
BU of 4x37 by Molmil
Gallus interleukin-1 mutant - E118K
Descriptor: IL-1 beta
Authors:Yin, H.S, Cheng, W.T, Cheng, T.
Deposit date:2014-11-28
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Gallus interleukin-1 mutant - E118K
To Be Published
7WI6
DownloadVisualize
BU of 7wi6 by Molmil
Cryo-EM structure of LY341495/NAM-bound mGlu3
Descriptor: 2-[(1S,2S)-2-carboxycyclopropyl]-3-(9H-xanthen-9-yl)-D-alanine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
Authors:Fang, W, Yang, F, Xu, C.J, Ling, S.L, Lin, L, Zhou, Y.X, Sun, W.J, Wang, X.M, Liu, P, Rondard, P, Pan, S, Pin, J.P, Tian, C.L, Liu, J.F.
Deposit date:2022-01-03
Release date:2022-03-16
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Structural basis of the activation of metabotropic glutamate receptor 3.
Cell Res., 32, 2022
4HYW
DownloadVisualize
BU of 4hyw by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei in the presence of Magnesium and F26BP
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, CHLORIDE ION, GLYCEROL, ...
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2012-11-14
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:`In crystallo' substrate binding triggers major domain movements and reveals magnesium as a co-activator of Trypanosoma brucei pyruvate kinase.
Acta Crystallogr.,Sect.D, 69, 2013
5TJ9
DownloadVisualize
BU of 5tj9 by Molmil
2.6 Angstrom Crystal Structure of S-adenosylhomocysteinase from Cryptosporidium parvum in Complex with Aristeromycin and NAD
Descriptor: (1R,2S,3R,5R)-3-(6-amino-9H-purin-9-yl)-5-(hydroxymethyl)cyclopentane-1,2-diol, Adenosylhomocysteinase, DI(HYDROXYETHYL)ETHER, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Bishop, B, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-10-04
Release date:2016-10-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:2.6 Angstrom Crystal Structure of S-adenosylhomocysteinase from Cryptosporidium parvum in Complex with Aristeromycin and NAD
To Be Published

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon