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PDB: 61 件
3O3I
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Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OH at its 3'-end
分子名称: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*U)-3')
著者Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
登録日2010-07-24
公開日2011-01-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O7X
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Crystal structure of human Hili PAZ domain
分子名称: Piwi-like protein 2
著者Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
登録日2010-08-01
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9248 Å)
主引用文献Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O7V
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Crystal Structure of human Hiwi1 (V361M) PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end
分子名称: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
著者Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
登録日2010-08-01
公開日2011-01-12
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
3O6E
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BU of 3o6e by Molmil
Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end
分子名称: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3')
著者Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J.
登録日2010-07-28
公開日2011-01-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
4OJX
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BU of 4ojx by Molmil
crystal structure of yeast phosphodiesterase-1 in complex with GMP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, GUANOSINE-5'-MONOPHOSPHATE, ...
著者Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
登録日2014-01-21
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014
4OJV
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Crystal structure of unliganded yeast PDE1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3',5'-cyclic-nucleotide phosphodiesterase 1, SULFATE ION, ...
著者Tian, Y, Cui, W, Huang, M, Robinson, H, Wan, Y, Wang, Y, Ke, H.
登録日2014-01-21
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.
Biochemistry, 53, 2014
3RIU
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BU of 3riu by Molmil
Crystal structure of Drosophila hexameric C3PO formed by truncated Translin and Trax
分子名称: Translin, Translin associated factor X, isoform B
著者Tian, Y, Simanshu, D.K, Patel, D.J.
登録日2011-04-14
公開日2011-05-11
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Multimeric assembly and biochemical characterization of the Trax-translin endonuclease complex.
Nat.Struct.Mol.Biol., 18, 2011
7SA4
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BU of 7sa4 by Molmil
Damaged 70S ribosome with PrfH bound
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Tian, Y, Zeng, F, Raybarman, A, Carruthers, A, Li, Q, Fatma, S, Huang, R.H.
登録日2021-09-22
公開日2022-08-03
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Sequential rescue and repair of stalled and damaged ribosome by bacterial PrfH and RtcB.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TWD
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BU of 7twd by Molmil
Structure of AAGAB C-terminal dimerization domain
分子名称: Alpha- and gamma-adaptin-binding protein p34, PHOSPHATE ION
著者Tian, Y, Yin, Q.
登録日2022-02-07
公開日2023-01-18
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Oligomer-to-monomer transition underlies the chaperone function of AAGAB in AP1/AP2 assembly.
Proc.Natl.Acad.Sci.USA, 120, 2023
4NGD
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Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having 5'-p and UU-3' ends (1.95 Angstrom resolution)
分子名称: 5'-R(P*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', DI(HYDROXYETHYL)ETHER, Endoribonuclease Dicer, ...
著者Tian, Y, Simanshu, D.K, Patel, D.J.
登録日2013-11-01
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.958 Å)
主引用文献A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
4NH5
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BU of 4nh5 by Molmil
Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 14-mer siRNA having 5'-pUU and UU-3' ends (2.55 Angstrom resolution)
分子名称: 5'-R(P*UP*UP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', Endoribonuclease Dicer
著者Tian, Y, Simanshu, D.K, Patel, D.J.
登録日2013-11-04
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
2MOZ
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BU of 2moz by Molmil
Structure of the Membrane Protein MerF, a Bacterial Mercury Transporter, Improved by the Inclusion of Chemical Shift Anisotropy Constraints
分子名称: MerF
著者Tian, Y, Lu, G.J, Marassi, F.M, Opella, S.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
登録日2014-05-07
公開日2014-07-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the membrane protein MerF, a bacterial mercury transporter, improved by the inclusion of chemical shift anisotropy constraints.
J.Biomol.Nmr, 60, 2014
6OE9
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BU of 6oe9 by Molmil
Crystal structure of p204 HIN1 domain
分子名称: GLYCEROL, Interferon-activable protein 204, SULFATE ION
著者Tian, Y, Yin, Q.
登録日2019-03-27
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural analysis of the HIN1 domain of interferon-inducible protein 204.
Acta Crystallogr.,Sect.F, 75, 2019
7ESH
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BU of 7esh by Molmil
Crystal structure of amylosucrase from Calidithermus timidus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, amylosucrase
著者Tian, Y, Hou, X, Ni, D, Xu, W, Guang, C, Zhang, W, Rao, Y, Mu, W.
登録日2021-05-10
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure-based interface engineering methodology in designing a thermostable amylose-forming transglucosylase
J.Biol.Chem., 298, 2022
6X7I
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BU of 6x7i by Molmil
Structure of the C-terminal domain of BCL-XL in membrane
分子名称: Bcl-2-like protein 1
著者Yao, Y, Tian, Y, Marassi, F.M.
登録日2020-05-30
公開日2020-07-01
最終更新日2024-05-15
実験手法SOLID-STATE NMR, SOLUTION NMR
主引用文献Conformational States of the Cytoprotective Protein Bcl-xL.
Biophys.J., 119, 2020
4WQN
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BU of 4wqn by Molmil
Crystal structure of N6-methyladenosine RNA reader YTHDF2
分子名称: 1,2-ETHANEDIOL, GLYCEROL, YTH domain-containing family protein 2
著者Zhu, T, Roundtree, I.A, Wang, P, Wang, X, Wang, L, Sun, C, Tian, Y, Li, J, He, C, Xu, Y.
登録日2014-10-22
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.121 Å)
主引用文献Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine.
Cell Res., 24, 2014
4YCG
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BU of 4ycg by Molmil
Pro-bone morphogenetic protein 9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bone Morphogenetic Protein 9 Growth Factor Domain, Bone Morphogenetic Protein 9 Prodomain, ...
著者Mi, L.-Z, Brown, C.T, Gao, Y, Tian, Y, Le, V, Walz, T, Springer, T.A.
登録日2015-02-20
公開日2015-03-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of bone morphogenetic protein 9 procomplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YCI
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BU of 4yci by Molmil
non-latent pro-bone morphogenetic protein 9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bone Morphogenetic Protein 9 Growth Factor Domain, ...
著者Mi, L.Z, Brown, C.T, Gao, Y, Tian, Y, Le, V, Walz, T, Springer, T.A.
登録日2015-02-20
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structure of bone morphogenetic protein 9 procomplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
7M1S
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BU of 7m1s by Molmil
Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
分子名称: Guanylate-binding protein 2, PHOSPHATE ION
著者Roy, S, Wang, B, Tian, Y, Yin, Q.
登録日2021-03-15
公開日2022-04-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
To Be Published
2H3H
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BU of 2h3h by Molmil
Crystal structure of the liganded form of Thermotoga maritima glucose binding protein
分子名称: Sugar ABC transporter, periplasmic sugar-binding protein, beta-D-glucopyranose
著者Changela, A, Tian, Y.
登録日2006-05-22
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-based design of robust glucose biosensors using a Thermotoga maritima periplasmic glucose-binding protein.
Protein Sci., 16, 2007
6VKJ
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BU of 6vkj by Molmil
Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanylate-binding protein 2
著者Roy, S, Wang, B, Tian, Y, Yin, Q.
登録日2020-01-21
公開日2021-01-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献Crystal structure of the G domain of human guanylate-binding protein 2 (hGBP2) in complex with GDP
To Be Published
7S0N
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BU of 7s0n by Molmil
Structure of MS3494 from Mycobacterium Smegmatis determined by Solution NMR
分子名称: Secreted protein
著者Kent, J.E, Tian, Y, Shin, K, Zhang, L, Niederweis, M, Marassi, F.M.
登録日2021-08-30
公開日2021-10-06
実験手法SOLUTION NMR
主引用文献Structure of MS3494 from Mycobacterium Smegmatis
To Be Published
6IGM
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BU of 6igm by Molmil
Cryo-EM Structure of Human SRCAP Complex
分子名称: Actin-related protein 6, Helicase SRCAP, RuvB-like 1, ...
著者Feng, Y, Tian, Y, Wu, Z, Xu, Y.
登録日2018-09-25
公開日2019-07-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of human SRCAP complex.
Cell Res., 28, 2018
2N2L
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BU of 2n2l by Molmil
NMR structure of yersinia pestis ail (attachment invasion locus) in decylphosphocholine micelles calculated with implicit membrane solvation
分子名称: Outer membrane protein X
著者Marassi, F.M, Ding, Y, Tian, Y, Schwieters, C.D, Yao, Y.
登録日2015-05-10
公開日2015-07-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
J.Biomol.Nmr, 63, 2015
5AC3
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BU of 5ac3 by Molmil
Crystal structure of PAM12A
分子名称: ACETIC ACID, CADMIUM ION, PEPTIDE AMIDASE
著者Wu, B, Wijma, H.J, Song, L, Rozeboom, H.J, Poloni, C, Tian, Y, Arif, M.I, Nuijens, T, Quadflieg, P.J.L.M, Szymanski, W, Feringa, B.L, Janssen, D.B.
登録日2015-08-11
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Versatile Peptide C-Terminal Functionalization Via a Computationally Peptide Amidase
Acs Catalysis, 2016

 

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