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PDB: 118 件

8D49
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Structure of Cas12a2 binary complex
分子名称: OrfB_Zn_ribbon domain-containing protein, RNA (26-MER)
著者Bravo, J.P.K, Taylor, D.W.
登録日2022-06-01
公開日2023-01-18
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献RNA targeting unleashes indiscriminate nuclease activity of CRISPR-Cas12a2.
Nature, 613, 2023
8D4B
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Structure of Cas12a2 ternary complex
分子名称: OrfB_Zn_ribbon domain-containing protein, RNA (28-MER), RNA (41-MER)
著者Bravo, J.P.K, Taylor, D.W.
登録日2022-06-01
公開日2023-01-18
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献RNA targeting unleashes indiscriminate nuclease activity of CRISPR-Cas12a2.
Nature, 613, 2023
7MEJ
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CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb21 and Nb36
分子名称: Nanobody Nb21, Nanobody Nb36, Spike protein S1
著者Huang, W, Taylor, D.J.
登録日2021-04-06
公開日2021-08-11
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021
7ME7
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CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb17 and Nb105
分子名称: Nanobody Nb105, Nanobody Nb17, Spike protein S1
著者Huang, W, Taylor, D.J.
登録日2021-04-06
公開日2021-08-11
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting diverse and conserved epitopes
Nat Commun, 12, 2021
8T6O
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SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 0 bp R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Hibshman, G.N, Bravo, J.P.K, Taylor, D.W.
登録日2023-06-16
公開日2024-05-01
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9.
Nat Commun, 15, 2024
8SFJ
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WT CRISPR-Cas12a with a 10bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*AP*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cas12a domain flexibility guides R-loop formation and forces RuvC resetting.
Mol.Cell, 84, 2024
8SFL
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WT CRISPR-Cas12a with a 15bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (40-MER), RNA (34-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cas12a domain flexibility guides R-loop formation and forces RuvC resetting.
Mol.Cell, 84, 2024
8SFO
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WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (35-MER), DNA (40-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cas12a domain flexibility guides R-loop formation and forces RuvC resetting.
Mol.Cell, 84, 2024
8SFH
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WT CRISPR-Cas12a with a 5bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (32-MER), RNA (27-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
最終更新日2025-01-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cas12a domain flexibility guides R-loop formation and forces RuvC resetting.
Mol.Cell, 84, 2024
6MDR
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Cryo-EM structure of the Ceru+32/GFP-17 protomer
分子名称: Ceru+32, GFP-17
著者Simon, A.J, Zhou, Y, Ramasubramani, V, Glaser, J, Pothukuchy, A, Golihar, J, Gerberich, J.C, Leggere, J.C, Morrow, B.R, Jung, C, Glotzer, S.C, Taylor, D.W, Ellington, A.D.
登録日2018-09-05
公開日2019-01-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Supercharging enables organized assembly of synthetic biomolecules.
Nat Chem, 11, 2019
7S4V
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Cas9 bound to 12-14MM DNA, 60 min time-point, kinked conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
著者Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
登録日2021-09-09
公開日2022-03-02
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
8FD8
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human 15-PGDH with NADH bound
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)]
著者Huang, W, Taylor, D.
登録日2022-12-02
公開日2023-03-08
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8CVN
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Cryo-EM Structure of Human 15-PGDH in Complex with Small Molecule SW209415
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)], 2-[butyl(oxidanyl)-$l^{3}-sulfanyl]-4-(2,3-dimethylimidazol-4-yl)-6-(1,3-thiazol-2-yl)thieno[2,3-b]pyridin-3-amine
著者Huang, W, Taylor, D.J.
登録日2022-05-18
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8UMF
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Structure of PsCas9 in complex with gRNA and DNA in product state
分子名称: Cas9, DNA (80-MER), MAGNESIUM ION, ...
著者Bravo, J.P.K, Taylor, D.W.
登録日2023-10-17
公開日2024-10-02
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure-guided engineering of PsCas9 yields a high fidelity and activity enzyme for in vivo gene editing
To Be Published
8S9T
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CRISPR-Cas type III-D effector complex
分子名称: CRISPR RNA, Cas10, Cas7-2x, ...
著者Schwartz, E.A, Taylor, D.W.
登録日2023-03-30
公開日2024-04-24
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Nat Commun, 15, 2024
7TUH
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Crystal structure of anti-tapasin PaSta2-Fab
分子名称: PaSta2 Fab heavy chain, PaSta2 Fab kappa light chain
著者Jiang, J, Natarajan, K, Taylor, D.K, Boyd, L.F, Margulies, D.H.
登録日2022-02-02
公開日2022-09-07
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural mechanism of tapasin-mediated MHC-I peptide loading in antigen presentation.
Nat Commun, 13, 2022
6NTS
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Protein Phosphatase 2A (Aalpha-B56alpha-Calpha) holoenzyme in complex with a Small Molecule Activator of PP2A (SMAP)
分子名称: MANGANESE (II) ION, N-[(1R,2R,3S)-2-hydroxy-3-(10H-phenoxazin-10-yl)cyclohexyl]-4-(trifluoromethoxy)benzene-1-sulfonamide, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform, ...
著者Huang, W, Taylor, D.
登録日2019-01-30
公開日2020-05-06
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Selective PP2A Enhancement through Biased Heterotrimer Stabilization.
Cell, 181, 2020
8CXN
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SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-57
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, pan-sarbecovirus nanobody 2-57
著者Huang, W, Taylor, D.
登録日2022-05-22
公開日2022-07-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
8CWL
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Cryo-EM structure of Human 15-PGDH in complex with small molecule SW222746
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)], 2-methyl-6-[7-(piperidine-1-carbonyl)quinoxalin-2-yl]isoquinolin-1(2H)-one
著者Huang, W, Taylor, D.J.
登録日2022-05-19
公開日2023-03-08
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8S9U
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CRISPR-Cas type III-D effector complex bound to a target RNA
分子名称: CRISPR RNA, Cas10, Cas7-2x, ...
著者Schwartz, E.A, Taylor, D.W.
登録日2023-03-30
公開日2024-04-24
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Nat Commun, 15, 2024
8S9V
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CRISPR-Cas type III-D effector complex bound to a self-target RNA in the pre-cleavage state
分子名称: CRISPR RNA, Cas10, Cas7-2x, ...
著者Schwartz, E.A, Taylor, D.W.
登録日2023-03-30
公開日2024-04-24
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Nat Commun, 15, 2024
8TZV
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Apo form of human ATE1
分子名称: Isoform ATE1-2 of Arginyl-tRNA--protein transferase 1, ZINC ION
著者Huang, W, Zhang, Y, Taylor, D.J.
登録日2023-08-28
公開日2024-08-14
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Oligomerization and a distinct tRNA-binding loop are important regulators of human arginyl-transferase function.
Nat Commun, 15, 2024
8CY7
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SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Huang, W, Taylor, D.
登録日2022-05-23
公開日2022-07-06
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
8UAU
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human ATE1 in complex with Arg-tRNA and a peptide substrate
分子名称: Isoform ATE1-2 of Arginyl-tRNA--protein transferase 1, RNA (76-MER), ZINC ION, ...
著者Huang, W, Zhang, Y, Taylor, D.J.
登録日2023-09-22
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Oligomerization and a distinct tRNA-binding loop are important regulators of human arginyl-transferase function.
Nat Commun, 15, 2024
7TUG
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Crystal structure of Tapasin in complex with PaSta2-Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PaSta2 Fab heavy chain, PaSta2 Fab kappa light chain, ...
著者Jiang, J, Natarajan, K, Taylor, D.K, Boyd, L.F, Margulies, D.H.
登録日2022-02-02
公開日2022-09-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structural mechanism of tapasin-mediated MHC-I peptide loading in antigen presentation.
Nat Commun, 13, 2022

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