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PDB: 485 results

2KFK
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Solution structure of Bem1p PB1 domain complexed with Cdc24p PB1 domain
Descriptor: Bud emergence protein 1, Cell division control protein 24
Authors:Kobashigawa, Y, Yoshinaga, S, Tandai, T, Ogura, K, Inagaki, F.
Deposit date:2009-02-23
Release date:2009-10-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
2D5Z
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BU of 2d5z by Molmil
Crystal structure of T-state human hemoglobin complexed with three L35 molecules
Descriptor: 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, Hemoglobin alpha subunit, Hemoglobin beta subunit, ...
Authors:Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R.
Deposit date:2005-11-08
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35
J.Mol.Biol., 356, 2006
2CV3
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BU of 2cv3 by Molmil
Crystal structure of porcine pancreatic elastase complexed with a macroclyclic peptide inhibitor
Descriptor: Elastase 1, Inhibitor FR901451
Authors:Kinoshita, T, Tada, T, Kitatani, T.
Deposit date:2005-05-31
Release date:2006-05-16
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the complex of porcine pancreatic elastase with a trimacrocyclic peptide inhibitor FR901451
Acta Crystallogr.,Sect.F, 61, 2005
1DMO
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CALMODULIN, NMR, 30 STRUCTURES
Descriptor: CALMODULIN
Authors:Zhang, M, Tanaka, T, Ikura, M.
Deposit date:1996-04-24
Release date:1996-08-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Calcium-induced conformational transition revealed by the solution structure of apo calmodulin.
Nat.Struct.Biol., 2, 1995
1ITX
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BU of 1itx by Molmil
Catalytic Domain of Chitinase A1 from Bacillus circulans WL-12
Descriptor: GLYCEROL, Glycosyl Hydrolase
Authors:Iwahori, F, Matsumoto, T, Watanabe, T, Nonaka, T.
Deposit date:2002-02-13
Release date:2002-03-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution
PROC.JPN.ACAD.,SER.B, 75, 1999
3VOR
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BU of 3vor by Molmil
Crystal Structure Analysis of the CofA
Descriptor: CFA/III pilin
Authors:Fukakusa, S, Kawahara, K, Nakamura, S, Iwasita, T, Baba, S, Nishimura, M, Kobayashi, Y, Honda, T, Iida, T, Taniguchi, T, Ohkubo, T.
Deposit date:2012-02-06
Release date:2012-09-26
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Structure of the CFA/III major pilin subunit CofA from human enterotoxigenic Escherichia coli determined at 0.90 A resolution by sulfur-SAD phasing
Acta Crystallogr.,Sect.D, 68, 2012
2ZC4
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Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae
Descriptor: (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 2X, SULFATE ION
Authors:Yamada, M, Watanabe, T, Takeuchi, Y.
Deposit date:2007-11-02
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae
Antimicrob.Agents Chemother., 52, 2008
2BVB
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The C-terminal domain from Micronemal Protein 1 (MIC1) from Toxoplasma Gondii
Descriptor: MICRONEMAL PROTEIN 1
Authors:Saouros, S, Edwards-Jones, B, Reiss, M, Sawmynaden, K, Cota, E, Simpson, P, Dowse, T.J, Jakle, U, Ramboarina, S, Shivarattan, T, Matthews, S, Soldati-Favre, D.
Deposit date:2005-06-23
Release date:2005-10-12
Last modified:2021-06-23
Method:SOLUTION NMR
Cite:A Novel Galectin-Like Domain from Toxoplasma Gondll Micronemal Protein 1 Assists the Folding, Assembly,and Transport of a Cell-Adhesion Complex.
J.Biol.Chem., 280, 2005
2ZC6
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Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae
Descriptor: (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 1A, ZINC ION
Authors:Yamada, M, Watanabe, T, Takeuchi, Y.
Deposit date:2007-11-02
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae
Antimicrob.Agents Chemother., 52, 2008
2ZC5
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Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (biapenem) from Streptococcus pneumoniae
Descriptor: (4R,5S)-3-(6,7-dihydro-5H-pyrazolo[1,2-a][1,2,4]triazol-4-ium-6-ylsulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-meth yl-4,5-dihydro-1H-pyrrole-2-carboxylate, Penicillin-binding protein 1A, ZINC ION
Authors:Yamada, M, Watanabe, T, Takeuchi, Y.
Deposit date:2007-11-02
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae
Antimicrob.Agents Chemother., 52, 2008
2ZC3
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Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (biapenem) from Streptococcus pneumoniae
Descriptor: (4R,5S)-3-(6,7-dihydro-5H-pyrazolo[1,2-a][1,2,4]triazol-4-ium-6-ylsulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-meth yl-4,5-dihydro-1H-pyrrole-2-carboxylate, Penicillin-binding protein 2X, SULFATE ION
Authors:Yamada, M, Watanabe, T, Takeuchi, Y.
Deposit date:2007-11-02
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae
Antimicrob.Agents Chemother., 52, 2008
2D60
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BU of 2d60 by Molmil
Crystal structure of deoxy human hemoglobin complexed with two L35 molecules
Descriptor: 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, Hemoglobin alpha subunit, Hemoglobin beta subunit, ...
Authors:Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R.
Deposit date:2005-11-08
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35
J.Mol.Biol., 356, 2006
2D5X
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Crystal structure of carbonmonoxy horse hemoglobin complexed with L35
Descriptor: 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, CARBON MONOXIDE, Hemoglobin alpha subunit, ...
Authors:Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R.
Deposit date:2005-11-08
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35
J.Mol.Biol., 356, 2006
1ED7
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BU of 1ed7 by Molmil
SOLUTION STRUCTURE OF THE CHITIN-BINDING DOMAIN OF BACILLUS CIRCULANS WL-12 CHITINASE A1
Descriptor: CHITINASE A1
Authors:Ikegami, T, Okada, T, Hashimoto, M, Seino, S, Watanabe, T, Shirakawa, M.
Deposit date:2000-01-27
Release date:2000-05-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the chitin-binding domain of Bacillus circulans WL-12 chitinase A1.
J.Biol.Chem., 275, 2000
3W4K
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BU of 3w4k by Molmil
Crystal Structure of human DAAO in complex with coumpound 13
Descriptor: 3-hydroxy-6-(2-phenylethyl)pyridazin-4(1H)-one, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hondo, T, Warizaya, M, Niimi, T, Namatame, I, Yamaguchi, T, Nakanishi, K, Hamajima, T, Harada, K, Sakashita, H, Matsumoto, Y, Orita, M, Watanabe, T, Takeuchi, M.
Deposit date:2013-01-09
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:4-Hydroxypyridazin-3(2H)-one Derivatives as Novel d-Amino Acid Oxidase Inhibitors.
J.Med.Chem., 56, 2013
3W4J
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Crystal Structure of human DAAO in complex with coumpound 12
Descriptor: 3-hydroxy-5-(2-phenylethyl)pyridin-2(1H)-one, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hondo, T, Warizaya, M, Niimi, T, Namatame, I, Yamaguchi, T, Nakanishi, K, Hamajima, T, Harada, K, Sakashita, H, Matsumoto, Y, Orita, M, Watanabe, T, Takeuchi, M.
Deposit date:2013-01-09
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:4-Hydroxypyridazin-3(2H)-one Derivatives as Novel d-Amino Acid Oxidase Inhibitors.
J.Med.Chem., 56, 2013
3W4I
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Crystal Structure of human DAAO in complex with coumpound 8
Descriptor: D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, pyridine-2,3-diol
Authors:Hondo, T, Warizaya, M, Niimi, T, Namatame, I, Yamaguchi, T, Nakanishi, K, Hamajima, T, Harada, K, Sakashita, H, Matsumoto, Y, Orita, M, Watanabe, T, Takeuchi, M.
Deposit date:2013-01-09
Release date:2013-05-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:4-Hydroxypyridazin-3(2H)-one Derivatives as Novel d-Amino Acid Oxidase Inhibitors.
J.Med.Chem., 56, 2013
2ZZA
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BU of 2zza by Molmil
Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hata, K, Tanaka, T, Murakami, C, Ohmae, E, Gekko, K, Shiro, Y, Akasaka, K.
Deposit date:2009-02-06
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
To be Published
3A5T
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BU of 3a5t by Molmil
Crystal structure of MafG-DNA complex
Descriptor: 5'-D(*CP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*G)-3', MAGNESIUM ION, ...
Authors:Kurokawa, H, Motohashi, H, Sueno, S, Kimura, M, Takagawa, H, Kanno, Y, Yamamoto, M, Tanaka, T.
Deposit date:2009-08-11
Release date:2009-10-13
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis of Alternative DNA Recognition by Maf Transcription Factors
Mol.Cell.Biol., 29, 2009
6LPK
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A2AR crystallized in EROCOC17+4, LCP-SFX at 293 K
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
Deposit date:2020-01-10
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
2OJ2
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BU of 2oj2 by Molmil
NMR Structure Analysis of the Hematopoetic Cell Kinase SH3 Domain complexed with an artificial high affinity ligand (PD1)
Descriptor: Hematopoetic Cell Kinase, SH3 domain, artificial peptide PD1
Authors:Schmidt, H, Hoffmann, S, Tran, T, Stoldt, M, Stangler, T, Wiesehan, K, Willbold, D.
Deposit date:2007-01-12
Release date:2007-01-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of a Hck SH3 Domain Ligand Complex Reveals Novel Interaction Modes
J.Mol.Biol., 365, 2007
6LPL
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BU of 6lpl by Molmil
A2AR crystallized in EROCOC17+4, SS-ROX at 100 K
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
Deposit date:2020-01-11
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
6LPJ
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A2AR crystallized in EROCOC17+4, LCP-SFX at 277 K
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
Deposit date:2020-01-10
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
1F2E
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BU of 1f2e by Molmil
STRUCTURE OF SPHINGOMONAD, GLUTATHIONE S-TRANSFERASE COMPLEXED WITH GLUTATHIONE
Descriptor: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
Authors:Nishio, T, Watanabe, T, Patel, A, Wang, Y, Lau, P.C.K, Grochulski, P, Li, Y, Cygler, M.
Deposit date:2000-05-24
Release date:2000-06-21
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Properties of a Sphingomonad and Marine Bacterium Beta-Class Glutathione S-Transferases and Crystal Structure of the Former Complex with Glutathione
To be published
7K3U
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BU of 7k3u by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant R293S
Descriptor: Aminopeptidase P family protein, GLYCEROL, MANGANESE (II) ION
Authors:Xu, S, Grochulski, P, Tanaka, T.
Deposit date:2020-09-13
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017

222036

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