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PDB: 426 results

6M7L
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BU of 6m7l by Molmil
Complex of OxyA with the X-domain from GPA biosynthesis
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 hydroxylase, Putative non-ribosomal peptide synthetase
Authors:Greule, A, Izore, T, Tailhades, J, Peschke, M, Schoppet, M, Ahmed, I, Kulik, A, Adamek, M, Ziemert, N, De Voss, J, Stegmann, E, Cryle, M.J.
Deposit date:2018-08-20
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.648297 Å)
Cite:Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics.
Nat Commun, 10, 2019
6DYS
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BU of 6dys by Molmil
C-terminal condensation domain of Ebony in complex with beta-alanyl-dopamine
Descriptor: CALCIUM ION, Ebony, N-[2-(3,4-dihydroxyphenyl)ethyl]-beta-alaninamide
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6DYN
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BU of 6dyn by Molmil
C-terminal condensation domain of Ebony in complex with Histamine
Descriptor: CALCIUM ION, Ebony, HISTAMINE
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6DYO
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BU of 6dyo by Molmil
C-terminal condensation domain of Ebony in complex with L-Dopamine
Descriptor: CALCIUM ION, Ebony, L-DOPAMINE
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6DYM
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BU of 6dym by Molmil
C-terminal condensation domain of Ebony
Descriptor: CALCIUM ION, Ebony
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6DYR
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BU of 6dyr by Molmil
C-terminal condensation domain of Ebony in complex with Carcinine
Descriptor: Ebony, N-[2-(1H-imidazol-5-yl)ethyl]-beta-alaninamide
Authors:Izore, T, Tailhades, J, Hansen, M.H, Kaczmarski, J.A, Jackson, C.J, Cryle, M.J.
Deposit date:2018-07-02
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Drosophila melanogasternonribosomal peptide synthetase Ebony encodes an atypical condensation domain.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1N18
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BU of 1n18 by Molmil
Thermostable mutant of Human Superoxide Dismutase, C6A, C111S
Descriptor: COPPER (I) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Cardoso, R.M.F, Thayer, M.M, DiDonato, M, Lo, T.P, Bruns, C.K, Getzoff, E.D, Tainer, J.A.
Deposit date:2002-10-16
Release date:2002-11-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase.
J.Mol.Biol., 324, 2002
1N0N
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BU of 1n0n by Molmil
Catalytic and Structural Effects of Amino-Acid Substitution at His30 in Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, SULFATE ION, Superoxide dismutase [Mn]
Authors:Borgstahl, G.E.O, Parge, H.E, Hickey, M.J, Beyer Jr, W.F, Hallewell, R.A, Tainer, J.A.
Deposit date:2002-10-14
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Catalytic and Structural Effects of Amino-Acid Substitution at His30 in Human Manganese Superoxide Dismutase
to be published
1N19
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BU of 1n19 by Molmil
Structure of the HSOD A4V mutant
Descriptor: COPPER (I) ION, SULFATE ION, Superoxide Dismutase [Cu-Zn], ...
Authors:Cardoso, R.M.F, Thayer, M.M, DiDonato, M, Lo, T.P, Bruns, C.K, Getzoff, E.D, Tainer, J.A.
Deposit date:2002-10-16
Release date:2002-11-27
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase.
J.Mol.Biol., 324, 2002
1MUY
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BU of 1muy by Molmil
CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI
Descriptor: ADENINE GLYCOSYLASE, GLYCEROL, IMIDAZOLE, ...
Authors:Guan, Y, Tainer, J.A.
Deposit date:1998-08-20
Release date:1999-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily.
Nat.Struct.Biol., 5, 1998
1MUD
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BU of 1mud by Molmil
CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI, D138N MUTANT COMPLEXED TO ADENINE
Descriptor: ADENINE, Adenine DNA glycosylase, GLYCEROL, ...
Authors:Guan, Y, Tainer, J.A.
Deposit date:1998-08-20
Release date:1999-09-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily.
Nat.Struct.Biol., 5, 1998
1N0J
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BU of 1n0j by Molmil
The Structure of Human Mitochondrial MN3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Borgstahl, G.E.O, Parge, H.E, Tainer, J.A.
Deposit date:2002-10-14
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of Human Mitochondrial Mn3+ Superoxide Dismutase Reveals a Novel Tetrameric Interface of Two 4-Helix Bundles
Cell(Cambridge,Mass.), 71, 1992
2K9N
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BU of 2k9n by Molmil
Solution NMR structure of the R2R3 DNA binding domain of Myb1 protein from protozoan parasite Trichomonas vaginalis
Descriptor: MYB24
Authors:Lou, Y, Wei, S, Rajasekaran, M, Chou, C, Hsu, H, Tai, J, Chen, C.
Deposit date:2008-10-19
Release date:2009-03-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structural analysis of DNA recognition by a novel Myb1 DNA-binding domain in the protozoan parasite Trichomonas vaginalis.
Nucleic Acids Res., 37, 2009
2H3I
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BU of 2h3i by Molmil
Solution structure of the HIV-1 myristoylated Matrix protein
Descriptor: Gag polyprotein, MYRISTIC ACID
Authors:Saad, J.S, Miller, J, Tai, J, Kim, A, Ghanam, R.H, Summers, M.F.
Deposit date:2006-05-22
Release date:2006-07-25
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2H3F
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BU of 2h3f by Molmil
Solution structure of the HIV-1 MA protein
Descriptor: Gag polyprotein
Authors:Saad, J.S, Miller, J, Tai, J, Kim, A, Ghanam, R.H, Summers, M.F.
Deposit date:2006-05-22
Release date:2006-07-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2H3Z
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BU of 2h3z by Molmil
Structure of the HIV-1 matrix protein bound to di-C4-phosphatidylinositol-(4,5)-bisphosphate
Descriptor: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, Gag polyprotein
Authors:Saad, J.S, Miller, J, Tai, J, Kim, A, Ghanam, R.H, Summers, M.F.
Deposit date:2006-05-23
Release date:2006-07-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2H3V
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BU of 2h3v by Molmil
Structure of the HIV-1 Matrix protein bound to di-C8-phosphatidylinositol-(4,5)-bisphosphate
Descriptor: Gag polyprotein, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Saad, J.S, Miller, J, Tai, J, Kim, A, Ghanam, R.H, Summers, M.F.
Deposit date:2006-05-23
Release date:2006-07-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis for targeting HIV-1 Gag proteins to the plasma membrane for virus assembly.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2JMG
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BU of 2jmg by Molmil
Solution structure of V7R mutant of HIV-1 myristoylated matrix protein
Descriptor: Gag polyprotein, MYRISTIC ACID
Authors:Saad, J.S, Loeliger, E, Luncsford, P, Liriano, M, Tai, J, Kim, A, Miller, J, Joshi, A, Freed, E.O, Summers, M.F.
Deposit date:2006-11-11
Release date:2007-02-06
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Point mutations in the HIV-1 matrix protein turn off the myristyl switch.
J.Mol.Biol., 366, 2007
2KDZ
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BU of 2kdz by Molmil
Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA
Descriptor: 5'-D(*AP*AP*GP*AP*TP*AP*AP*CP*GP*AP*TP*AP*TP*TP*TP*A)-3', 5'-D(*TP*AP*AP*AP*TP*AP*TP*CP*GP*TP*TP*AP*TP*CP*TP*T)-3', MYB24
Authors:Lou, Y.C, Wei, S.Y, Rajasekaran, M, Chou, C.C, Hsu, H.M, Tai, J.H, Chen, C.
Deposit date:2009-01-21
Release date:2009-03-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structural analysis of DNA recognition by a novel Myb1 DNA-binding domain in the protozoan parasite Trichomonas vaginalis.
Nucleic Acids Res., 2009
7Z3C
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BU of 7z3c by Molmil
A novel molecular switch controls assembly of bacterial focal adhesions in response to changes in surface structure.
Descriptor: Adventurous gliding motility protein GltJ
Authors:Attia, B, My, L, Castaing, J.P, Le Guenno, H, Espinosa, L, Schmidt, V, Nouailler, M, Bornet, O, Elantak, L, Mignot, T.
Deposit date:2022-03-02
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A novel molecular switch controls assembly of bacterial focal adhesions
To Be Published
7Z5I
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BU of 7z5i by Molmil
Transcription factor MYF5 bound to symmetrical site
Descriptor: DNA (5'-D(P*AP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*T)-3'), Myogenic factor 5
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2022-03-09
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Transcription factor MYF5 bound to symmetrical site
To Be Published
7Z5K
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BU of 7z5k by Molmil
Transcription factor MYF5 bound to non-symmetrical site
Descriptor: DNA (5'-D(P*AP*CP*GP*CP*GP*TP*CP*AP*GP*CP*TP*GP*TP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*AP*AP*CP*AP*GP*CP*TP*GP*AP*CP*GP*CP*GP*T)-3'), Myogenic factor 5
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2022-03-09
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Transcription factor MYF5 bound to non-symmetrical site
To Be Published
8TLY
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BU of 8tly by Molmil
Human ASCC1 Phosphodiesterase/Ligase Domain
Descriptor: Activating signal cointegrator 1 complex subunit 1
Authors:Tsutakawa, S.E, Tainer, J.A, Arvai, A.S, Thapar, R.
Deposit date:2023-07-27
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:ASCC1 structures and bioinformatics reveal a novel helix-clasp-helix RNA-binding motif linked to a two-histidine phosphodiesterase.
J.Biol.Chem., 300, 2024
8TUK
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BU of 8tuk by Molmil
Alvinella ASCC1 KH and Phosphodiesterase/Ligase Domain
Descriptor: 1,2-ETHANEDIOL, Activating signal cointegrator 1 complex subunit 1, IMIDAZOLE
Authors:Tsutakawa, S.E, Tainer, J.A, Arvai, A.S, Chinnam, N.B.
Deposit date:2023-08-16
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:ASCC1 structures and bioinformatics reveal a novel helix-clasp-helix RNA-binding motif linked to a two-histidine phosphodiesterase.
J.Biol.Chem., 300, 2024
6VBA
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BU of 6vba by Molmil
Structure of human Uracil DNA Glycosylase (UDG) bound to Aurintricarboxylic acid (ATA)
Descriptor: 3,3'-[(3-carboxy-4-oxocyclohexa-2,5-dien-1-ylidene)methylene]bis(6-hydroxybenzoic acid), Uracil-DNA glycosylase
Authors:Moiani, D, Arvai, A.S, Tainer, J.A.
Deposit date:2019-12-18
Release date:2021-03-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An effective human uracil-DNA glycosylase inhibitor targets the open pre-catalytic active site conformation.
Prog.Biophys.Mol.Biol., 163, 2021

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PDB entries from 2024-07-17

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