Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1345 results

1JJ2
DownloadVisualize
BU of 1jj2 by Molmil
Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Klein, D.J, Schmeing, T.M, Moore, P.B, Steitz, T.A.
Deposit date:2001-07-03
Release date:2001-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The kink-turn: a new RNA secondary structure motif.
EMBO J., 20, 2001
7PMT
DownloadVisualize
BU of 7pmt by Molmil
Human Cyclophilin D in complex with N-[(5-ethyl-4-oxo-1,2,3,4,5,6- hexahydro-1,5-benzodiazocin-8-yl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
Descriptor: DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ...
Authors:Silva, D.O, Graedler, U, Bandeiras, T.M.
Deposit date:2021-09-02
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Human Cyclophilin D in complex with N-[(4-aminophenyl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
To Be Published
1KF6
DownloadVisualize
BU of 1kf6 by Molmil
E. coli Quinol-Fumarate Reductase with Bound Inhibitor HQNO
Descriptor: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, ACETATE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Iverson, T.M, Luna-Chavez, C, Croal, L.R, Cecchini, G, Rees, D.C.
Deposit date:2001-11-19
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic studies of the Escherichia coli quinol-fumarate reductase with inhibitors bound to the quinol-binding site.
J.Biol.Chem., 277, 2002
7Q5C
DownloadVisualize
BU of 7q5c by Molmil
Crystal structure of OmpG in space group 96
Descriptor: Outer membrane porin G, SODIUM ION, TETRAETHYLENE GLYCOL, ...
Authors:Nguyen, T.T.M, Khan, A.R, Barringer, R, McManus, J.J, Race, P.R.
Deposit date:2021-11-03
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.717 Å)
Cite:Experimental phase diagrams to optimise OmpG
To Be Published
1KVI
DownloadVisualize
BU of 1kvi by Molmil
Solution Structure of the Reduced Form of the First Heavy Metal Binding Motif of the Menkes Protein
Descriptor: Copper-transporting ATPase 1
Authors:De Silva, T.M, Veglia, G, Opella, S.J.
Deposit date:2002-01-26
Release date:2003-11-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the reduced and Cu(I) bound forms of the first metal binding sequence of ATP7A associated with Menkes disease.
Proteins, 61, 2005
1KVJ
DownloadVisualize
BU of 1kvj by Molmil
Solution Structure of the Cu(I) bound form of the first heavy metal binding motif of the Menkes protein
Descriptor: COPPER (I) ION, Copper-transporting ATPase 1
Authors:De Silva, T.M, Veglia, G, Opella, S.J.
Deposit date:2002-01-26
Release date:2003-11-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the reduced and Cu(I) bound forms of the first metal binding sequence of ATP7A associated with Menkes disease.
Proteins, 61, 2005
1L16
DownloadVisualize
BU of 1l16 by Molmil
STRUCTURAL ANALYSIS OF THE TEMPERATURE-SENSITIVE MUTANT OF BACTERIOPHAGE T4 LYSOZYME, GLYCINE 156 (RIGHT ARROW) ASPARTIC ACID
Descriptor: T4 LYSOZYME
Authors:Gray, T.M, Matthews, B.W.
Deposit date:1988-02-05
Release date:1988-04-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the temperature-sensitive mutant of bacteriophage T4 lysozyme, glycine 156----aspartic acid.
J.Biol.Chem., 262, 1987
1KFY
DownloadVisualize
BU of 1kfy by Molmil
QUINOL-FUMARATE REDUCTASE WITH QUINOL INHIBITOR 2-[1-(4-CHLORO-PHENYL)-ETHYL]-4,6-DINITRO-PHENOL
Descriptor: 2-[1-(4-CHLORO-PHENYL)-ETHYL]-4,6-DINITRO-PHENOL, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Iverson, T.M, Luna-Chavez, C, Croal, L.R, Cecchini, G, Rees, D.C.
Deposit date:2001-11-24
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystallographic studies of the Escherichia coli quinol-fumarate reductase with inhibitors bound to the quinol-binding site.
J.Biol.Chem., 277, 2002
1LUP
DownloadVisualize
BU of 1lup by Molmil
Solution structure of a toxin (GsMTx2) from the tarantula, Grammostola spatulata, which inhibits mechanosensitive ion channels
Descriptor: GsMTx2
Authors:Oswald, R.E, Suchyna, T.M, McFeeters, R, Gottlieb, P, Sachs, F.
Deposit date:2002-05-23
Release date:2002-08-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of peptide toxins that block mechanosensitive ion channels
J.Biol.Chem., 277, 2002
1LWI
DownloadVisualize
BU of 1lwi by Molmil
3-ALPHA-HYDROXYSTEROID/DIHYDRODIOL DEHYDROGENASE FROM RATTUS NORVEGICUS
Descriptor: 3-ALPHA-HYDROXYSTEROID/DIHYDRODIOL DEHYDROGENASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Bennett, M.J, Schlegel, B.P, Jez, J.M, Penning, T.M, Lewis, M.
Deposit date:1996-02-24
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of 3 alpha-hydroxysteroid/dihydrodiol dehydrogenase complexed with NADP+.
Biochemistry, 35, 1996
8OJR
DownloadVisualize
BU of 8ojr by Molmil
Solution NMR Structure of Alpha-Synuclein 1-25 Peptide in 50% TFE.
Descriptor: Alpha-synuclein
Authors:Allen, S.G, Williams, C, Meade, R.M, Tang, T.M.S, Crump, M.P, Mason, J.M.
Deposit date:2023-03-24
Release date:2023-08-09
Method:SOLUTION NMR
Cite:An N-terminal alpha-Synuclein fragment binds lipid vesicles to modulate lipid induced aggregation
Cell Rep Phys Sci, 2023
6HL5
DownloadVisualize
BU of 6hl5 by Molmil
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and ASPP1(932-954)
Descriptor: Apoptosis-stimulating of p53 protein 1, GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, ...
Authors:Leissing, T.M, Chowdhury, R, Clifton, I.J, Lu, X, Schofield, C.J.
Deposit date:2018-09-10
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Factor Inhibiting HIF (FIH) in complex with zinc, NOG and ASPP1(932-954)
To Be Published
5KL8
DownloadVisualize
BU of 5kl8 by Molmil
Crystal structure of the Pumilio-Nos-CyclinB RNA complex
Descriptor: Maternal protein pumilio, Protein nanos, RNA (5'-R(*UP*AP*UP*UP*UP*GP*UP*AP*AP*UP*U)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (4 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KMG
DownloadVisualize
BU of 5kmg by Molmil
Near-atomic cryo-EM structure of PRC1 bound to the microtubule
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kellogg, E.H, Howes, S, Ti, S.-C, Ramirez-Aportela, E, Kapoor, T.M, Chacon, P, Nogales, E.
Deposit date:2016-06-27
Release date:2016-08-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic cryo-EM structure of PRC1 bound to the microtubule.
Proc.Natl.Acad.Sci.USA, 113, 2016
5KL0
DownloadVisualize
BU of 5kl0 by Molmil
Crystal Structure of Phosphoglucomutase from Xanthomonas citri citri complexed with Glucose-1,6-biphosphate
Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, Phosphoglucomutase
Authors:Goto, L.S, Pereira, H.M, Novo Mansur, M.T.M.
Deposit date:2016-06-23
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Structural and functional characterization of the phosphoglucomutase from Xanthomonas citri subsp. citri.
Biochim.Biophys.Acta, 1864, 2016
5KDO
DownloadVisualize
BU of 5kdo by Molmil
Heterotrimeric complex of the 4 alanine insertion variant of the Gi alpha1 subunit and the Gbeta1-Ggamma1
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, ...
Authors:Kaya, A.I, Lokits, A.D, Gilbert, J, Iverson, T.M, Meiler, J, Hamm, H.E.
Deposit date:2016-06-08
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Conserved Hydrophobic Core in G alpha i1 Regulates G Protein Activation and Release from Activated Receptor.
J.Biol.Chem., 291, 2016
5KDL
DownloadVisualize
BU of 5kdl by Molmil
Crystal structure of the 4 alanine insertion variant of the Gi alpha1 subunit bound to GTPgammaS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, MAGNESIUM ION
Authors:Kaya, A.I, Lokits, A.D, Gilbert, J, Iverson, T.M, Meiler, J, Hamm, H.E.
Deposit date:2016-06-08
Release date:2016-08-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.665 Å)
Cite:A Conserved Hydrophobic Core in G alpha i1 Regulates G Protein Activation and Release from Activated Receptor.
J.Biol.Chem., 291, 2016
5KDK
DownloadVisualize
BU of 5kdk by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-08
Release date:2017-06-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of truncated hemolysin A from P. mirabilis at 2.0 Angstroms in high salt
To Be Published
5KLA
DownloadVisualize
BU of 5kla by Molmil
Crystal structure of the drosophila Pumilio RNA-binding domain in complex with hunchback RNA
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Maternal protein pumilio, ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
5KEH
DownloadVisualize
BU of 5keh by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-09
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5L08
DownloadVisualize
BU of 5l08 by Molmil
Cryo-EM structure of Casp-8 tDED filament
Descriptor: Caspase-8
Authors:Fu, T.M, Li, Y, Lu, A, Wu, H.
Deposit date:2016-07-26
Release date:2016-11-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.
Mol.Cell, 64, 2016
5KF3
DownloadVisualize
BU of 5kf3 by Molmil
Truncated hemolysin A from P. mirabilis Y134A at 2.2 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-11
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5KIQ
DownloadVisualize
BU of 5kiq by Molmil
SrpA with sialyl LewisX
Descriptor: ACETATE ION, CALCIUM ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Iverson, T.M.
Deposit date:2016-06-16
Release date:2017-05-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.638 Å)
Cite:Structures of the Streptococcus sanguinis SrpA Binding Region with Human Sialoglycans Suggest Features of the Physiological Ligand.
Biochemistry, 2016
5KKD
DownloadVisualize
BU of 5kkd by Molmil
Truncated hemolysin A Y134A from P. mirabilis at 2.1 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin, SULFATE ION
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-21
Release date:2017-03-22
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6I6X
DownloadVisualize
BU of 6i6x by Molmil
New Irreversible a-l-Iduronidase Inhibitors and Activity-Based Probes
Descriptor: (1~{R},2~{R},3~{R},4~{S},5~{S},6~{R})-7-methyl-3,4,5-tris(oxidanyl)-7-azabicyclo[4.1.0]heptane-2-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gloster, T.M, McMahon, S.A, Oehler, V.
Deposit date:2018-11-15
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:New Irreversible alpha-l-Iduronidase Inhibitors and Activity-Based Probes.
Chemistry, 24, 2018

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon