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PDB: 246 results

2VN0
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BU of 2vn0 by Molmil
CYP2C8DH COMPLEXED WITH TROGLITAZONE
Descriptor: (5R)-5-(4-{[(2R)-6-HYDROXY-2,5,7,8-TETRAMETHYL-3,4-DIHYDRO-2H-CHROMEN-2-YL]METHOXY}BENZYL)-1,3-THIAZOLIDINE-2,4-DIONE, CYTOCHROME P450 2C8, PALMITIC ACID, ...
Authors:Schoch, G.A, Yano, J.K, Sansen, S, Stout, C.D, Johnson, E.F.
Deposit date:2008-01-30
Release date:2008-04-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Determinants of cytochrome P450 2C8 substrate binding: structures of complexes with montelukast, troglitazone, felodipine, and 9-cis-retinoic acid.
J. Biol. Chem., 283, 2008
7FDR
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7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII, NA DITHIONITE REDUCED, PH 8.5, 1.4A RESOLUTION, 100 K
Descriptor: FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, PROTEIN (7-FE FERREDOXIN I)
Authors:Schipke, C.G, Goodin, D.B, Mcree, D.E, Stout, C.D.
Deposit date:1998-12-11
Release date:1998-12-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Oxidized and reduced Azotobacter vinelandii ferredoxin I at 1.4 A resolution: conformational change of surface residues without significant change in the [3Fe-4S]+/0 cluster.
Biochemistry, 38, 1999
3QJV
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The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
3QJR
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BU of 3qjr by Molmil
The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
3QJS
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BU of 3qjs by Molmil
The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
3QJQ
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BU of 3qjq by Molmil
The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
3QJU
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BU of 3qju by Molmil
The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
3QJT
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BU of 3qjt by Molmil
The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus
Descriptor: CARBON MONOXIDE, COPPER (I) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Liu, B, Zhang, Y, Sage, J.T, Doukov, T, Chen, Y, Stout, C.D, Fee, J.A.
Deposit date:2011-01-30
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B).
Biochim.Biophys.Acta, 1817, 2012
5EM4
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BU of 5em4 by Molmil
Structure of CYP2B4 F244W in a ligand free conformation
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2015-11-05
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations.
Biochemistry, 55, 2016
1A6L
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BU of 1a6l by Molmil
T14C MUTANT OF AZOTOBACTER VINELANDII FDI
Descriptor: FE3-S4 CLUSTER, FERREDOXIN, IRON/SULFUR CLUSTER
Authors:Gao-Sheridan, H.S, Kemper, M.A, Khayat, R, Armstrong, F.A, Prasad, G.S, Sridhar, V, Stout, C.D, Burgess, B.K.
Deposit date:1998-02-26
Release date:1998-05-27
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A T14C variant of Azotobacter vinelandii ferredoxin I undergoes facile [3Fe-4S]0 to [4Fe-4S]2+ conversion in vitro but not in vivo.
J.Biol.Chem., 273, 1998
1D3W
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BU of 1d3w by Molmil
Crystal structure of ferredoxin 1 d15e mutant from azotobacter vinelandii at 1.7 angstrom resolution.
Descriptor: FE3-S4 CLUSTER, FERREDOXIN 1, IRON/SULFUR CLUSTER
Authors:Chen, K, Hirst, J, Camba, R, Bonagura, C.A, Stout, C.D, Burges, B.K, Armstrong, F.A.
Deposit date:1999-10-01
Release date:1999-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Atomically defined mechanism for proton transfer to a buried redox centre in a protein.
Nature, 405, 2000
4N4Y
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BU of 4n4y by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, ...
Authors:Li, Y, Chen, Y, Stout, C.D.
Deposit date:2013-10-08
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus
To be Published
4O9U
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BU of 4o9u by Molmil
Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Descriptor: NAD(P) transhydrogenase subunit alpha 2, NAD(P) transhydrogenase subunit beta, NAD/NADP transhydrogenase alpha subunit 1, ...
Authors:Leung, J.H, Yamaguchi, M, Moeller, A, Schurig-Briccio, L.A, Gennis, R.B, Potter, C.S, Carragher, B, Stout, C.D.
Deposit date:2014-01-02
Release date:2015-01-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (6.926 Å)
Cite:Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.
Science, 347, 2015
4O9P
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BU of 4o9p by Molmil
Crystal structure of Thermus thermophilis transhydrogeanse domain II dimer SeMet derivative
Descriptor: NAD(P) transhydrogenase subunit alpha 2, NAD(P) transhydrogenase subunit beta
Authors:Leung, J.H, Yamaguchi, M, Moeller, A, Schurig-Briccio, L.A, Gennis, R.B, Potter, C.S, Carragher, B, Stout, C.D.
Deposit date:2014-01-02
Release date:2014-06-11
Last modified:2015-01-28
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.
Science, 347, 2015
4O93
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BU of 4o93 by Molmil
Crystal structure of Thermus thermophilis transhydrogeanse domain II dimer
Descriptor: MERCURY (II) ION, NAD(P) transhydrogenase subunit alpha 2, NAD(P) transhydrogenase subunit beta
Authors:Leung, J.H, Yamaguchi, M, Moeller, A, Schurig-Briccio, L.A, Gennis, R.B, Potter, C.S, Carragher, B, Stout, C.D.
Deposit date:2013-12-31
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.
Science, 347, 2015
4O9T
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BU of 4o9t by Molmil
Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Descriptor: NAD(P) transhydrogenase subunit alpha 2, NAD(P) transhydrogenase subunit beta
Authors:Leung, J.H, Yamaguchi, M, Moeller, A, Schurig-Briccio, L.A, Gennis, R.B, Potter, C.S, Carragher, B, Stout, C.D.
Deposit date:2014-01-02
Release date:2014-06-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.079 Å)
Cite:Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer.
Science, 347, 2015
4RUI
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BU of 4rui by Molmil
Crystal structure of a cytochrome P450 2A6 in complex with a monoterpene - sabinene.
Descriptor: Cytochrome P450 2A6, PROTOPORPHYRIN IX CONTAINING FE, Sabinene
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2014-11-19
Release date:2015-01-28
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural and Biophysical Characterization of Human Cytochromes P450 2B6 and 2A6 Bound to Volatile Hydrocarbons: Analysis and Comparison.
Mol.Pharmacol., 87, 2015
3TMZ
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BU of 3tmz by Molmil
Crystal Structure of P450 2B4(H226Y) in complex with Amlodipine
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Amlodipine, Cytochrome P450 2B4, ...
Authors:Shah, M.B, Pascual, J, Stout, C.D, Halpert, J.R.
Deposit date:2011-09-01
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Conformational Adaptation of Human Cytochrome P450 2B6 and Rabbit Cytochrome P450 2B4 Revealed upon Binding Multiple Amlodipine Molecules.
Biochemistry, 51, 2012
3UA5
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BU of 3ua5 by Molmil
Crystal Structure of P450 2B6 (Y226H/K262R) in complex with two molecules of Amlodipine
Descriptor: Amlodipine, Cytochrome P450 2B6, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2011-10-21
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational Adaptation of Human Cytochrome P450 2B6 and Rabbit Cytochrome P450 2B4 Revealed upon Binding Multiple Amlodipine Molecules.
Biochemistry, 51, 2012
4HYX
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BU of 4hyx by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle
Descriptor: Bacteriorhodopsin, DECANE, GLYCEROL, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-14
Release date:2013-03-20
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HWL
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BU of 4hwl by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-7 DMPC Bicelle
Descriptor: Bacteriorhodopsin, GLYCEROL, HEPTANE, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-08
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
4I91
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BU of 4i91 by Molmil
Crystal Structure of Cytochrome P450 2B6 (Y226H/K262R) in complex with alpha-Pinene.
Descriptor: (+)-alpha-Pinene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2012-12-04
Release date:2013-07-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Thermodynamic Basis of (+)-alpha-Pinene Binding to Human Cytochrome P450 2B6.
J.Am.Chem.Soc., 135, 2013
4J1T
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BU of 4j1t by Molmil
Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit in P2(1)
Descriptor: GLYCEROL, NAD(P) transhydrogenase subunit beta, NAD/NADP transhydrogenase alpha subunit 1, ...
Authors:Yamaguchi, M, Leung, J, Schurig Briccio, L.A, Gennis, R.B, Stout, C.D.
Deposit date:2013-02-02
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains
To be Published
4J16
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BU of 4j16 by Molmil
Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit
Descriptor: CHLORIDE ION, GLYCEROL, NAD(P) transhydrogenase subunit beta, ...
Authors:Yamaguchi, M, Leung, J, Schurig Briccio, L.A, Gennis, R.B, Stout, C.D.
Deposit date:2013-02-01
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains
To be Published
4JLT
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BU of 4jlt by Molmil
Crystal structure of P450 2B4(H226Y) in complex with paroxetine
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, GLYCEROL, ...
Authors:Shah, M.B, Pascual, J, Stout, C.D, Halpert, J.R.
Deposit date:2013-03-13
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A Structural Snapshot of CYP2B4 in Complex with Paroxetine Provides Insights into Ligand Binding and Clusters of Conformational States.
J.Pharmacol.Exp.Ther., 346, 2013

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