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PDB: 283 results

4QJD
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Crystal Structure of Twister with the Nucleotide 5'- to the Cleavage Site Disordered at 3.1 A Resolution
Descriptor: MAGNESIUM ION, Twister RNA sequence
Authors:Eiler, D.R, Wang, J, Steitz, T.A.
Deposit date:2014-06-03
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
4JKR
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Crystal Structure of E. coli RNA Polymerase in complex with ppGpp
Descriptor: DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA', DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Zuo, Y, Wang, Y, Steitz, T.A.
Deposit date:2013-03-11
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:The mechanism of E. coli RNA polymerase regulation by ppGpp is suggested by the structure of their complex.
Mol.Cell, 50, 2013
3HL2
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BU of 3hl2 by Molmil
The crystal structure of the human SepSecS-tRNASec complex
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Monothiophosphate, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Palioura, S, Steitz, T.A, Soll, D, Simonovic, M.
Deposit date:2009-05-26
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
Science, 325, 2009
3I55
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Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
2HPM
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BU of 2hpm by Molmil
Eubacterial and Eukaryotic Replicative DNA Polymerases are not Homologous: X-ray Structure of DNA Polymerase III
Descriptor: CHLORIDE ION, DNA Polymerase III alpha subunit, MAGNESIUM ION, ...
Authors:Bailey, S, Wing, R.A, Steitz, T.A.
Deposit date:2006-07-17
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The Structure of T. aquaticus DNA Polymerase III Is Distinct from Eukaryotic Replicative DNA Polymerases.
Cell(Cambridge,Mass.), 126, 2006
354D
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BU of 354d by Molmil
Structure of loop E FROM E. coli 5S RRNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*G)-3'), RNA-DNA (5'-R(*GP*CP*GP*AP*GP*AP*GP*UP*AP*)-D(*DGP(S)*)-R(*GP*C)-3')
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-10-01
Release date:1997-11-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
357D
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BU of 357d by Molmil
3.5 A structure of fragment I from E. coli 5S RRNA
Descriptor: MAGNESIUM ION, MERCURY (II) ION, RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP* GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), ...
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-10-09
Release date:1997-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
1C04
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BU of 1c04 by Molmil
IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
Descriptor: 23S RRNA FRAGMENT, RIBOSOMAL PROTEIN L11, RIBOSOMAL PROTEIN L14, ...
Authors:Ban, N, Nissen, P, Capel, M, Moore, P.B, Steitz, T.A.
Deposit date:1999-07-14
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (5 Å)
Cite:Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
Nature, 400, 1999
1FFK
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BU of 1ffk by Molmil
CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Ban, N, Nissen, P, Hansen, J, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-25
Release date:2000-08-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
Science, 289, 2000
3CFO
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BU of 3cfo by Molmil
Triple Mutant APO structure
Descriptor: DNA polymerase, GUANOSINE, SULFATE ION
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
4Z8C
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BU of 4z8c by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Roy, R.N, Lomakin, I.B, Gagnon, M.G, Steitz, T.A.
Deposit date:2015-04-08
Release date:2015-05-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The mechanism of inhibition of protein synthesis by the proline-rich peptide oncocin.
Nat.Struct.Mol.Biol., 22, 2015
4Y4O
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Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
4Y4P
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BU of 4y4p by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A.
Deposit date:2015-02-10
Release date:2015-03-18
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Nat.Struct.Mol.Biol., 22, 2015
3J4J
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BU of 3j4j by Molmil
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
Descriptor: Translation initiation factor IF-2
Authors:Simonetti, A, Marzi, S, Billas, I.M.L, Tsai, A, Fabbretti, A, Myasnikov, A, Roblin, P, Vaiana, A.C, Hazemann, I, Eiler, D, Steitz, T.A, Puglisi, J.D, Gualerzi, C.O, Klaholz, B.P.
Deposit date:2013-08-26
Release date:2013-09-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor.
Proc.Natl.Acad.Sci.USA, 110, 2013
2EFG
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BU of 2efg by Molmil
TRANSLATIONAL ELONGATION FACTOR G COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PROTEIN (ELONGATION FACTOR G DOMAIN 3), PROTEIN (ELONGATION FACTOR G)
Authors:Czworkowski, J, Wang, J, Steitz, T.A, Moore, P.B.
Deposit date:1998-09-23
Release date:1999-09-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of elongation factor G complexed with GDP, at 2.7 A resolution.
EMBO J., 13, 1994
4Z3S
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BU of 4z3s by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 3'-deoxy-3'-{[(2E)-3-(4-{[(4Z)-6-O-(6-deoxy-3,4-di-O-methyl-alpha-D-mannopyranosyl)-5-O-methyl-alpha-D-threo-hex-4-enofuranosyl]oxy}phenyl)-2-methylprop-2-enoyl]amino}-N,N-dimethyladenosine, ...
Authors:Polikanov, Y.S, Starosta, A.L, Juette, M.F, Altman, R.B, Terry, D.S, Lu, W, Burnett, B.J, Dinos, G, Reynolds, K, Blanchard, S.C, Steitz, T.A, Wilson, D.N.
Deposit date:2015-03-31
Release date:2015-06-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
2HPI
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BU of 2hpi by Molmil
Eubacterial and Eukaryotic Replicative DNA Polymerases are not Homologous: X-ray Structure of DNA Polymerase III
Descriptor: CHLORIDE ION, DNA polymerase III alpha subunit, MAGNESIUM ION, ...
Authors:Bailey, S, Wing, R.A, Steitz, T.A.
Deposit date:2006-07-17
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of T. aquaticus DNA Polymerase III Is Distinct from Eukaryotic Replicative DNA Polymerases.
Cell(Cambridge,Mass.), 126, 2006
1D89
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BU of 1d89 by Molmil
A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BEND
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*TP*CP*GP*CP*G)-3')
Authors:DiGabriele, A.D, Steitz, T.A.
Deposit date:1992-07-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend.
J.Mol.Biol., 231, 1993
1QU2
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INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN
Descriptor: ISOLEUCYL-TRNA, ISOLEUCYL-TRNA SYNTHETASE, MAGNESIUM ION, ...
Authors:Silvian, L.F, Wang, J, Steitz, T.A.
Deposit date:1999-07-06
Release date:1999-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insights into editing from an ile-tRNA synthetase structure with tRNAile and mupirocin.
Science, 285, 1999
1CGP
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BU of 1cgp by Molmil
CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*GP*CP*GP*AP*AP*AP*AP*GP*TP*GP*TP*GP*AP*CP*AP*TP*AP*T)-3'), DNA (5'-D(*GP*TP*CP*AP*CP*AP*CP*TP*TP*TP*TP*CP*G)-3'), ...
Authors:Schultz, S.C, Shields, G.C, Steitz, T.A.
Deposit date:1991-08-12
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees.
Science, 253, 1991
1QU3
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BU of 1qu3 by Molmil
INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN
Descriptor: ISOLEUCYL-TRNA, ISOLEUCYL-TRNA SYNTHETASE, MUPIROCIN, ...
Authors:Silvian, L.F, Wang, J, Steitz, T.A.
Deposit date:1999-07-06
Release date:1999-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into editing from an ile-tRNA synthetase structure with tRNAile and mupirocin.
Science, 285, 1999
364D
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BU of 364d by Molmil
3.0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP*GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*GP*UP*GP*GP*GP*G *UP*C)-3'), ...
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-12-08
Release date:1998-01-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
3E3J
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BU of 3e3j by Molmil
Crystal Structure of an Intermediate Complex of T7 RNAP and 8nt of RNA
Descriptor: DNA (28-MER), DNA (5'-D(*DTP*DAP*DAP*DTP*DAP*DCP*DGP*DAP*DCP*DTP*DCP*DAP*DCP*DTP*DAP*DTP*DAP*DTP*DTP*DTP*DCP*DTP*DGP*DCP*DCP*DAP*DAP*DAP*DCP*DGP*DGP*DC)-3'), DNA-directed RNA polymerase, ...
Authors:Durniak, K.J, Bailey, S, Steitz, T.A.
Deposit date:2008-08-07
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (6.7 Å)
Cite:The structure of a transcribing t7 RNA polymerase in transition from initiation to elongation
Science, 322, 2008
2R6C
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Crystal Form BH2
Descriptor: DnaG Primase, Helicase Binding Domain, Replicative helicase
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2008-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
3E2E
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Crystal Structure of an Intermediate Complex of T7 RNAP and 7nt of RNA
Descriptor: DNA (28-MER), DNA (31-MER), DNA-directed RNA polymerase, ...
Authors:Durniak, K.J, Bailey, S, Steitz, T.A.
Deposit date:2008-08-05
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of a transcribing t7 RNA polymerase in transition from initiation to elongation
Science, 322, 2008

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