Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1919 results

6P8G
DownloadVisualize
BU of 6p8g by Molmil
Crystal structure of CDK4 in complex with CyclinD1 and P27
Descriptor: Cyclin-dependent kinase 4, Cyclin-dependent kinase inhibitor 1B, G1/S-specific cyclin-D1
Authors:Guiley, K.Z, Stevenson, J.W, Lou, K, Barkovich, K.J, Bunch, K, Tripathi, S.M, Shokat, K.M, Rubin, S.M.
Deposit date:2019-06-07
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:p27 allosterically activates cyclin-dependent kinase 4 and antagonizes palbociclib inhibition.
Science, 366, 2019
5C6D
DownloadVisualize
BU of 5c6d by Molmil
Crystal structure of USP7 in complex with UHRF1
Descriptor: E3 ubiquitin-protein ligase UHRF1, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Zhang, Z.-M, Song, J.
Deposit date:2015-06-22
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:An Allosteric Interaction Links USP7 to Deubiquitination and Chromatin Targeting of UHRF1.
Cell Rep, 12, 2015
6P8E
DownloadVisualize
BU of 6p8e by Molmil
Crystal structure of CDK4 in complex with CyclinD1 and P27
Descriptor: Cyclin-dependent kinase 4, Cyclin-dependent kinase inhibitor 1B, G1/S-specific cyclin-D1, ...
Authors:Guiley, K.Z, Stevenson, J.W, Lou, K, Barkovich, K.J, Bunch, K, Tripathi, S.M, Shokat, K.M, Rubin, S.M.
Deposit date:2019-06-07
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:p27 allosterically activates cyclin-dependent kinase 4 and antagonizes palbociclib inhibition.
Science, 366, 2019
4WS9
DownloadVisualize
BU of 4ws9 by Molmil
Crystal structure of sMAT N159G from Sulfolobus solfataricus
Descriptor: PHOSPHATE ION, S-adenosylmethionine synthase
Authors:Wang, F, Brady, E.L, Singh, S, Clinger, J.A, Huber, T.D, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2014-10-26
Release date:2014-11-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Crystal structure of sMAT N159G from Sulfolobus solfataricus.
To Be Published
2VXO
DownloadVisualize
BU of 2vxo by Molmil
Human GMP synthetase in complex with XMP
Descriptor: GMP SYNTHASE [GLUTAMINE-HYDROLYZING], SULFATE ION, XANTHOSINE-5'-MONOPHOSPHATE
Authors:Welin, M, Lehtio, L, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wisniewska, M, Wikstrom, M, Nordlund, P.
Deposit date:2008-07-08
Release date:2008-08-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate Specificity and Oligomerization of Human Gmp Synthetase
J.Mol.Biol., 425, 2013
4Z4P
DownloadVisualize
BU of 4z4p by Molmil
Structure of the MLL4 SET Domain
Descriptor: Histone-lysine N-methyltransferase 2D, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Zhang, Z, Mittal, A, Reid, J, Reich, S, Gamblin, S.J, Wilson, J.R.
Deposit date:2015-04-02
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Evolving Catalytic Properties of the MLL Family SET Domain.
Structure, 23, 2015
5GT5
DownloadVisualize
BU of 5gt5 by Molmil
Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602
Descriptor: Pectate lyase
Authors:Zhou, Z.P, Liu, Y, Song, J.N.
Deposit date:2016-08-18
Release date:2017-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Structure-based engineering of a pectate lyase with improved specific activity for ramie degumming.
Appl. Microbiol. Biotechnol., 101, 2017
6JPQ
DownloadVisualize
BU of 6jpq by Molmil
CryoEM structure of Abo1 hexamer - ADP complex
Descriptor: Uncharacterized AAA domain-containing protein C31G5.19
Authors:Cho, C, Jang, J, Song, J.J.
Deposit date:2019-03-27
Release date:2020-08-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.44 Å)
Cite:Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
6GIQ
DownloadVisualize
BU of 6giq by Molmil
Saccharomyces cerevisiae respiratory supercomplex III2IV
Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate, (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate, ...
Authors:Rathore, S, Berndtsson, J, Conrad, J, Ott, M.
Deposit date:2018-05-15
Release date:2019-01-02
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Cryo-EM structure of the yeast respiratory supercomplex.
Nat. Struct. Mol. Biol., 26, 2019
4B05
DownloadVisualize
BU of 4b05 by Molmil
Preclinical characterization of AZD3839, a novel clinical candidate BACE1 inhibitor for the treatment of Alzheimer Disease
Descriptor: (1S)-1-[2-(difluoromethyl)pyridin-4-yl]-4-fluoro-1-(3-pyrimidin-5-ylphenyl)-1H-isoindol-3-amine, ACETATE ION, BETA-SECRETASE 1, ...
Authors:Jeppsson, F, Eketjall, S, Janson, J, Karlstrom, S, Gustavsson, S, Olsson, L.L, Radesater, A.C, Ploeger, B, Cebers, G, Kolmodin, K, Swahn, B.M, von Berg, S, Bueters, T, Falting, J.
Deposit date:2012-06-28
Release date:2012-10-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of AZD3839, a potent and selective BACE1 inhibitor clinical candidate for the treatment of Alzheimer disease.
J. Biol. Chem., 287, 2012
6H2D
DownloadVisualize
BU of 6h2d by Molmil
Structure of the soluble AhlC of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.
Descriptor: AhlC
Authors:Churchill-Angus, A.M, Wilson, J.S, Baker, P.J.
Deposit date:2018-07-13
Release date:2019-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Identification and structural analysis of the tripartite alpha-pore forming toxin of Aeromonas hydrophila.
Nat Commun, 10, 2019
6GRK
DownloadVisualize
BU of 6grk by Molmil
Structure of the soluble AhlB of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.
Descriptor: AhlB
Authors:Churchill-Angus, A.M, Wilson, J.S, Baker, P.J.
Deposit date:2018-06-11
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Identification and structural analysis of the tripartite alpha-pore forming toxin of Aeromonas hydrophila.
Nat Commun, 10, 2019
6H2E
DownloadVisualize
BU of 6h2e by Molmil
Structure of the soluble AhlC of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.
Descriptor: AhlC
Authors:Churchill-Angus, A.M, Wilson, J.S, Baker, P.J.
Deposit date:2018-07-13
Release date:2019-07-10
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification and structural analysis of the tripartite alpha-pore forming toxin of Aeromonas hydrophila.
Nat Commun, 10, 2019
4A2Z
DownloadVisualize
BU of 4a2z by Molmil
CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A PYRAZOLE SULPHONAMIDE LIGAND
Descriptor: 4-METHOXY-2,3,6-TRIMETHYL-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Robinson, D.A, Brand, S, Fairlamb, A.H, Ferguson, M.A.J, Frearson, J.A, Wyatt, P.G.
Deposit date:2011-09-29
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Discovery of a novel class of orally active trypanocidal N-myristoyltransferase inhibitors.
J. Med. Chem., 55, 2012
7CRN
DownloadVisualize
BU of 7crn by Molmil
The Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization
Descriptor: Non-ribosomal peptide synthetase 4
Authors:Yu, J.H, Song, J, Chi, C.B, Ma, M.
Deposit date:2020-08-14
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Functional Characterization and Crystal Structure of the Bifunctional Thioesterase Catalyzing Epimerization and Cyclization in Skyllamycin Biosynthesis
Acs Catalysis, 11, 2021
6JPU
DownloadVisualize
BU of 6jpu by Molmil
CryoEM structure of Abo1 hexamer - apo complex
Descriptor: Uncharacterized AAA domain-containing protein C31G5.19
Authors:Cho, C, Jang, J, Song, J.J.
Deposit date:2019-03-28
Release date:2019-12-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.27 Å)
Cite:Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
6A6K
DownloadVisualize
BU of 6a6k by Molmil
Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
Descriptor: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
Authors:Yoon, H, Kim, J, Chin, J, Cho, S.J, Song, J.
Deposit date:2018-06-28
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer.
J. Med. Chem., 62, 2019
7SI5
DownloadVisualize
BU of 7si5 by Molmil
CRYSTAL STRUCTURE OF EED WITH MRTX-1919
Descriptor: (4R)-8-(1,3-dimethyl-1H-pyrazol-5-yl)-5-{[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]amino}imidazo[1,2-c]pyrimidine-2-carbonitrile, 1,2-ETHANEDIOL, FORMIC ACID, ...
Authors:Gunn, R.J, Burns, A.C, Lawson, J.D, Marx, M.A.
Deposit date:2021-10-12
Release date:2022-11-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:CRYSTAL STRUCTURE OF EED WITH MRTX-1919
TO BE PUBLISHED
7SQ2
DownloadVisualize
BU of 7sq2 by Molmil
Reprocessed and refined structure of Phospholipase C-beta and Gq signaling complex
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, ACETATE ION, CALCIUM ION, ...
Authors:Endo-Streeter, S.T, Sondek, J, Harden, T.K.
Deposit date:2021-11-04
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Kinetic Scaffolding Mediated by a Phospholipase C-{beta} and Gq Signaling Complex
Science, 330, 2010
6P3W
DownloadVisualize
BU of 6p3w by Molmil
Crystal structure of the Cyclin A-CDK2-ORC1 complex
Descriptor: Cyclin-A2, Cyclin-dependent kinase 2, ORC1 Peptide, ...
Authors:Wang, B, Song, J.
Deposit date:2019-05-24
Release date:2019-07-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural basis for the ORC1-Cyclin A association.
Protein Sci., 28, 2019
6PGW
DownloadVisualize
BU of 6pgw by Molmil
Crystal structure of zebrafish Protocadherin-19 EC3-6
Descriptor: CALCIUM ION, Protocadherin-19, SODIUM ION
Authors:Cooper, S.R, Hudson, J.D, Sotomayor, M.
Deposit date:2019-06-24
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:A complete Protocadherin-19 ectodomain model for evaluating epilepsy-causing mutations and potential protein interaction sites.
Structure, 29, 2021
8DT0
DownloadVisualize
BU of 8dt0 by Molmil
Scaffolding protein functional sites using deep learning
Descriptor: Scaffolding protein functional sites
Authors:Bera, A.K, Watson, J, Baker, D.
Deposit date:2022-07-24
Release date:2022-08-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Scaffolding protein functional sites using deep learning.
Science, 377, 2022
6UD6
DownloadVisualize
BU of 6ud6 by Molmil
Spectroscopic and structural characterization of a genetically encoded direct sensor for protein-ligand interactions
Descriptor: CHLORIDE ION, GLYCEROL, Streptavidin
Authors:Mills, J.H, Gleason, P.R, Simmons, C.R, Henderson, J.N, Kartchner, B.K.
Deposit date:2019-09-18
Release date:2020-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Structural Origins of Altered Spectroscopic Properties upon Ligand Binding in Proteins Containing a Fluorescent Noncanonical Amino Acid.
Biochemistry, 60, 2021
6UDC
DownloadVisualize
BU of 6udc by Molmil
Spectroscopic and structural characterization of a genetically encoded direct sensor for protein-ligand interactions
Descriptor: BIOTIN, Streptavidin
Authors:Mills, J.H, Gleason, P.R, Simmons, C.R, Henderson, J.N, Kartchner, B.K.
Deposit date:2019-09-19
Release date:2020-09-23
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Origins of Altered Spectroscopic Properties upon Ligand Binding in Proteins Containing a Fluorescent Noncanonical Amino Acid.
Biochemistry, 60, 2021
6GIK
DownloadVisualize
BU of 6gik by Molmil
NMR structure of temporin B L1FK in SDS micelles
Descriptor: temporinB_L1FK
Authors:Manzo, G, Mason, J.A.
Deposit date:2018-05-12
Release date:2018-06-13
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Minor sequence modifications in temporin B cause drastic changes in antibacterial potency and selectivity by fundamentally altering membrane activity.
Sci Rep, 9, 2019

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon