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PDB: 449 件

6KR6
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BU of 6kr6 by Molmil
Crystal structure of Drosophila Piwi
分子名称: MERCURY (II) ION, Protein piwi, ZINC ION, ...
著者Yamaguchi, S, Oe, A, Yamashita, K, Hirano, S, Mastumoto, N, Ishitani, R, Nishimasu, H, Nureki, O.
登録日2019-08-21
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of Drosophila Piwi.
Nat Commun, 11, 2020
3PUS
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BU of 3pus by Molmil
PHF2 Jumonji-NOG-Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-06
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
3PU3
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BU of 3pu3 by Molmil
PHF2 Jumonji domain-NOG complex
分子名称: 1,2-ETHANEDIOL, GLYCEROL, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
1J1R
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BU of 1j1r by Molmil
Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Adenine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Antiviral Protein S
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
6IRZ
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BU of 6irz by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA
分子名称: 1,2-ETHANEDIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, PDX1 C-terminal-inhibiting factor 1, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2018-11-15
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
7XHT
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BU of 7xht by Molmil
Structure of the OgeuIscB-omega RNA-target DNA complex
分子名称: DNA (49-MER), DNA (5'-D(P*GP*AP*AP*GP*AP*AP*AP*AP*CP*CP*AP*T)-3'), LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Kato, K, Okazaki, O, Isayama, Y, Ishikawa, J, Nishizawa, T, Nishimasu, H.
登録日2022-04-10
公開日2022-12-14
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structure of the IscB-omega RNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9.
Nat Commun, 13, 2022
6IRV
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BU of 6irv by Molmil
Crystal structure of the human cap-specific adenosine methyltransferase
分子名称: Phosphorylated CTD-interacting factor 1
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2018-11-14
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
1J1Q
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BU of 1j1q by Molmil
Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antiviral protein S
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
3PTR
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BU of 3ptr by Molmil
PHF2 Jumonji domain
分子名称: 1,2-ETHANEDIOL, PHD finger protein 2
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
3PUA
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BU of 3pua by Molmil
PHF2 Jumonji-NOG-Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Hashimoto, H, Zhang, X, Cheng, X.
登録日2010-12-03
公開日2011-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406, 2011
1J1S
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BU of 1j1s by Molmil
Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antiviral Protein S, FORMYCIN-5'-MONOPHOSPHATE
著者Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
登録日2002-12-14
公開日2004-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
3AK9
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BU of 3ak9 by Molmil
Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis, FE-soaked form
分子名称: DNA protection during starvation protein, FE (II) ION, MAGNESIUM ION, ...
著者Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
6L96
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BU of 6l96 by Molmil
Structure of PPARalpha-LBD/pemafibrate/SRC1 peptide
分子名称: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, Peroxisome proliferator-activated receptor alpha, SRC1 coactivator peptide
著者Kawasaki, M, Kambe, A, Yamamoto, Y, Arulmozhira, S, Ito, S, Nakagawa, Y, Tokiwa, H, Nakano, S, Shimano, H.
登録日2019-11-08
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Elucidation of Molecular Mechanism of a Selective PPAR alpha Modulator, Pemafibrate, through Combinational Approaches of X-ray Crystallography, Thermodynamic Analysis, and First-Principle Calculations.
Int J Mol Sci, 21, 2020
5XUT
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BU of 5xut by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TCTA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*CP*TP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
4GTZ
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BU of 4gtz by Molmil
Crystal structure of mouse Enpp1 in complex with CMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.191 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
5XUS
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BU of 5xus by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TTTA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
4GTW
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BU of 4gtw by Molmil
Crystal structure of mouse Enpp1 in complex with AMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTY
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BU of 4gty by Molmil
Crystal structure of mouse Enpp1 in complex with GMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
5XUU
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BU of 5xuu by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TCCA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*CP*CP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
1IFA
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BU of 1ifa by Molmil
THREE-DIMENSIONAL CRYSTAL STRUCTURE OF RECOMBINANT MURINE INTERFERON-BETA
分子名称: ASPARAGINE, INTERFERON-BETA
著者Mitsui, Y, Senda, T, Matsuda, S, Kawano, G, Nakamura, K.T, Shimizu, H.
登録日1991-10-29
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Three-dimensional crystal structure of recombinant murine interferon-beta.
EMBO J., 11, 1992
3AK8
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BU of 3ak8 by Molmil
Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
分子名称: DNA protection during starvation protein, MAGNESIUM ION, SULFATE ION
著者Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
5JYJ
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BU of 5jyj by Molmil
Crystal structure of mouse JUNO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sperm-egg fusion protein Juno
著者Kato, K, Nishimasu, H, Morita, J, Ishitani, R, Nureki, O.
登録日2016-05-14
公開日2017-05-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the egg IZUMO1 receptor JUNO
To Be Published
4GTX
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BU of 4gtx by Molmil
Crystal structure of mouse Enpp1 in complex with TMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kato, K, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-08-29
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
7Y9Y
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BU of 7y9y by Molmil
Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
4P1O
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BU of 4p1o by Molmil
Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to ATP-Mg
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Metal transporter CNNM2
著者Corral-Rodriguez, M.A, Stuiver, M, Abascal-Palacios, G, Diercks, T, Oyenarte, I, Ereno-Orbea, J, Encinar, J.A, Spiwok, V, Terashima, H, Accardi, A, Muller, D, Martinez-Cruz, L.A.
登録日2014-02-27
公開日2015-04-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
To Be Published

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件を2024-07-24に公開中

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