PHF2 Jumonji-NOG-Ni(II)

Summary for 3PUA

Related3PTR 3PU3 3PU8 3pua
DescriptorPHD finger protein 2, NICKEL (II) ION, 1,2-ETHANEDIOL, ... (6 entities in total)
Functional Keywordsalpha-ketoglutarate-fe2+ dependent dioxygenases, histone tail binding protein, protein binding
Biological sourceHomo sapiens (human)
Cellular locationNucleus, nucleolus O75151
Total number of polymer chains1
Total molecular weight45639.2
Horton, J.R.,Upadhyay, A.K.,Hashimoto, H.,Zhang, X.,Cheng, X. (deposition date: 2010-12-03, release date: 2011-01-26, Last modification date: 2012-02-29)
Primary citation
Horton, J.R.,Upadhyay, A.K.,Hashimoto, H.,Zhang, X.,Cheng, X.
Structural basis for human PHF2 Jumonji domain interaction with metal ions.
J.Mol.Biol., 406:1-8, 2011
PubMed: 21167174 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2010.12.013
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2085 0.3% 0.3% 3.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-21