Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1957 件

3J8H
DownloadVisualize
BU of 3j8h by Molmil
Structure of the rabbit ryanodine receptor RyR1 in complex with FKBP12 at 3.8 Angstrom resolution
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
著者Yan, Z, Bai, X, Yan, C, Wu, J, Scheres, S.H.W, Shi, Y, Yan, N.
登録日2014-10-26
公開日2014-12-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution.
Nature, 517, 2015
3JB9
DownloadVisualize
BU of 3jb9 by Molmil
Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Yan, C, Hang, J, Wan, R, Huang, M, Wong, C, Shi, Y.
登録日2015-08-09
公開日2015-09-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of a yeast spliceosome at 3.6-angstrom resolution
Science, 349, 2015
3KV6
DownloadVisualize
BU of 3kv6 by Molmil
Structure of KIAA1718, human Jumonji demethylase, in complex with alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
8KCO
DownloadVisualize
BU of 8kco by Molmil
Cryo-EM structure of human gamma-secretase in complex with RO4929097
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2,2-dimethyl-N-[(7S)-6-oxo-5,7-dihydrobenzo[d][1]benzazepin-7-yl]-N'-(2,2,3,3,3-pentafluoropropyl)propanediamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Li, H, Kai, U, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2023-08-08
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献CryoEM structure of PS1-containing gamma-secretase in complex with MRK-560
To Be Published
4O2C
DownloadVisualize
BU of 4o2c by Molmil
An Nt-acetylated peptide complexed with HLA-B*3901
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-39 alpha chain, ...
著者Sun, M, Liu, J, Qi, J, Tefsen, B, Shi, Y, Yan, J, Gao, G.F.
登録日2013-12-17
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献N alpha-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted n alpha-acetylpeptide presentation
J.Immunol., 192, 2014
4O2E
DownloadVisualize
BU of 4o2e by Molmil
A peptide complexed with HLA-B*3901
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-39 alpha chain, ...
著者Sun, M, Liu, J, Qi, J, Tefsen, B, Shi, Y, Yan, J, Gao, G.F.
登録日2013-12-17
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献N alpha-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted n alpha-acetylpeptide presentation
J.Immunol., 192, 2014
4O2F
DownloadVisualize
BU of 4o2f by Molmil
A peptide complexed with HLA-B*3901
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-39 alpha chain, ...
著者Sun, M, Liu, J, Qi, J, Tefsen, B, Shi, Y, Yan, J, Gao, G.F.
登録日2013-12-17
公開日2014-07-23
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献N alpha-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted n alpha-acetylpeptide presentation
J.Immunol., 192, 2014
6LNL
DownloadVisualize
BU of 6lnl by Molmil
ASFV core shell protein p15
分子名称: 60 kDa polyprotein
著者Guo, F, Shi, Y, Peng, G.
登録日2019-12-30
公開日2020-12-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9286 Å)
主引用文献The structural basis of African swine fever virus core shell protein p15 binding to DNA.
Faseb J., 35, 2021
6LXK
DownloadVisualize
BU of 6lxk by Molmil
Crystal structure of Z2B3 D102R Fab in complex with influenza virus neuraminidase from A/Serbia/NS-601/2014 (H1N1)
分子名称: CALCIUM ION, Heavy chain of Z2B3-D102R Fab, Light chain of Z2B3-D102R Fab, ...
著者Jiang, H, Peng, W, Qi, J, Chai, Y, Song, H, Shi, Y, Gao, G.F, Wu, Y.
登録日2020-02-11
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.608 Å)
主引用文献Structure-Based Modification of an Anti-neuraminidase Human Antibody Restores Protection Efficacy against the Drifted Influenza Virus.
Mbio, 11, 2020
4O79
DownloadVisualize
BU of 4o79 by Molmil
Crystal Structure of Ascorbate-bound Cytochrome b561, crystal soaked in 1 M L-ascorbate for 10 minutes
分子名称: ASCORBIC ACID, PROTOPORPHYRIN IX CONTAINING FE, Probable transmembrane ascorbate ferrireductase 2, ...
著者Lu, P, Ma, D, Yan, C, Gong, X, Du, M, Shi, Y.
登録日2013-12-24
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Structure and mechanism of a eukaryotic transmembrane ascorbate-dependent oxidoreductase
Proc.Natl.Acad.Sci.USA, 111, 2014
3KV5
DownloadVisualize
BU of 3kv5 by Molmil
Structure of KIAA1718, human Jumonji demethylase, in complex with N-oxalylglycine
分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KVA
DownloadVisualize
BU of 3kva by Molmil
Structure of KIAA1718 Jumonji domain in complex with alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KV4
DownloadVisualize
BU of 3kv4 by Molmil
Structure of PHF8 in complex with histone H3
分子名称: 1,2-ETHANEDIOL, FE (II) ION, Histone H3-like, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3L1L
DownloadVisualize
BU of 3l1l by Molmil
Structure of Arg-bound Escherichia coli AdiC
分子名称: ARGININE, Arginine/agmatine antiporter, nonyl beta-D-glucopyranoside
著者Gao, X, Zhou, L, Shi, Y.
登録日2009-12-13
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Mechanism of substrate recognition and transport by an amino acid antiporter
Nature, 463, 2010
3LRB
DownloadVisualize
BU of 3lrb by Molmil
Structure of E. coli AdiC
分子名称: Arginine/agmatine antiporter
著者Gao, X, Lu, F, Zhou, L, Shi, Y.
登録日2010-02-10
公開日2010-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.61 Å)
主引用文献Structure and mechanism of an amino acid antiporter
Science, 324, 2009
4O6Y
DownloadVisualize
BU of 4o6y by Molmil
Crystal Structure of Cytochrome b561
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Probable transmembrane ascorbate ferrireductase 2, SULFATE ION
著者Lu, P, Ma, D, Yan, C, Gong, X, Du, M, Shi, Y.
登録日2013-12-24
公開日2014-02-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and mechanism of a eukaryotic transmembrane ascorbate-dependent oxidoreductase
Proc.Natl.Acad.Sci.USA, 111, 2014
4O7G
DownloadVisualize
BU of 4o7g by Molmil
Crystal Structure of Ascorbate-bound Cytochrome b561, crystal soaked in 1 M L-ascorbate for 40 minutes
分子名称: ASCORBIC ACID, PROTOPORPHYRIN IX CONTAINING FE, Probable transmembrane ascorbate ferrireductase 2, ...
著者Lu, P, Ma, D, Yan, C, Gong, X, Du, M, Shi, Y.
登録日2013-12-24
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Structure and mechanism of a eukaryotic transmembrane ascorbate-dependent oxidoreductase
Proc.Natl.Acad.Sci.USA, 111, 2014
6KLB
DownloadVisualize
BU of 6klb by Molmil
Structure of LbCas12a-crRNA complex bound to AcrVA4 (form B complex)
分子名称: AcrVA4, LbCas12a, MAGNESIUM ION, ...
著者Peng, R, Li, Z, Xu, Y, He, S, Peng, Q, Shi, Y, Gao, G.F.
登録日2019-07-30
公開日2019-09-11
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insight into multistage inhibition of CRISPR-Cas12a by AcrVA4.
Proc.Natl.Acad.Sci.USA, 116, 2019
5E64
DownloadVisualize
BU of 5e64 by Molmil
Hemagglutinin-esterase-fusion protein structure of influenza D virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
4H32
DownloadVisualize
BU of 4h32 by Molmil
The crystal structure of the hemagglutinin H17 derived the bat influenza A virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Sun, X, Shi, Y, Lu, X, He, J, Gao, F, Yan, J, Qi, J, Gao, G.F.
登録日2012-09-13
公開日2013-07-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Bat-derived influenza hemagglutinin H17 does not bind canonical avian or human receptors and most likely uses a unique entry mechanism.
Cell Rep, 3, 2013
1KKX
DownloadVisualize
BU of 1kkx by Molmil
Solution structure of the DNA-binding domain of ADR6
分子名称: Transcription regulatory protein ADR6
著者Tu, X, Wu, J, Xu, Y, Shi, Y.
登録日2001-12-10
公開日2002-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain.
J.Biomol.Nmr, 21, 2001
6KUJ
DownloadVisualize
BU of 6kuj by Molmil
Structure of influenza D virus polymerase bound to cRNA promoter in class 1
分子名称: 3'-cRNA promoter, 5'-cRNA promoter, Polymerase 3, ...
著者Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y.
登録日2019-09-02
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of influenza D virus polymerase bound to cRNA promoter in Mode A conformation
NAT NANOTECHNOL, 2019
4HYD
DownloadVisualize
BU of 4hyd by Molmil
Structure of a presenilin family intramembrane aspartate protease in C2221 space group
分子名称: Putative uncharacterized protein
著者Li, X, Dang, S, Yan, C, Wang, J, Shi, Y.
登録日2012-11-13
公開日2012-12-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of a presenilin family intramembrane aspartate protease
Nature, 493, 2013
3T7J
DownloadVisualize
BU of 3t7j by Molmil
Crystal structure of Rtt107p (residues 820-1070)
分子名称: Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
1KN5
DownloadVisualize
BU of 1kn5 by Molmil
SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE
分子名称: Transcription regulatory protein ADR6
著者Tu, X, Wu, J, Xu, Y, Shi, Y.
登録日2001-12-18
公開日2002-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain.
J.Biomol.Nmr, 21, 2001

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon