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PDB: 259 results

2QVI
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BU of 2qvi by Molmil
Crystal structure of N-cadherin domains EC12
Descriptor: CALCIUM ION, Cadherin-2
Authors:Shapiro, L.S, Carroll, K.J.
Deposit date:2007-08-08
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.012 Å)
Cite:Biophysical characterization of N-cadherin and E-cadherin homophilic and heterophilic interactions
To be Published
3K6I
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BU of 3k6i by Molmil
Crystal structure of chicken T-cadherin EC1
Descriptor: T-cadherin, ZINC ION
Authors:Shapiro, L, Ciatto, C.
Deposit date:2009-10-08
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol., 17, 2010
3K5R
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BU of 3k5r by Molmil
Crystal Structure of mouse T-cadherin EC1 EC2
Descriptor: Cadherin 13
Authors:Shapiro, L, Ciatto, C.
Deposit date:2009-10-07
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol., 17, 2010
3K6D
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BU of 3k6d by Molmil
Crystal structure of Xenopus laevis T-cadherin EC1
Descriptor: T-cadherin, ZINC ION
Authors:Shapiro, L, Ciatto, C.
Deposit date:2009-10-08
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol., 17, 2010
3K6F
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BU of 3k6f by Molmil
Crystal structure of mouse T-cadherin EC1
Descriptor: T-cadherin
Authors:Shapiro, L, Ciatto, C.
Deposit date:2009-10-08
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.813 Å)
Cite:T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol., 17, 2010
1C28
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BU of 1c28 by Molmil
THE CRYSTAL STRUCTURE OF A COMPLMENT-1Q FAMILY PROTEIN SUGGESTS AN EVOLUTIONARY LINK TO TUMOR NECROSIS FACTOR
Descriptor: PROTEIN (30 KD ADIPOCYTE COMPLEMENT-RELATED PROTEIN PRECURSOR (ACRP30))
Authors:Shapiro, L, Scherer, P.
Deposit date:1999-07-22
Release date:1999-08-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of a complement-1q family protein suggests an evolutionary link to tumor necrosis factor.
Curr.Biol., 8, 1998
1C3H
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BU of 1c3h by Molmil
ACRP30 CALCIUM COMPLEX
Descriptor: 30 KD ADIPOCYTE COMPLEMENT-RELATED PROTEIN PRECURSOR, CALCIUM ION
Authors:Shapiro, L, Boggon, T, Scherer, P.
Deposit date:1999-07-27
Release date:2003-12-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:ACRP30 calcium complex
To Be Published
1NCI
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BU of 1nci by Molmil
STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS
Descriptor: N-CADHERIN, URANYL (VI) ION
Authors:Shapiro, L, Fannon, A.M, Kwong, P.D, Thompson, A, Lehmann, M.S, Grubel, G, Legrand, J.-F, Als-Nielsen, J, Colman, D.R, Hendrickson, W.A.
Deposit date:1995-03-23
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of cell-cell adhesion by cadherins.
Nature, 374, 1995
1NEU
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BU of 1neu by Molmil
STRUCTURE OF MYELIN MEMBRANE ADHESION MOLECULE P0
Descriptor: MYELIN P0 PROTEIN
Authors:Shapiro, L, Doyle, J.P, Hensley, P, Colman, D.R, Hendrickson, W.A.
Deposit date:1996-09-24
Release date:1997-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the extracellular domain from P0, the major structural protein of peripheral nerve myelin.
Neuron, 17, 1996
1NCH
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BU of 1nch by Molmil
STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS
Descriptor: N-CADHERIN, YTTERBIUM (III) ION
Authors:Shapiro, L, Fannon, A.M, Kwong, P.D, Thompson, A, Lehmann, M.S, Grubel, G, Legrand, J.-F, Als-Nielsen, J, Colman, D.R, Hendrickson, W.A.
Deposit date:1995-03-23
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of cell-cell adhesion by cadherins.
Nature, 374, 1995
1NCG
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BU of 1ncg by Molmil
STRUCTURAL BASIS OF CELL-CELL ADHESION BY CADHERINS
Descriptor: N-CADHERIN, YTTERBIUM (III) ION
Authors:Shapiro, L, Fannon, A.M, Kwong, P.D, Thompson, A, Lehmann, M.S, Grubel, G, Legrand, J.-F, Als-Nielsen, J, Colman, D.R, Hendrickson, W.A.
Deposit date:1995-03-23
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of cell-cell adhesion by cadherins.
Nature, 374, 1995
3K5S
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BU of 3k5s by Molmil
Crystal structure of chicken T-cadherin EC1 EC2
Descriptor: CALCIUM ION, Cadherin-13
Authors:Shapiro, L, Ciatto, C.
Deposit date:2009-10-07
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol., 17, 2010
6WUD
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BU of 6wud by Molmil
Human Calcium and Integrin Binding Protein 3 Bound to TMC1 Residues 303-347
Descriptor: Calcium and integrin-binding family member 3, MAGNESIUM ION, Transmembrane channel-like protein 1
Authors:Shapiro, L, Dionne, G.
Deposit date:2020-05-04
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:CIB2 and CIB3 are auxiliary subunits of the mechanotransduction channel of hair cells.
Neuron, 109, 2021
6WU7
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BU of 6wu7 by Molmil
Human Calcium and Integrin Binding Protein 3 E150Q K151H
Descriptor: ACETATE ION, CALCIUM ION, Calcium and integrin-binding family member 3
Authors:Shapiro, L, Dionne, G.
Deposit date:2020-05-04
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:CIB2 and CIB3 are auxiliary subunits of the mechanotransduction channel of hair cells.
Neuron, 109, 2021
7M8K
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BU of 7m8k by Molmil
Cryo-EM structure of Brazil (P.1) SARS-CoV-2 spike glycoprotein variant in the prefusion state (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Casner, R.G, Cerutti, G, Shapiro, L, Ho, D.D.
Deposit date:2021-03-29
Release date:2021-05-05
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Increased resistance of SARS-CoV-2 variant P.1 to antibody neutralization.
Cell Host Microbe, 29, 2021
1ZVN
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BU of 1zvn by Molmil
Crystal structure of chick MN-cadherin EC1
Descriptor: Cadherin 1
Authors:Patel, S.D, Ciatto, C, Chen, C.P, Bahna, F, Schieren, I, Rajebhosale, M, Jessell, T.M, Honig, B, Shapiro, L, Price, S.R.
Deposit date:2005-06-02
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Type II cadherin ectodomain structures: implications for classical cadherin specificity.
Cell(Cambridge,Mass.), 124, 2006
8DER
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BU of 8der by Molmil
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SKV16 Fab Heavy Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DEQ
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BU of 8deq by Molmil
Cryo-EM local refinement of antibody SKV09 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SKV09 Fab Heavy Chain, SKV09 Fab Light Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
9EKF
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BU of 9ekf by Molmil
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab 65C6 and an auto glycan occupying the receptor-binding site
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 65C6 Heavy Chain, Fab 65C6 Light Chain, ...
Authors:Morano, N.C, Shapiro, L, Kwong, P.D.
Deposit date:2024-12-02
Release date:2024-12-18
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structure of a zoonotic H5N1 hemagglutinin reveals a receptor-binding site occupied by an auto-glycan.
Structure, 33, 2025
7N5H
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BU of 7n5h by Molmil
Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein
Descriptor: 2-36 Fab heavy chain, 2-36 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Casner, R.G, Cerutti, G, Shapiro, L.
Deposit date:2021-06-05
Release date:2021-11-03
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:A monoclonal antibody that neutralizes SARS-CoV-2 variants, SARS-CoV, and other sarbecoviruses.
Emerg Microbes Infect, 11, 2022
8CSJ
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BU of 8csj by Molmil
Cryo-EM structure of NTD-directed non-neutralizing antibody 4-33 in complex with prefusion SARS-CoV-2 spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(2-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Reddem, E.R, Shapiro, L.
Deposit date:2022-05-12
Release date:2023-05-17
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Cryo-EM structure of NTD-directed non-neutralizing antibody 4-33 in complex with prefusion SARS-CoV-2 spike glycoprotein
To Be Published
7MXP
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BU of 7mxp by Molmil
Cryo-EM structure of NTD-directed neutralizing antibody LP5 Fab in complex with SARS-CoV-2 S2P spike
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)][beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Reddem, E.R, Casner, R.G, Shapiro, L.
Deposit date:2021-05-19
Release date:2022-05-25
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS-CoV-2.
Aiche J, 67, 2021
9D3D
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BU of 9d3d by Molmil
Cryo-EM structure of PGT145 R100aS Fab bound to HIV-1 BG505 DS-SOSIP.664 Env trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 DS-SOSIP glycoprotein gp41, ...
Authors:Hodges, S, Morano, N.C, Shapiro, L, Kwong, P.D, Gorman, J.
Deposit date:2024-08-09
Release date:2024-12-25
Last modified:2025-02-05
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structural development of the HIV-1 apex-directed PGT145-PGDM1400 antibody lineage.
Cell Rep, 44, 2025
9D1W
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BU of 9d1w by Molmil
Cryo-EM structure of PGDM1400 Fab bound to HIV-1 BG505 DS-SOSIP.664 Env trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 BG505 DS-SOSIP glycoprotein gp41, ...
Authors:Kanai, T, Morano, N.C, Shapiro, L, Kwong, P.D, Gorman, J.
Deposit date:2024-08-08
Release date:2024-12-25
Last modified:2025-02-05
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural development of the HIV-1 apex-directed PGT145-PGDM1400 antibody lineage.
Cell Rep, 44, 2025
8G4M
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BU of 8g4m by Molmil
Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Wang, S, Morano, N.C, Shapiro, L, Kwong, P.D.
Deposit date:2023-02-10
Release date:2023-07-12
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide.
Cell Rep, 42, 2023

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