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PDB: 63 results

6ZI2
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BU of 6zi2 by Molmil
OleP-oleandolide(DEO) in low salt crystallization conditions
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Parisi, G, Cecchetti, C.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
1QI7
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BU of 1qi7 by Molmil
THE CRYSTAL STRUCTURE AT 2.0 A OF SAPORIN SO6, A RIBOSOME INACTIVATING PROTEIN FROM SAPONARIA OFFICINALIS
Descriptor: PROTEIN (N-GLYCOSIDASE), SULFATE ION
Authors:Savino, C, Federici, L, Ippoliti, R, Lendaro, E, Tsernoglou, D.
Deposit date:1999-06-08
Release date:2000-06-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of saporin SO6 from Saponaria officinalis and its interaction with the ribosome.
FEBS Lett., 470, 2000
1S5J
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BU of 1s5j by Molmil
Insight in DNA Replication: The crystal structure of DNA Polymerase B1 from the archaeon Sulfolobus solfataricus
Descriptor: DNA polymerase I, MAGNESIUM ION, SULFATE ION
Authors:Savino, C, Federici, L, Nastopoulos, V, Johnson, K.A, Pisani, F.M, Rossi, M, Tsernoglou, D.
Deposit date:2004-01-21
Release date:2004-11-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into DNA replication: the crystal structure of DNA polymerase B1 from the archaeon Sulfolobus solfataricus
Structure, 12, 2004
2JJN
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BU of 2jjn by Molmil
Structure of closed cytochrome P450 EryK
Descriptor: CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2JJO
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Structure of cytochrome P450 EryK in complex with its natural substrate erD
Descriptor: CYTOCHROME P450 113A1, Erythromycin D, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2JJP
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Structure of cytochrome P450 EryK in complex with inhibitor ketoconazole (KC)
Descriptor: 1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE, CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B.
Deposit date:2008-04-15
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
7Q6X
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BU of 7q6x by Molmil
OleP mutant S240Y in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
7Q89
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BU of 7q89 by Molmil
OleP mutant G92W in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-10
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
7Q6R
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BU of 7q6r by Molmil
OleP mutant E89Y in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
5N9X
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BU of 5n9x by Molmil
Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, ligand bound structure
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylation domain, MAGNESIUM ION, ...
Authors:Savino, C, Vallone, B, Scaglione, A, Parisi, G, Montemiglio, L.C, Fullone, M.R, Grgurina, I.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity.
FEBS J., 284, 2017
5N9W
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BU of 5n9w by Molmil
Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, apo structure
Descriptor: ACETATE ION, Adenylation domain
Authors:Savino, C, Vallone, B, Scaglione, A, Parisi, G, Montemiglio, L.C, Fullone, M.R, Grgurina, I.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.456 Å)
Cite:Structure of the adenylation domain Thr1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces sp. OH-5093-protein flexibility and molecular bases of substrate specificity.
FEBS J., 284, 2017
2WIO
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BU of 2wio by Molmil
Structure of the histidine tagged, open cytochrome P450 Eryk from S. erythraea
Descriptor: ERYTHROMYCIN B/D C-12 HYDROXYLASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Montemiglio, L.C, Sciara, G, Miele, A.E, Kedrew, S.G, Gianni, S, Vallone, B.
Deposit date:2009-05-14
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
2XFH
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BU of 2xfh by Molmil
Structure of cytochrome P450 EryK cocrystallized with inhibitor clotrimazole.
Descriptor: 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE, DIMETHYL SULFOXIDE, ERYTHROMYCIN B/D C-12 HYDROXYLASE, ...
Authors:Savino, C, Montemiglio, L.C, Gianni, S, Vallone, B.
Deposit date:2010-05-24
Release date:2010-09-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Azole Drugs Trap Cytochrome P450 Eryk in Alternative Conformational States.
Biochemistry, 49, 2010
6I3T
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BU of 6i3t by Molmil
Crystal structure of murine neuroglobin bound to CO at 40 K.
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C.
Deposit date:2018-11-07
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
6I40
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BU of 6i40 by Molmil
Crystal structure of murine neuroglobin bound to CO at 15K under illumination using optical fiber
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C, Vallone, B.
Deposit date:2018-11-08
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
2W6W
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BU of 2w6w by Molmil
Crystal structure of recombinant Sperm Whale Myoglobin under 1atm of Xenon
Descriptor: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Miele, A.E, Draghi, F, Renzi, F, Sciara, G, Johnson, K.A, Vallone, B, Brunori, M, Savino, C.
Deposit date:2008-12-19
Release date:2009-04-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Pattern of Cavities in Globins: The Case of Human Hemoglobin.
Biopolymers, 91, 2009
3IF9
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BU of 3if9 by Molmil
Crystal structure of Glycine Oxidase G51S/A54R/H244A mutant in complex with inhibitor glycolate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCOLIC ACID, Glycine oxidase
Authors:Pedotti, M, Rosini, E, Molla, G, Moschetti, T, Vallone, B, Savino, C, Pollegioni, L.
Deposit date:2009-07-24
Release date:2009-10-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glyphosate resistance by engineering the flavoenzyme glycine oxidase.
J.Biol.Chem., 284, 2009
8QYI
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BU of 8qyi by Molmil
OleP in complex with lithocholic acid in high salt crystallization conditions
Descriptor: (3beta,5beta,14beta,17alpha)-3-hydroxycholan-24-oic acid, Cytochrome P-450, FORMIC ACID, ...
Authors:Fata, F, Costanzo, A, Freda, I, Gugole, E, Bulfaro, G, Barbizzi, L, Di Renzo, M, Savino, C, Vallone, B, Montemiglio, L.C.
Deposit date:2023-10-26
Release date:2024-07-03
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Binding of steroid substrates reveals the key to the productive transition of the cytochrome P450 OleP.
Structure, 32, 2024
4XE3
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BU of 4xe3 by Molmil
OleP, the cytochrome P450 epoxidase from Streptomyces antibioticus involved in Oleandomycin biosynthesis: functional analysis and crystallographic structure in complex with clotrimazole.
Descriptor: 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE, Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Montemiglio, L.C, Parisi, G, Scaglione, A, Savino, C, Vallone, B.
Deposit date:2014-12-22
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Functional analysis and crystallographic structure of clotrimazole bound OleP, a cytochrome P450 epoxidase from Streptomyces antibioticus involved in oleandomycin biosynthesis.
Biochim.Biophys.Acta, 1860, 2015
1HG8
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BU of 1hg8 by Molmil
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOPOLYGALACTURONASE
Authors:Federici, L, Caprari, C, Mattei, B, Savino, C, De Lorenzo, G, Cervone, F, Tsernoglou, D.
Deposit date:2000-12-13
Release date:2001-11-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural Requirements of Endopolygalacturonase for the Interaction with Pgip (Polygalacturonase-Inhibiting Protein)
Proc.Natl.Acad.Sci.USA, 98, 2001
3HW7
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BU of 3hw7 by Molmil
High pressure (0.57 GPa) crystal structure of bovine copper, zinc superoxide dismutase at 2.0 angstroms
Descriptor: COPPER (I) ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
Authors:Ascone, I, Savino, C.
Deposit date:2009-06-17
Release date:2010-06-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility of the Cu,Zn superoxide dismutase structure investigated at 0.57 GPa
Acta Crystallogr.,Sect.D, 66, 2010
8QRD
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BU of 8qrd by Molmil
OleP in complex with testosterone in high salt crystallization conditions
Descriptor: Cytochrome P-450, FORMIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fata, F, Costanzo, A, Freda, I, Gugole, E, Bulfaro, G, Barbizzi, L, Di Renzo, M, Savino, C, Vallone, B, Montemiglio, L.C.
Deposit date:2023-10-06
Release date:2024-07-03
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Binding of steroid substrates reveals the key to the productive transition of the cytochrome P450 OleP.
Structure, 32, 2024
6ZI3
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BU of 6zi3 by Molmil
Crystal structure of OleP-6DEB bound to L-rhamnose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Freda, I.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
6ZHZ
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BU of 6zhz by Molmil
OleP-oleandolide(DEO) in high salt crystallization conditions
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome P-450, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Cecchetti, C.
Deposit date:2020-06-24
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
6RA6
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BU of 6ra6 by Molmil
Ferric murine neuroglobin Gly-loop44-47/F106A mutant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Exertier, C, Freda, I, Montemiglio, L.C, Savino, C, Vallone, B.
Deposit date:2019-04-05
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lack of orientation selectivity of the heme insertion in murine neuroglobin revealed by resonance Raman spectroscopy.
Febs J., 287, 2020

 

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