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PDB: 1014 results

4Q3L
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Crystal structure of MGS-M2, an alpha/beta hydrolase enzyme from a Medee basin deep-sea metagenome library
Descriptor: GLYCEROL, MGS-M2
Authors:Stogios, P.J, Xu, X, Cui, H, Alcaide, M, Ferrer, M, Savchenko, A.
Deposit date:2014-04-11
Release date:2015-02-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.
Environ Microbiol, 17, 2015
1U0K
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BU of 1u0k by Molmil
The structure of a Predicted Epimerase PA4716 from Pseudomonas aeruginosa
Descriptor: gene product PA4716
Authors:Cuff, M.E, Ginell, S.L, Rotella, F.J, Xu, X, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-07-13
Release date:2004-09-14
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of hypothetical protein PA4716 from Pseudomonas aeruginosa
TO BE PUBLISHED
4EBK
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Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound
Descriptor: 1,2-ETHANEDIOL, Aminoglycoside nucleotidyltransferase, CHLORIDE ION, ...
Authors:Stogios, P.J, Dong, A, Minasov, G, Evdokimova, E, Egorova, O, Yim, V, Kudritska, M, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-23
Release date:2012-04-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound
To be Published
1YSQ
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BU of 1ysq by Molmil
The crystal structure of transcriptional regulator YaiJ
Descriptor: HTH-type transcriptional regulator yiaJ, PHOSPHATE ION
Authors:Bochkarev, A, Lunin, V.V, Ezersky, A, Evdokimova, E, Skarina, T, Xu, X, Borek, D, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-08
Release date:2005-03-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
4EHI
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An X-ray Crystal Structure of a putative Bifunctional Phosphoribosylaminoimidazolecarboxamide Formyltransferase/IMP Cyclohydrolase
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifunctional purine biosynthesis protein PurH, SULFATE ION
Authors:Brunzelle, J.S, Wawrzak, Z, Onopriyenko, O, Kwok, J, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-02
Release date:2012-06-06
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:An X-ray Crystal Structure of a putative Bifunctional Phosphoribosylaminoimidazolecarboxamide Formyltransferase/IMP Cyclohydrolase
TO BE PUBLISHED
4EHJ
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An X-ray Structure of a Putative Phosphogylcerate Kinase from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: Phosphoglycerate kinase, SULFATE ION
Authors:Brunzelle, J.S, Wawrzak, Z, Skarina, T, Gordon, E, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-02
Release date:2012-05-09
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:An X-ray Structure of a Putative Phosphogylcerate Kinase from Francisella tularensis subsp. tularensis SCHU S4
To be Published
1ZKI
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BU of 1zki by Molmil
Structure of conserved protein PA5202 from Pseudomonas aeruginosa
Descriptor: ACETIC ACID, hypothetical protein PA5202
Authors:Cuff, M.E, Evdokimova, E, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-05-02
Release date:2005-06-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and activity of the Pseudomonas aeruginosa hotdog-fold thioesterases PA5202 and PA2801.
Biochem.J., 444, 2012
1ZL0
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Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Osipiuk, J, Evdokimova, E, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-05-04
Release date:2005-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:X-ray crystal structure of hypothetical protein PA5198 at 1.1 A resolution.
To be Published
2QH1
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BU of 2qh1 by Molmil
Structure of TA289, a CBS-rubredoxin-like protein, in its Fe+2-bound state
Descriptor: FE (II) ION, Hypothetical protein Ta0289
Authors:Singer, A.U, Proudfoot, M, Brown, G, Xu, L, Savchenko, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-06-29
Release date:2008-02-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural characterization of a novel family of cystathionine beta-synthase domain proteins fused to a Zn ribbon-like domain.
J.Mol.Biol., 375, 2008
4GD5
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BU of 4gd5 by Molmil
X-ray Crystal Structure of a Putative Phosphate ABC Transporter Substrate-Binding Protein with Bound Phosphate from Clostridium perfringens
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Brunzelle, J.S, Wawrzak, Z, Onopriyenko, O, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-07-31
Release date:2012-08-15
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray Crystal Structure of a Putative Phosphate ABC Transporter Substrate-Binding Protein with Bound Phosphate from Clostridium perfringens
To be Published
4O96
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2.60 Angstrom resolution crystal structure of a protein kinase domain of type III effector NleH2 (ECs1814) from Escherichia coli O157:H7 str. Sakai
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, type III effector protein kinase
Authors:Anderson, S.M, Halavaty, A.S, Wawrzak, Z, Kudritska, M, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-01
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Type III Effector NleH2 from Escherichia coli O157:H7 str. Sakai Features an Atypical Protein Kinase Domain.
Biochemistry, 53, 2014
5UE7
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BU of 5ue7 by Molmil
Crystal structure of the phosphomannomutase PMM1 from Candida albicans, apoenzyme state
Descriptor: CHLORIDE ION, MAGNESIUM ION, Phosphomannomutase
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-12-29
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the phosphomannomutase PMM1 from Candida albicans, apoenzyme state
To Be Published
4JJP
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2.06 Angstrom resolution crystal structure of phosphomethylpyrimidine kinase (thiD)from Clostridium difficile 630
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Phosphomethylpyrimidine kinase
Authors:Halavaty, A.S, Wawrzak, Z, Onopriyenko, O, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-03-08
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.056 Å)
Cite:2.06 Angstrom resolution crystal structure of phosphomethylpyrimidine kinase (thiD)from Clostridium difficile 630
To be Published
3SVI
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BU of 3svi by Molmil
Structure of the Pto-binding domain of HopPmaL generated by limited thermolysin digestion
Descriptor: CHLORIDE ION, SODIUM ION, SULFATE ION, ...
Authors:Singer, A.U, Stein, A, Xu, X, Cui, H, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-07-12
Release date:2011-08-10
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of HopPmaL Reveals the Presence of a Second Adaptor Domain Common to the HopAB Family of Pseudomonas syringae Type III Effectors.
Biochemistry, 51, 2012
5UF8
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BU of 5uf8 by Molmil
Crystal structure of the ARF family small GTPase ARF2 from Candida albicans in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Potential ADP-ribosylation factor
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-01-03
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.872 Å)
Cite:Crystal structure of the ARF family small GTPase ARF2 from Candida albicans in complex with GDP
To Be Published
4KSN
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BU of 4ksn by Molmil
C-terminal domain of SdbC protein from Legionella pneumophila.
Descriptor: SdbC, UNKNOWN LIGAND
Authors:Osipiuk, J, Evdokimova, E, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-17
Release date:2013-06-19
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:C-terminal domain of SdbC protein from Legionella pneumophila.
To be Published
5T06
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BU of 5t06 by Molmil
Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA
Descriptor: 1,2-ETHANEDIOL, Acyl-CoA thioester hydrolase YbgC, HEXANOYL-COENZYME A
Authors:Watanabe, N, Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-08-15
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with Hexanoyl-CoA
To be published
5U8J
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Crystal structure of a protein of unknown function ECL_02571 involved in membrane biogenesis from Enterobacter cloacae
Descriptor: CHLORIDE ION, UPF0502 protein BFJ73_07745
Authors:Stogios, P.J, Skarina, T, Sandoval, J, Grimshaw, S, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-12-14
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of a protein of unknown function ECL_02571 involved in membrane biogenesis from Enterobacter cloacae
To Be Published
4MUS
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BU of 4mus by Molmil
Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Ala-D-Ala phosphinate analog
Descriptor: (2R)-3-[(R)-[(1R)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid, (2R)-3-[(R)-[(1S)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid, CHLORIDE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Meziane-Cherif, D, Di Leo, R, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-09-23
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.675 Å)
Cite:Structural basis for the evolution of vancomycin resistance D,D-peptidases.
Proc.Natl.Acad.Sci.USA, 111, 2014
4JCC
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BU of 4jcc by Molmil
Crystal structure of iron uptake ABC transporter substrate-binding protein PiuA from Streptococcus pneumoniae Canada MDR_19A
Descriptor: CHLORIDE ION, ISOPROPYL ALCOHOL, Iron-compound ABC transporter, ...
Authors:Stogios, P.J, Wawrzak, Z, Kudritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-02-21
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.133 Å)
Cite:Crystal structure of iron uptake ABC transporter substrate-binding protein PiuA from Streptococcus pneumoniae Canada MDR_19A
TO BE PUBLISHED
6B3N
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BU of 6b3n by Molmil
Solution structure of the N-terminal domain of the effector NleG5-1 from Escherichia coli O157:H7 str. Sakai
Descriptor: NleG5-1
Authors:Valleau, D, Houliston, S, Lemak, A, Anderson, W.F, Arrowsmith, C, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-09-22
Release date:2017-11-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain of the effector NleG5-1 from Escherichia coli O157:H7 str. Sakai
To Be Published
4DFU
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BU of 4dfu by Molmil
Inhibition of an antibiotic resistance enzyme: crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA in complex with kanamycin inhibited with quercetin
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, APH(2")-Id, CHLORIDE ION, ...
Authors:Stogios, P.J, Minasov, G, Dong, A, Evdokimova, E, Egorova, E, Di Leo, R, Li, H, Shakya, T, Wright, G.D, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-01-24
Release date:2012-02-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A small molecule discrimination map of the antibiotic resistance kinome.
Chem.Biol., 18, 2011
4JG9
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BU of 4jg9 by Molmil
X-ray Crystal Structure of a Putative Lipoprotein from Bacillus anthracis
Descriptor: Lipoprotein
Authors:Brunzelle, J.S, Wawrzak, Z, Onopriyenko, O, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-02-28
Release date:2013-03-20
Method:X-RAY DIFFRACTION (2.425 Å)
Cite:X-ray Crystal Structure of a Putative Lipoprotein from Bacillus anthracis
To be Published
4PVA
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BU of 4pva by Molmil
Crystal structure of GH62 hydrolase from thermophilic fungus Scytalidium thermophilum
Descriptor: GH62 hydrolase, GLYCEROL, PHOSPHATE ION
Authors:Nocek, B, Kaur, A.P, Xu, X, Cui, H, Savchenko, A.
Deposit date:2014-03-15
Release date:2014-11-19
Last modified:2015-05-06
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Functional and structural diversity in GH62 alpha-L-arabinofuranosidases from the thermophilic fungus Scytalidium thermophilum.
Microb Biotechnol, 8, 2015
4GKI
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Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor 1-NM-PP1
Descriptor: 1-tert-butyl-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, ACETATE ION, Aminoglycoside 3'-phosphotransferase AphA1-IAB, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Minasov, G, Egorova, O, Di Leo, R, Shakya, T, Spanogiannopoulos, P, Todorovic, N, Capretta, A, Wright, G.D, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-11
Release date:2012-09-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance.
Biochem.J., 454, 2013

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