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PDB: 26 件
1MCP
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PHOSPHOCHOLINE BINDING IMMUNOGLOBULIN FAB MC/PC603. AN X-RAY DIFFRACTION STUDY AT 2.7 ANGSTROMS
分子名称: IGA-KAPPA MCPC603 FAB (HEAVY CHAIN), IGA-KAPPA MCPC603 FAB (LIGHT CHAIN), SULFATE ION
著者Satow, Y, Cohen, G.H, Padlan, E.A, Davies, D.R.
登録日1984-07-09
公開日1985-01-02
最終更新日2023-07-26
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A.
J.Mol.Biol., 190, 1986
1EHL
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64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T
分子名称: 5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)
著者Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O.
登録日2000-02-21
公開日2001-02-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation.
J.Mol.Biol., 299, 2000
3M7O
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Crystal structure of mouse MD-1 in complex with phosphatidylcholine
分子名称: (2S)-3-(octadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, ...
著者Harada, H, Ohto, U, Satow, Y.
登録日2010-03-17
公開日2010-06-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of mouse MD-1 with endogenous phospholipid bound in its cavity
J.Mol.Biol., 400, 2010
1NGP
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N1G9 (IGG1-LAMBDA) FAB FRAGMENT COMPLEXED WITH (4-HYDROXY-3-NITROPHENYL) ACETATE
分子名称: 2-(4-HYDROXY-3-NITROPHENYL)ACETIC ACID, N1G9 (IGG1-LAMBDA), SULFATE ION
著者Mizutani, R, Satow, Y.
登録日1995-06-23
公開日1996-07-11
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Three-dimensional structures of the Fab fragment of murine N1G9 antibody from the primary immune response and of its complex with (4-hydroxy-3-nitrophenyl)acetate.
J.Mol.Biol., 254, 1995
1NGQ
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N1G9 (IGG1-LAMBDA) FAB FRAGMENT
分子名称: N1G9 (IGG1-LAMBDA), SULFATE ION
著者Mizutani, R, Satow, Y.
登録日1995-06-23
公開日1996-07-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Three-dimensional structures of the Fab fragment of murine N1G9 antibody from the primary immune response and of its complex with (4-hydroxy-3-nitrophenyl)acetate.
J.Mol.Biol., 254, 1995
1AT5
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HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LYSOZYME, ...
著者Noguchi, S, Miyawaki, K, Satow, Y.
登録日1997-08-18
公開日1998-02-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol., 278, 1998
1AT6
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HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSOZYME
著者Noguchi, S, Miyawaki, K, Satow, Y.
登録日1997-08-19
公開日1998-02-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol., 278, 1998
1ITU
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HUMAN RENAL DIPEPTIDASE COMPLEXED WITH CILASTATIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CILASTATIN, RENAL DIPEPTIDASE, ...
著者Nitanai, Y, Satow, Y, Adachi, H, Tsujimoto, M.
登録日2002-02-03
公開日2002-08-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis
J.Mol.Biol., 321, 2002
1ITQ
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HUMAN RENAL DIPEPTIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, RENAL DIPEPTIDASE, ZINC ION
著者Nitanai, Y, Satow, Y, Adachi, H, Tsujimoto, M.
登録日2002-02-02
公開日2002-08-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Human Renal Dipeptidase Involved in beta-Lactam Hydrolysis
J.Mol.Biol., 321, 2002
1UM2
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Crystal Structure of the Vma1-Derived Endonuclease with the Ligated Extein Segment
分子名称: 21-mer from Vacuolar ATP synthase catalytic subunit A, ENDONUCLEASE PI-SCEI
著者Mizutani, R, Anraku, Y, Satow, Y.
登録日2003-09-22
公開日2004-09-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Protein splicing of yeast VMA1-derived endonuclease via thiazolidine intermediates.
J.Synchrotron Radiat., 11, 2004
3VW3
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Antibody 64M-5 Fab in complex with a double-stranded DNA (6-4) photoproduct
分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), COBALT HEXAMMINE(III), ...
著者Yokoyama, H, Mizutani, R, Satow, Y.
登録日2012-07-30
公開日2013-03-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of a double-stranded DNA (6-4) photoproduct in complex with the 64M-5 antibody Fab
Acta Crystallogr.,Sect.D, 69, 2013
1KEG
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Antibody 64M-2 Fab complexed with dTT(6-4)TT
分子名称: 5'-D(*TP*(64T)P*TP*T)-3', Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain), ...
著者Yokoyama, H, Mizutani, R, Satow, Y, Sato, K, Komatsu, Y, Ohtsuka, E, Nikaido, O.
登録日2001-11-15
公開日2002-11-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides.
Acta Crystallogr.,Sect.D, 68, 2012
1JVA
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CRYSTAL STRUCTURE OF THE VMA1-DERIVED ENDONUCLEASE BEARING THE N AND C EXTEIN PROPEPTIDES
分子名称: VMA1-DERIVED HOMING ENDONUCLEASE X10SSS
著者Mizutani, R, Satow, Y.
登録日2001-08-29
公開日2002-08-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Protein-splicing reaction via a thiazolidine intermediate: crystal structure of the VMA1-derived endonuclease bearing the N and C-terminal propeptides.
J.Mol.Biol., 316, 2002
2E59
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Crystal structure of human MD-2 in complex with lipid IVa
分子名称: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranose, ...
著者Ohto, U, Satow, Y.
登録日2006-12-19
公開日2007-06-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa
Science, 316, 2007
2E56
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Crystal structure of human MD-2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphocyte antigen 96, MYRISTIC ACID
著者Ohto, U, Satow, Y.
登録日2006-12-19
公開日2007-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of human MD-2 and its complex with antiendotoxic lipid IVa.
Science, 316, 2007
1A0F
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CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID
分子名称: GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID
著者Nishida, M, Harada, S, Noguchi, S, Inoue, H, Takahashi, K, Satow, Y.
登録日1997-11-29
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106.
J.Mol.Biol., 281, 1998
3W67
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Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(3,4)-bisphosphate
分子名称: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate, Alpha-tocopherol transfer protein
著者Ohto, U, Satow, Y.
登録日2013-02-11
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3W68
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Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate
分子名称: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, ...
著者Ohto, U, Satow, Y.
登録日2013-02-11
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3AK8
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Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
分子名称: DNA protection during starvation protein, MAGNESIUM ION, SULFATE ION
著者Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
3AK9
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Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis, FE-soaked form
分子名称: DNA protection during starvation protein, FE (II) ION, MAGNESIUM ION, ...
著者Miyamoto, T, Asahina, Y, Miyazaki, S, Shimizu, H, Ohto, U, Noguchi, S, Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
1RTU
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USTILAGO SPHAEROGENA RIBONUCLEASE U2
分子名称: RIBONUCLEASE U2, SULFATE ION
著者Noguchi, S, Satow, Y, Uchida, T, Sasaki, C, Matsuzaki, T.
登録日1995-05-12
公開日1996-11-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution.
Biochemistry, 34, 1995
1UJ3
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Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor
分子名称: IgG Fab heavy chain, IgG Fab light chain, tissue factor
著者Ohto, U, Mizutani, R, Nakamura, M, Adachi, H, Satow, Y.
登録日2003-07-25
公開日2004-07-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor.
J.Synchrotron Radiat., 11, 2004
1RNH
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STRUCTURE OF RIBONUCLEASE H PHASED AT 2 ANGSTROMS RESOLUTION BY MAD ANALYSIS OF THE SELENOMETHIONYL PROTEIN
分子名称: RIBONUCLEASE HI, SULFATE ION
著者Yang, W, Hendrickson, W.A, Crouch, R.J, Satow, Y.
登録日1990-07-11
公開日1991-10-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of ribonuclease H phased at 2 A resolution by MAD analysis of the selenomethionyl protein.
Science, 249, 1990
3AGY
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Crystal structure of human Hsp40 Hdj1 peptide-binding domain complexed with a C-terminal peptide of Hsp70
分子名称: DnaJ homolog subfamily B member 1, peptide of Heat shock cognate 71 kDa protein
著者Suzuki, H, Noguchi, S, Satow, Y.
登録日2010-04-12
公開日2011-02-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70
Biochemistry, 49, 2010
3AGX
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Crystal structure of human Hsp40 Hdj1 peptide-binding domain
分子名称: DnaJ homolog subfamily B member 1
著者Suzuki, H, Noguchi, S, Satow, Y.
登録日2010-04-12
公開日2011-02-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70
Biochemistry, 49, 2010

 

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