1KEG

Antibody 64M-2 Fab complexed with dTT(6-4)TT

Summary for 1KEG

Related1EHL
Descriptor5'-D(*TP*(64T)P*TP*T)-3', Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain), Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain), ... (5 entities in total)
Functional Keywordsprotein-dna complex, dna photoproduct, immunoglobulin, immune system-dna complex, immune system/dna
Biological sourceMus musculus (mouse)
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Total number of polymer chains3
Total molecular weight48690.4
Authors
Yokoyama, H.,Mizutani, R.,Satow, Y.,Sato, K.,Komatsu, Y.,Ohtsuka, E.,Nikaido, O. (deposition date: 2001-11-15, release date: 2002-11-15, Last modification date: 2012-03-28)
Primary citation
Yokoyama, H.,Mizutani, R.,Satow, Y.,Sato, K.,Komatsu, Y.,Ohtsuka, E.,Nikaido, O.
Structure of the DNA (6-4) photoproduct dTT(6-4)TT in complex with the 64M-2 antibody Fab fragment implies increased antibody-binding affinity by the flanking nucleotides.
Acta Crystallogr.,Sect.D, 68:232-238, 2012
PubMed: 22349224 (PDB entries with the same primary citation)
DOI: 10.1107/S0907444912000327
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.19780.5%1.6%0MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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