Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2547 件

4X7X
DownloadVisualize
BU of 4x7x by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH and macrocin
分子名称: 2-[(4R,5S,6S,7R,9R,11E,13E,15R,16R)-6-[(2R,3R,4R,5S,6R)-4-(dimethylamino)-5-[(2S,4R,5S,6S)-4,6-dimethyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-3-oxidanyl-oxan-2-yl]oxy-16-ethyl-15-[[(2R,3R,4R,5S,6R)-3-methoxy-6-methyl-4,5-bis(oxidanyl)oxan-2-yl]oxymethyl]-5,9,13-trimethyl-4-oxidanyl-2,10-bis(oxidanylidene)-1-oxacyclohexadeca-11,13-dien-7-yl]ethanal, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
3LAC
DownloadVisualize
BU of 3lac by Molmil
Crystal structure of Bacillus anthracis pyrrolidone-carboxylate peptidase, pcP
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, Pyrrolidone-carboxylate peptidase
著者Anderson, S.M, Wawrzak, Z, Onopriyenko, O, Hasseman, J, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-01-06
公開日2010-01-19
最終更新日2011-12-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Bacillus anthracis pyrrolidone-carboxylate peptidase, pcP
To be Published
4WOR
DownloadVisualize
BU of 4wor by Molmil
Staphylococcal nuclease in complex with Ca2+ and thymidine-3'-5'-diphosphate (pdTp) at room temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Wall, M.E, Ealick, S.E, Gruner, S.M.
登録日2014-10-16
公開日2014-10-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.596 Å)
主引用文献Three-dimensional diffuse x-ray scattering from crystals of Staphylococcal nuclease.
Proc. Natl. Acad. Sci. U.S.A., 1997
5IOT
DownloadVisualize
BU of 5iot by Molmil
Flavin-dependent thymidylate synthase R174A variant in complex with FAD and dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase ThyX
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
2AU6
DownloadVisualize
BU of 2au6 by Molmil
Crystal structure of catalytic intermediate of inorganic pyrophosphatase
分子名称: CHLORIDE ION, FLUORIDE ION, Inorganic pyrophosphatase, ...
著者Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D.
登録日2005-08-27
公開日2006-08-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies
J.Mol.Biol., 366, 2007
4TVX
DownloadVisualize
BU of 4tvx by Molmil
Crystal structure of the E. coli CRISPR RNA-guided surveillance complex, Cascade
分子名称: CRISPR system Cascade subunit CasA, CRISPR system Cascade subunit CasB, CRISPR system Cascade subunit CasC, ...
著者Jackson, R.N, Golden, S.M, Carter, J, Wiedenheft, B.
登録日2014-06-28
公開日2014-08-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.
Science, 345, 2014
4X7Y
DownloadVisualize
BU of 4x7y by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, M56A, E139A variant) in complex with Mg and SAH
分子名称: MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
3LU2
DownloadVisualize
BU of 3lu2 by Molmil
Structure of lmo2462, a Listeria monocytogenes amidohydrolase family putative dipeptidase
分子名称: Lmo2462 protein, ZINC ION
著者Anderson, S.M, Wawrzak, Z, Onopriyenko, O, Hasseman, J, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-02-16
公開日2010-03-09
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of lmo2462, a Listeria monocytogenes amidohydrolase family putative dipeptidase
To be Published
4OYQ
DownloadVisualize
BU of 4oyq by Molmil
(6-isothiocyanatohexyl)benzene inhibitor complexed with Macrophage Migration Inhibitory Factor
分子名称: 6-isothiocyanatohexylbenzene, GLYCEROL, Macrophage migration inhibitory factor, ...
著者Spencer, E.S, Dale, E.J, Gommans, A.L, Vo, C.T, Rutledge, M.T, Nakatani, Y, Gamble, A.B, Smith, R.A.J, Wilbanks, S.M, Hampton, M.B, Tyndall, J.D.A.
登録日2014-02-12
公開日2014-03-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献To be published
To be published
3FF1
DownloadVisualize
BU of 3ff1 by Molmil
Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus
分子名称: GLUCOSE-6-PHOSPHATE, Glucose-6-phosphate isomerase, SODIUM ION
著者Anderson, S.M, Brunzelle, J.S, Onopriyenko, O, Peterson, S, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-12-01
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus
TO BE PUBLISHED
4OSF
DownloadVisualize
BU of 4osf by Molmil
4-(2-isothiocyanatoethyl)phenol inhibitor complexed with Macrophage Migration Inhibitory Factor
分子名称: CHLORIDE ION, ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, ...
著者Spencer, E.S, Dale, E.J, Gommans, A.L, Vo, C.T, Rutledge, M.T, Nakatani, Y, Gamble, A.B, Smith, R.A.J, Wilbanks, S.M, Hampton, M.B, Tyndall, J.D.A.
登録日2014-02-12
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor
Eur.J.Med.Chem., 93, 2015
2EPE
DownloadVisualize
BU of 2epe by Molmil
Crystal structure analysis of Hen egg white lysozyme grown by capillary method
分子名称: Lysozyme C
著者Naresh, M.D, Subramanian, V, Jaimohan, S.M, Rajaram, A, Arumugam, V, Usha, R, Mandal, A.B.
登録日2007-03-29
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure analysis of Hen egg white lysozyme grown by capillary method
To be published
4UBH
DownloadVisualize
BU of 4ubh by Molmil
Resting state of rat cysteine dioxygenase Y157F variant
分子名称: CHLORIDE ION, Cysteine dioxygenase type 1, FE (II) ION, ...
著者Tchesnokov, E.P, Fellner, M, Jameson, G.N.L, Wilbanks, S.M.
登録日2014-08-13
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structure of cysteine dioxygenase mutant
To be published
7V04
DownloadVisualize
BU of 7v04 by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 6-bromo-3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxamide
分子名称: 6-bromo-3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxamide, MANGANESE (II) ION, Polymerase acidic protein
著者Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
登録日2022-05-09
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
3FRX
DownloadVisualize
BU of 3frx by Molmil
Crystal Structure of the Yeast Orthologue of RACK1, Asc1.
分子名称: Guanine nucleotide-binding protein subunit beta-like protein, MANGANESE (II) ION
著者Coyle, S.M, Gilbert, W.V, Doudna, J.A.
登録日2009-01-08
公開日2009-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Direct link between RACK1 function and localization at the ribosome in vivo
Mol.Cell.Biol., 29, 2009
5IOQ
DownloadVisualize
BU of 5ioq by Molmil
Flavin-dependent thymidylate synthase in complex with FAD and deoxyuridine
分子名称: 2'-DEOXYURIDINE, FLAVIN-ADENINE DINUCLEOTIDE, TRIETHYLENE GLYCOL, ...
著者Bernard, S.M, Stull, F.W, Smith, J.L.
登録日2016-03-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Deprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Biochemistry, 55, 2016
8T5Z
DownloadVisualize
BU of 8t5z by Molmil
Influenza PA-N Endonuclease (amino acids 52-74 truncation)
分子名称: MANGANESE (II) ION, Polymerase acidic protein
著者Kohlbrand, A.J, Cohen, S.M.
登録日2023-06-14
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural Studies of Inhibitors with Clinically Relevant Influenza Endonuclease Variants.
Biochemistry, 63, 2024
8T94
DownloadVisualize
BU of 8t94 by Molmil
Influenza PAN endonuclease with 6-(4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl)-3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid
分子名称: (6M)-3-hydroxy-4-oxo-6-[(4M)-4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]-1,4-dihydropyridine-2-carboxylic acid, MANGANESE (II) ION, Polymerase acidic protein
著者Kohlbrand, A.J, Cohen, S.M.
登録日2023-06-23
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural Studies of Inhibitors with Clinically Relevant Influenza Endonuclease Variants.
Biochemistry, 63, 2024
3FV7
DownloadVisualize
BU of 3fv7 by Molmil
OXA-24 beta-lactamase complex with SA4-44 inhibitor
分子名称: (2S)-2-[[2-methanoyl-7-(methoxycarbonylamino)indolizin-3-yl]amino]-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24
著者Bou, G, Santillana, E, Sheri, A, Beceiro, A, Sampson, J.M, Kalp, M, Bethel, C.R, Distler, A.M, Drawz, S.M, Pagadala, S.R, Van den Akker, F, Bonomo, R.A, Romero, A, Buynak, J.D.
登録日2009-01-15
公開日2010-02-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
4X7V
DownloadVisualize
BU of 4x7v by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH and mycinamicin IV (product)
分子名称: MAGNESIUM ION, MYCINAMICIN IV, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
3LXE
DownloadVisualize
BU of 3lxe by Molmil
Human Carbonic Anhydrase I in complex with topiramate
分子名称: Carbonic anhydrase 1, ZINC ION, [(3aS,5aR,8aR,8bS)-2,2,7,7-tetramethyltetrahydro-3aH-bis[1,3]dioxolo[4,5-b:4',5'-d]pyran-3a-yl]methyl sulfamate
著者Alterio, V, De Simone, G, Monti, S.M, Truppo, E.
登録日2010-02-25
公開日2010-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The first example of a significant active site conformational rearrangement in a carbonic anhydrase-inhibitor adduct: the carbonic anhydrase I-topiramate complex.
Org.Biomol.Chem., 2010
2C7Y
DownloadVisualize
BU of 2c7y by Molmil
plant enzyme
分子名称: 3-KETOACYL-COA THIOLASE 2
著者Sundaramoorthy, R, Micossi, E, Alphey, M.S, Germain, V, Bryce, J.H, Smith, S.M, Leonard, G.A, Hunter, W.N.
登録日2005-11-30
公開日2006-05-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of a Plant 3-Ketoacyl-Coa Thiolase Reveals the Potential for Redox Control of Peroxisomal Fatty Acid Beta-Oxidation.
J.Mol.Biol., 359, 2006
3LYL
DownloadVisualize
BU of 3lyl by Molmil
Structure of 3-oxoacyl-acylcarrier protein reductase, FabG from Francisella tularensis
分子名称: 3-oxoacyl-(Acyl-carrier-protein) reductase
著者Anderson, S.M, Wawrzak, Z, Gordon, E, Hasseman, J, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-02-27
公開日2010-03-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of 3-oxoacyl-acylcarrier protein reductase, FabG from Francisella tularensis
TO BE PUBLISHED
4X1V
DownloadVisualize
BU of 4x1v by Molmil
Crystal structure of the 2nd SH3 domain from human CD2AP (CMS) in complex with a proline-rich peptide (aa 76-91) from human ARAP1
分子名称: Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1, CD2-associated protein
著者Rouka, E, Krojer, T, von Delft, F, Knapp, S, Kirsch, K.H, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Feller, S.M, Simister, P.C.
登録日2014-11-25
公開日2016-02-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of the 2nd SH3 domain from human CD2AP (CMS) in complex with a proline-rich peptide (aa 76-91) from human ARAP1
to be published
5I7C
DownloadVisualize
BU of 5i7c by Molmil
Centrosomin-motif 2 (CM2) domain of Drosophila melanogaster Centrosomin (Cnn)
分子名称: Centrosomin, ZINC ION
著者Feng, Z, Cottee, M.A, Johnson, S, Lea, S.M.
登録日2016-02-17
公開日2017-03-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Structural Basis for Mitotic Centrosome Assembly in Flies.
Cell, 169, 2017

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon