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PDB: 2498 results

3SZZ
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Acetate
Descriptor: ACETATE ION, ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
1TUF
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Crystal structure of Diaminopimelate Decarboxylase from m. jannaschi
Descriptor: AZELAIC ACID, Diaminopimelate decarboxylase
Authors:Rajashankar, K, Ray, S.R, Bonanno, J.B, Pinho, M.G, He, G, De Lencastre, H, Tomasz, A, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-24
Release date:2004-07-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cocrystal structures of diaminopimelate decarboxylase: mechanism, evolution, and inhibition of an antibiotic resistance accessory factor
Structure, 10, 2002
3T00
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate
Descriptor: NICKEL (II) ION, VANADATE ION, ZINC ION, ...
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3TBC
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Small laccase from Streptomyces viridosporus T7A; alternate crystal form complexed with acetovanillone.
Descriptor: 1-(4-hydroxy-3-methoxyphenyl)ethanone, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
5BKD
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Crystal structure of AAD-1 in complex with (R)-cyhalofop, Mn(II), and 2-oxoglutarate
Descriptor: (2R)-2-[4-(4-cyano-2-fluorophenoxy)phenoxy]propanoic acid, (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase, 2-OXOGLUTARIC ACID, ...
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2019-06-02
Release date:2019-06-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.
Proc.Natl.Acad.Sci.USA, 116, 2019
6G6Y
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Eg5-inhibitor complex
Descriptor: (~{N}~{Z})-~{N}-[(5~{S})-4-ethanoyl-5-methyl-5-phenyl-1,3,4-thiadiazolidin-2-ylidene]ethanamide, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
Authors:Talapatra, S.K, Kozielski, F, Tham, C.L.
Deposit date:2018-04-03
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Eg5 - K858 complex and implications for structure-based design of thiadiazole-containing inhibitors.
Eur J Med Chem, 156, 2018
1TK9
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Crystal Structure of Phosphoheptose isomerase 1
Descriptor: Phosphoheptose isomerase 1
Authors:Rajashankar, K.R, Solorzano, V, Kniewel, R, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-08
Release date:2004-06-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of two putative phosphoheptose isomerases.
Proteins, 63, 2006
1XU1
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The crystal structure of APRIL bound to TACI
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 13B
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
3ZCW
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Eg5 - New allosteric binding site
Descriptor: (2E)-2-(3-fluoranyl-4-methoxy-phenyl)imino-1-[[2-(trifluoromethyl)phenyl]methyl]-3H-benzimidazole-5-carboxylic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Ulaganathan, V, Talapatra, S.K, Kozielski, F, Pannifer, A.D.
Deposit date:2012-11-23
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.691 Å)
Cite:Structural Insights Into a Unique Inhibitor Binding Pocket in Kinesin Spindle Protein.
J.Am.Chem.Soc., 135, 2013
1SZE
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L230A mutant flavocytochrome b2 with benzoylformate
Descriptor: BENZOYL-FORMIC ACID, Cytochrome b2, mitochondrial, ...
Authors:Mowat, C.G, Wehenkel, A, Green, A.J, Walkinshaw, M.D, Reid, G.A, Chapman, S.K.
Deposit date:2004-04-05
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Altered Substrate Specificity in Flavocytochrome b(2): Structural Insights into the Mechanism of l-Lactate Dehydrogenation
Biochemistry, 43, 2004
6G6Z
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Eg5-inhibitor complex
Descriptor: (~{N}~{Z})-~{N}-[(5~{S})-4-ethanoyl-5-methyl-5-phenyl-1,3,4-thiadiazolidin-2-ylidene]ethanamide, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
Authors:Talapatra, S.K, Kozielski, F, Tham, C.L.
Deposit date:2018-04-04
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the Eg5 - K858 complex and implications for structure-based design of thiadiazole-containing inhibitors.
Eur J Med Chem, 156, 2018
1XLY
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X-RAY STRUCTURE OF THE RNA-BINDING PROTEIN SHE2p
Descriptor: SHE2p
Authors:Niessing, D, Huettelmaier, S, Zenklusen, D, Singer, R.H, Burley, S.K.
Deposit date:2004-09-30
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:She2p is a novel RNA binding protein with a basic helical hairpin motif
Cell(Cambridge,Mass.), 119, 2004
3SMD
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Crystal structure of a mut/nudix family protein from bacillus thuringiensis
Descriptor: MutT/NUDIX family protein
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-06-27
Release date:2011-07-20
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a mut/nudix family protein from bacillus thuringiensis
To be Published
3SN4
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Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bonanno, J.B, Patskovsky, Y, Toro, R, Dickey, M, Bain, K.T, Wu, B, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-06-28
Release date:2011-07-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 bound to magnesium and alpha-ketoglutarate
To be Published
1YDB
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STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Nair, S.K, Christianson, D.W.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of inhibitor affinity to variants of human carbonic anhydrase II.
Biochemistry, 34, 1995
1T4J
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Allosteric Inhibition of Protein Tyrosine Phosphatase 1B
Descriptor: 3-(3,5-DIBROMO-4-HYDROXY-BENZOYL)-2-ETHYL-BENZOFURAN-6-SULFONIC ACID [4-(THIAZOL-2-YLSULFAMOYL)-PHENYL]-AMIDE, Protein-tyrosine phosphatase, non-receptor type 1
Authors:Wiesmann, C, Barr, K.J, Kung, J, Zhu, J, Shen, W, Fahr, B.J, Zhong, M, Taylor, L, Randal, M, McDowell, R.S, Hansen, S.K.
Deposit date:2004-04-29
Release date:2004-07-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Allosteric inhibition of protein tyrosine phosphatase 1B
Nat.Struct.Mol.Biol., 11, 2004
1QN7
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Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.
Descriptor: DNA (5'-D(*GP*CP*TP*AP*TP*AP*TP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*AP*TP*AP*TP*AP*GP*C)-3'), TRANSCRIPTION INITIATION FACTOR TFIID-1
Authors:Patikoglou, G.A, Kim, J.L, Sun, L, Yang, S.-H, Kodadek, T, Burley, S.K.
Deposit date:1999-10-14
Release date:2000-02-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:TATA Element Recognition by the TATA Box-Binding Protein Has Been Conserved Throughout Evolution
Genes Dev., 13, 1999
2F2K
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Aldose reductase tertiary complex with NADPH and DEG
Descriptor: Aldose reductase, GAMMA-GLUTAMYL-S-(1,2-DICARBOXYETHYL)CYSTEINYLGLYCINE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Singh, R, White, M.A, Ramana, K.V, Petrash, J.M, Watowich, S.J, Bhatnagar, A, Srivastava, S.K.
Deposit date:2005-11-17
Release date:2006-05-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of a glutathione conjugate bound to the active site of aldose reductase.
Proteins, 64, 2006
1R0Z
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Phosphorylated Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ATP
Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, ...
Authors:Lewis, H.A, Buchanan, S.G, Burley, S.K, Conners, K, Dickey, M, Dorwart, M, Fowler, R, Gao, X, Guggino, W.B, Hendrickson, W.A.
Deposit date:2003-09-23
Release date:2003-12-09
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of nucleotide-binding domain 1 of the cystic fibrosis transmembrane conductance regulator.
Embo J., 23, 2004
3T9W
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Small laccase from Amycolatopsis sp. ATCC 39116
Descriptor: COPPER (II) ION, HYDROGEN PEROXIDE, NICKEL (II) ION, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3T81
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Crystal Structure of diiron adenine deaminase
Descriptor: Adenine deaminase 2, FE (III) ION
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-08-01
Release date:2011-11-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structure of diiron adenine deaminase
TO BE PUBLISHED
3TAS
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Small laccase from Streptomyces viridosporus T7A
Descriptor: ACETATE ION, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-04
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
1QJD
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Flavocytochrome C3 from Shewanella frigidimarina
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FLAVOCYTOCHROME C3, GLYCEROL, ...
Authors:Taylor, P, Pealing, S.L, Reid, G.A, Chapman, S.K, Walkinshaw, M.D.
Deposit date:1999-06-23
Release date:1999-11-21
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Mapping of a Unique Fumarate Reductase
Nat.Struct.Biol., 6, 1999
6FMQ
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Keap1 - peptide complex
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ACY-SC1-GLU-THR-GLY-GLU-LEU, ...
Authors:Talapatra, S.K, Kozielski, F, Wells, G, Georgakopoulos, N.D.
Deposit date:2018-02-02
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Modified Peptide Inhibitors of the Keap1-Nrf2 Protein-Protein Interaction Incorporating Unnatural Amino Acids.
Chembiochem, 19, 2018
1YDA
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STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Nair, S.K, Christianson, D.W.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of inhibitor affinity to variants of human carbonic anhydrase II.
Biochemistry, 34, 1995

224004

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