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PDB: 43 件

5L4R
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X-ray structure of the adduct between thaumatin and cisplatin
分子名称: Cisplatin, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Russo Krauss, I, Ferraro, G, Merlino, A.
登録日2016-05-26
公開日2016-12-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Cisplatin-Protein Interactions: Unexpected Drug Binding to N-Terminal Amine and Lysine Side Chains.
Inorg.Chem., 55, 2016
4DII
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X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
登録日2012-01-31
公開日2012-07-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity.
Nucleic Acids Res., 40, 2012
4DIH
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X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of sodium ions
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
登録日2012-01-31
公開日2012-07-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity.
Nucleic Acids Res., 40, 2012
3QLP
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X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, ...
著者Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
登録日2011-02-03
公開日2011-10-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Thrombin-aptamer recognition: a revealed ambiguity.
Nucleic Acids Res., 39, 2011
5F9X
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X-RAY STRUCTURE OF THE ADDUCT BETWEEN HEN EGG WHITE LYSOZYME AND CISPLATIN UPON 24 HOURS OF INCUBATION AT 55 DEGREES
分子名称: Cisplatin, GLYCEROL, Lysozyme C
著者Russo Krauss, I, Ferraro, G, Pica, A, Merlino, A.
登録日2015-12-10
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.
J.Biol.Inorg.Chem., 21, 2016
4YIP
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BU of 4yip by Molmil
X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus mutans
分子名称: FE (III) ION, Superoxide dismutase [Mn/Fe]
著者Russo Krauss, I, Merlino, A, Pica, A, Sica, F.
登録日2015-03-02
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Fine tuning of metal-specific activity in the Mn-like group of cambialistic superoxide dismutases
Rsc Adv, 5, 2015
4YIO
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X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus
分子名称: FE (III) ION, GLYCEROL, SULFATE ION, ...
著者Russo Krauss, I, Merlino, A, Pica, A, Sica, F.
登録日2015-03-02
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fine tuning of metal-specific activity in the Mn-like group of cambialistic superoxide dismutases
Rsc Adv, 5, 2015
5F9U
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X-RAY STRUCTURE OF THE ADDUCT BETWEEN HEN EGG WHITE LYSOZYME AND CISPLATIN UPON 24 HOURS OF INCUBATION AT 20 DEGREES
分子名称: Cisplatin, GLYCEROL, Lysozyme C
著者Russo Krauss, I, Ferraro, G, Pica, A, Merlino, A.
登録日2015-12-10
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.
J.Biol.Inorg.Chem., 21, 2016
5FCP
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X-RAY STRUCTURE OF THE ADDUCT BETWEEN HEN EGG WHITE LYSOZYME AND CISPLATIN AT LONG INCUBATION TIMES
分子名称: CHLORIDE ION, Cisplatin, GLYCEROL, ...
著者Russo Krauss, I, Ferraro, G, Pica, A, Merlino, A.
登録日2015-12-15
公開日2016-04-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Effect of temperature on the interaction of cisplatin with the model protein hen egg white lysozyme.
J.Biol.Inorg.Chem., 21, 2016
4MXF
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BU of 4mxf by Molmil
X-ray structure of the adduct between bovine pancreatic ribonuclease and Auoxo6, a dinuclear gold(III) complex with -dioxo bridges linking the two metal centers
分子名称: GOLD ION, Ribonuclease pancreatic
著者Russo Krauss, I, Vergara, A, Merlino, A.
登録日2013-09-26
公開日2013-12-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Interactions of gold-based drugs with proteins: crystal structure of the adduct formed between ribonuclease A and a cytotoxic gold(iii) compound.
Metallomics, 6, 2014
4QH3
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BU of 4qh3 by Molmil
X-ray structure of the adduct formed between bovine pancreatic ribonuclease and trans-dimethylamine methylamine dichlorido platinum(II)
分子名称: Ribonuclease pancreatic, bis(chloranyl)-(dimethylamino)-(methylamino)platinum
著者Russo Krauss, I, Merlino, A.
登録日2014-05-26
公開日2014-07-30
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interactions between Anticancer trans-Platinum Compounds and Proteins: Crystal Structures and ESI-MS Spectra of Two Protein Adducts of trans-(Dimethylamino)(methylamino)dichloridoplatinum(II).
Inorg.Chem., 53, 2014
4QY9
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BU of 4qy9 by Molmil
X-ray structure of the adduct between hen egg white lysozyme and Auoxo3, a cytotoxic gold(III) compound
分子名称: 1,2-ETHANEDIOL, GOLD ION, Lysozyme C, ...
著者Russo Krauss, I, Merlino, A.
登録日2014-07-24
公開日2014-11-05
最終更新日2014-11-19
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Interactions of gold-based drugs with proteins: the structure and stability of the adduct formed in the reaction between lysozyme and the cytotoxic gold(iii) compound Auoxo3.
Dalton Trans, 43, 2014
4RTE
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BU of 4rte by Molmil
The X-ray structure of bovine pancreatic ribonuclease incubated in the presence of an excess of cisplatin (1:10 ratio)
分子名称: CHLORIDE ION, Cisplatin, Ribonuclease pancreatic
著者Russo Krauss, I, Merlino, A.
登録日2014-11-14
公開日2015-03-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Platinated oligomers of bovine pancreatic ribonuclease: Structure and stability.
J.Inorg.Biochem., 146, 2015
4QGZ
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BU of 4qgz by Molmil
X-ray structure of the adduct formed between hen egg white lysozyme and trans-dimethylamine methylamine dichlorido platinum(II)
分子名称: Lysozyme C, bis(chloranyl)-(dimethylamino)-(methylamino)platinum
著者Russo Krauss, I, Merlino, A.
登録日2014-05-26
公開日2014-07-30
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Interactions between Anticancer trans-Platinum Compounds and Proteins: Crystal Structures and ESI-MS Spectra of Two Protein Adducts of trans-(Dimethylamino)(methylamino)dichloridoplatinum(II).
Inorg.Chem., 53, 2014
5DWW
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BU of 5dww by Molmil
Structural Insights into the Quadruplex-Duplex 3' Interface formed from a Telomeric Repeat - TTLOOP
分子名称: DNA (25-MER), DNA (5'-D(*TP*AP*AP*CP*GP*CP*TP*A)-3'), POTASSIUM ION
著者Russo Krauss, I, Parkinson, G.N.
登録日2015-09-23
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural Insights into the Quadruplex-Duplex 3' Interface Formed from a Telomeric Repeat: A Potential Molecular Target.
J.Am.Chem.Soc., 138, 2016
5CMX
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BU of 5cmx by Molmil
X-ray structure of the complex between human alpha thrombin and a duplex/quadruplex 31-mer DNA aptamer
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, RE31, ...
著者Russo Krauss, I, Pica, A, Napolitano, V, Sica, F.
登録日2015-07-17
公開日2016-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Different duplex/quadruplex junctions determine the properties of anti-thrombin aptamers with mixed folding.
Nucleic Acids Res., 44, 2016
3LN8
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The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3
分子名称: HYDROLASE, SULFATE ION
著者Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
登録日2010-02-02
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
3LJD
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The X-ray structure of zebrafish RNase1 from a new crystal form at pH 4.5
分子名称: ACETATE ION, SULFATE ION, Zebrafish RNase1
著者Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
登録日2010-01-26
公開日2010-12-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
3LJE
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BU of 3lje by Molmil
The X-ray structure of zebrafish RNase5
分子名称: ACETATE ION, SULFATE ION, Zebrafish RNase5
著者Russo Krauss, I, Merlino, A, Coscia, F, Mazzarella, L, Sica, F.
登録日2010-01-26
公開日2010-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
4L2C
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BU of 4l2c by Molmil
X-ray structure of the C57R mutant of the iron superoxide dismutase from Pseudoalteromonas haloplanktis (crystal form I)
分子名称: FE (III) ION, Superoxide dismutase [Fe], alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Russo Krauss, I, Merlino, A, Sica, F.
登録日2013-06-04
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural and denaturation studies of two mutants of a cold adapted superoxide dismutase point to the importance of electrostatic interactions in protein stability.
Biochim.Biophys.Acta, 1844, 2014
4L2D
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BU of 4l2d by Molmil
X-ray structure of the Fe(II) form of the iron superoxide dismutase from Pseudoalteromonas haloplanktis
分子名称: FE (II) ION, Superoxide dismutase [Fe], alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Russo Krauss, I, Merlino, A, Sica, F.
登録日2013-06-04
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural and denaturation studies of two mutants of a cold adapted superoxide dismutase point to the importance of electrostatic interactions in protein stability.
Biochim.Biophys.Acta, 1844, 2014
4L0A
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BU of 4l0a by Molmil
X-ray structure of an all LNA quadruplex
分子名称: DNA/RNA (5'-R(*(TLN)P*(LCG)P*(LCG)P*(LCG)P*(TLN))-3'), GLYCEROL, POTASSIUM ION
著者Russo Krauss, I, Parkinson, G, Merlino, A, Mazzarella, L, Sica, F.
登録日2013-05-31
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A regular thymine tetrad and a peculiar supramolecular assembly in the first crystal structure of an all-LNA G-quadruplex.
Acta Crystallogr.,Sect.D, 70, 2014
6EVV
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BU of 6evv by Molmil
X-ray structure of the complex between human alpha thrombin and NU172, a duplex/quadruplex 26-mer DNA aptamer, in the presence of potassium ions.
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Troisi, R, Russo Krauss, I, Sica, F.
登録日2017-11-02
公開日2018-10-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Several structural motifs cooperate in determining the highly effective anti-thrombin activity of NU172 aptamer.
Nucleic Acids Res., 46, 2018
4LZ4
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X-ray structure of the complex between human thrombin and the TBA deletion mutant lacking thymine 3 nucleobase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, ...
著者Pica, A, Russo Krauss, I, Merlino, A, Sica, F.
登録日2013-07-31
公開日2014-01-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer.
Febs J., 280, 2013
4LZ1
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X-ray structure of the complex between human thrombin and the TBA deletion mutant lacking thymine 12 nucleobase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, POTASSIUM ION, ...
著者Pica, A, Russo Krauss, I, Merlino, A, Sica, F.
登録日2013-07-31
公開日2014-01-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer.
Febs J., 280, 2013

 

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