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PDB: 32 件

6CB8
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Cryo-EM structure of the Gasdermin A3 membrane pore
分子名称: CARDIOLIPIN, Gasdermin-A3
著者Ruan, J, Wu, H.
登録日2018-02-02
公開日2018-04-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of the gasdermin A3 membrane pore.
Nature, 557, 2018
4DQN
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Crystal structure of the branched-chain aminotransferase from Streptococcus mutans
分子名称: Putative branched-chain amino acid aminotransferase IlvE
著者Ruan, J, Li, S.T.
登録日2012-02-16
公開日2013-01-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structure of the branched-chain aminotransferase from Streptococcus mutans
Acta Crystallogr.,Sect.D, 68, 2012
5BXI
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1.7 Angstrom Resolution Crystal Structure of Putative Nucleoside Diphosphate Kinase from Toxoplasma gondii with Tyrosine of Tag Bound to Active Site
分子名称: BICARBONATE ION, DI(HYDROXYETHYL)ETHER, Nucleoside diphosphate kinase
著者Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-06-09
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
8EFP
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CryoEM structure of GSDMB in complex with shigella IpaH7.8
分子名称: Gasdermin-B, Probable E3 ubiquitin-protein ligase ipaH7.8
著者Wang, C, Ruan, J.
登録日2022-09-08
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for GSDMB pore formation and its targeting by IpaH7.8.
Nature, 616, 2023
8ET1
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CryoEM structure of GSDMB pore without transmembrane beta-barrel
分子名称: Isoform 1 of Gasdermin-B
著者Wang, C, Ruan, J.
登録日2022-10-15
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.48 Å)
主引用文献Structural basis for GSDMB pore formation and its targeting by IpaH7.8.
Nature, 616, 2023
8ET2
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CryoEM structure of the GSDMB pore
分子名称: Isoform 1 of Gasdermin-B
著者Wang, C, Ruan, J.
登録日2022-10-15
公開日2023-03-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.96 Å)
主引用文献Structural basis for GSDMB pore formation and its targeting by IpaH7.8.
Nature, 616, 2023
4IR8
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1.85 Angstrom Crystal Structure of Putative Sedoheptulose-1,7 bisphosphatase from Toxoplasma gondii
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, Sedoheptulose-1,7 bisphosphatase, ...
著者Minasov, G, Ruan, J, Wawrzak, Z, Halavaty, A, Shuvalova, L, Harb, O.S, Ngo, H, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-01-14
公開日2013-01-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献1.85 Angstrom Crystal Structure of Putative Sedoheptulose-1,7 bisphosphatase from Toxoplasma gondii.
TO BE PUBLISHED
3R93
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Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
分子名称: H3K9Me3 peptide, M-phase phosphoprotein 8, UNKNOWN ATOM OR ION
著者Li, J, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2011-03-24
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.057 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
6VFE
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Gasdermin D pore
分子名称: Gasdermin-D, N-terminal
著者Xia, S, Ruan, J, Wu, H.
登録日2020-01-03
公開日2021-04-21
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Gasdermin D pore structure reveals preferential release of mature interleukin-1.
Nature, 593, 2021
3T41
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1.95 Angstrom Resolution Crystal Structure of Epidermin Leader Peptide Processing Serine Protease (EpiP) S393A Mutant from Staphylococcus aureus
分子名称: CALCIUM ION, CHLORIDE ION, Epidermin leader peptide processing serine protease EpiP
著者Minasov, G, Kuhn, M, Ruan, J, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-07-25
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献1.95 Angstrom Resolution Crystal Structure of Epidermin Leader Peptide Processing Serine Protease (EpiP) S393A Mutant from Staphylococcus aureus.
TO BE PUBLISHED
7KEU
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Cryo-EM structure of the Caspase-1-CARD:ASC-CARD octamer
分子名称: Apoptosis-associated speck-like protein containing a CARD, Caspase-1
著者Hollingsworth, L.R, David, L, Li, Y, Ruan, J, Wu, H.
登録日2020-10-12
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.
Nat Commun, 12, 2021
3OTR
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2.75 Angstrom Crystal Structure of Enolase 1 from Toxoplasma gondii
分子名称: CHLORIDE ION, Enolase, SULFATE ION
著者Minasov, G, Ruan, J, Shuvalova, L, Halavaty, A, Ngo, H, Tomavo, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-09-13
公開日2010-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The structure of bradyzoite-specific enolase from Toxoplasma gondii reveals insights into its dual cytoplasmic and nuclear functions.
Acta Crystallogr.,Sect.D, 71, 2015
3MP1
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Complex structure of Sgf29 and trimethylated H3K4
分子名称: ACETATE ION, H3K4me3 peptide, Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29, ...
著者Li, J, Ruan, J, Wu, M, Xue, X, Zang, J.
登録日2010-04-24
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation
Embo J., 30, 2011
3MP6
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Complex Structure of Sgf29 and dimethylated H3K4
分子名称: H3K4me2 peptide, Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, J, Wu, M, Ruan, J, Zang, J.
登録日2010-04-25
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation
Embo J., 30, 2011
3QYQ
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1.8 Angstrom resolution crystal structure of a putative deoxyribose-phosphate aldolase from Toxoplasma gondii ME49
分子名称: Deoxyribose-phosphate aldolase, putative, SULFATE ION, ...
著者Halavaty, A.S, Ruan, J, Minasov, G, Shuvalova, L, Ueno, A, Igarashi, M, Ngo, H, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-03
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional divergence of the aldolase fold in Toxoplasma gondii.
J.Mol.Biol., 427, 2015
3MP8
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Crystal structure of Sgf29 tudor domain
分子名称: 4-(HYDROXYMETHYL)BENZAMIDINE, ACETIC ACID, GLYCEROL, ...
著者Li, J, Wu, M, Ruan, J, Zang, J.
登録日2010-04-26
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation
Embo J., 30, 2011
3LWE
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BU of 3lwe by Molmil
The crystal structure of MPP8
分子名称: M-phase phosphoprotein 8
著者Li, Z, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2010-02-23
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
4FBD
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2.35 Angstrom Crystal Structure of Conserved Hypothetical Protein from Toxoplasma gondii ME49.
分子名称: Putative uncharacterized protein
著者Minasov, G, Ruan, J, Wawrzak, Z, Shuvalova, L, Ngo, H, Knoll, L, Milligan-Myhre, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-05-22
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献2.35 Angstrom Crystal Structure of Conserved Hypothetical Protein from Toxoplasma gondii ME49.
TO BE PUBLISHED
3SB1
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Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259
分子名称: GLYCEROL, TRIETHYLENE GLYCOL, hydrogenase expression protein
著者Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Ruan, J, Leo, R.D, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2011-06-03
公開日2011-07-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259
To be Published
4D2J
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Crystal structure of F16BP Aldolase from Toxoplasma gondii (TgALD1)
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, FRUCTOSE-BISPHOSPHATE ALDOLASE, ...
著者Tonkin, M.L, Ramaswamy, R, Halavaty, A.S, Ruan, J, Igarashi, M, Ngo, H.M, Boulanger, M.J.
登録日2014-05-09
公開日2014-10-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and Functional Divergence of the Aldolase Fold in Toxoplasma Gondii.
J.Mol.Biol., 427, 2015
4EIV
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1.37 Angstrom resolution crystal structure of apo-form of a putative deoxyribose-phosphate aldolase from Toxoplasma gondii ME49
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Deoxyribose-phosphate aldolase
著者Halavaty, A.S, Ruan, J, Minasov, G, Shuvalova, L, Ueno, A, Igarashi, M, Ngo, H, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-05
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural and Functional Divergence of the Aldolase Fold in Toxoplasma gondii.
J.Mol.Biol., 427, 2015
5H8O
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Crystal structure of an ASC-binding nanobody in complex with the CARD domain of ASC
分子名称: Apoptosis-associated speck-like protein containing a CARD, VHH nanobody
著者Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L.
登録日2015-12-23
公開日2016-04-06
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (4.206 Å)
主引用文献A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly.
J.Exp.Med., 213, 2016
5H8D
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Crystal structure of an ASC binding nanobody
分子名称: VHH nanobody
著者Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L.
登録日2015-12-23
公開日2016-04-06
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly.
J.Exp.Med., 213, 2016
5I4C
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Crystal structure of non-phosphorylated receiver domain of the stress response regulator RcsB from Escherichia coli
分子名称: Transcriptional regulatory protein RcsB
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Ruan, J, Pshenychnyi, S, Wolfe, A.J, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-02-11
公開日2016-10-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of nonphosphorylated receiver domain of the stress response regulator RcsB from Escherichia coli.
Protein Sci., 25, 2016
3JBL
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Cryo-EM Structure of the Activated NAIP2/NLRC4 Inflammasome Reveals Nucleated Polymerization
分子名称: NLR family CARD domain-containing protein 4
著者Zhang, L, Chen, S, Ruan, J, Wu, J, Tong, A.B, Yin, Q, Li, Y, David, L, Lu, A, Wang, W.L, Marks, C, Ouyang, Q, Zhang, X, Mao, Y, Wu, H.
登録日2015-09-05
公開日2015-10-21
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structure of the activated NAIP2-NLRC4 inflammasome reveals nucleated polymerization.
Science, 350, 2015

 

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