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PDB: 78 results

6NYC
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Munc13-1 C2B-domain, calcium free
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Munc13-1
Authors:Tomchick, D.R, Rizo, J, Machius, M, Lu, J.
Deposit date:2019-02-11
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.893 Å)
Cite:Munc13 C2B domain is an activity-dependent Ca2+ regulator of synaptic exocytosis.
Nat. Struct. Mol. Biol., 17, 2010
2KXV
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NMR structure and calcium-binding properties of the tellurite resistance protein TerD from Klebsiella pneumoniae
Descriptor: CALCIUM ION, Tellurite resistance protein
Authors:Pan, Y.R, Lou, Y.C, Rizo, J, Chen, C.
Deposit date:2010-05-13
Release date:2010-12-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure and Calcium-Binding Properties of the Tellurite Resistance Protein TerD from Klebsiella pneumoniae
J.Mol.Biol., 2010
1BR0
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BU of 1br0 by Molmil
THREE DIMENSIONAL STRUCTURE OF THE N-TERMINAL DOMAIN OF SYNTAXIN 1A
Descriptor: PROTEIN (SYNTAXIN 1-A)
Authors:Fernandez, I, Ubach, J, Dubulova, I, Zhang, X, Sudhof, T.C, Rizo, J.
Deposit date:1998-08-25
Release date:1998-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of an evolutionarily conserved N-terminal domain of syntaxin 1A.
Cell(Cambridge,Mass.), 94, 1998
1BYN
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SOLUTION STRUCTURE OF THE CALCIUM-BOUND FIRST C2-DOMAIN OF SYNAPTOTAGMIN I
Descriptor: CALCIUM ION, PROTEIN (SYNAPTOTAGMIN I)
Authors:Shao, X, Fernandez, I, Sudhof, T.C, Rizo, J.
Deposit date:1998-10-18
Release date:1998-10-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the Ca2+-free and Ca2+-bound C2A domain of synaptotagmin I: does Ca2+ induce a conformational change?
Biochemistry, 37, 1998
2JQQ
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BU of 2jqq by Molmil
Solution structure of Saccharomyces cerevisiae conserved oligomeric Golgi subunit 2 protein (Cog2p)
Descriptor: Conserved oligomeric Golgi complex subunit 2
Authors:Cavanaugh, L.F, Chen, X, Pelczer, I, Rizo, J, Hughson, F.M.
Deposit date:2007-06-06
Release date:2007-06-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural analysis of conserved oligomeric Golgi complex subunit 2
J.Biol.Chem., 282, 2007
1EHS
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THE STRUCTURE OF ESCHERICHIA COLI HEAT-STABLE ENTEROTOXIN B BY NUCLEAR MAGNETIC RESONANCE AND CIRCULAR DICHROISM
Descriptor: HEAT-STABLE ENTEROTOXIN B
Authors:Sukumar, M, Rizo, J, Wall, M, Dreyfus, L.A, Kupersztoch, Y.M, Gierasch, L.M.
Deposit date:1995-06-13
Release date:1995-09-15
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:The structure of Escherichia coli heat-stable enterotoxin b by nuclear magnetic resonance and circular dichroism.
Protein Sci., 4, 1995
2KXT
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NMR structure and calcium-binding properties of the tellurite resistance protein TerD from Klebsiella pneumoniae
Descriptor: Tellurite resistance protein
Authors:Pan, Y.R, Lou, Y.C, Rizo, J, Chen, C.
Deposit date:2010-05-12
Release date:2010-12-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure and Calcium-Binding Properties of the Tellurite Resistance Protein TerD from Klebsiella pneumoniae
J.Mol.Biol., 2010
4NPK
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Extended-Synaptotagmin 2, C2A- and C2B-domains, calcium bound
Descriptor: CALCIUM ION, Extended synaptotagmin-2
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2013-11-21
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.
Structure, 22, 2014
4NPJ
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Extended-Synaptotagmin 2, C2A- and C2B-domains
Descriptor: ACETATE ION, CHLORIDE ION, Extended synaptotagmin-2, ...
Authors:Tomchick, D.R, Rizo, J, Xu, J.
Deposit date:2013-11-21
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.
Structure, 22, 2014
1ZUB
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Solution Structure of the RIM1alpha PDZ Domain in Complex with an ELKS1b C-terminal Peptide
Descriptor: ELKS1b, Regulating synaptic membrane exocytosis protein 1
Authors:Lu, J, Li, H, Wang, Y, Sudhof, T.C, Rizo, J.
Deposit date:2005-05-30
Release date:2005-08-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the RIM1alpha PDZ Domain in Complex with an ELKS1b C-terminal Peptide
J.Mol.Biol., 352, 2005
2A4H
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Solution structure of Sep15 from Drosophila melanogaster
Descriptor: Selenoprotein Sep15
Authors:Ferguson, A.D, Labunskyy, V.M, Fomenko, D.E, Chelliah, Y, Amezcua, C.A, Rizo, J, Gladyshev, V.N, Deisenhofer, J.
Deposit date:2005-06-28
Release date:2005-12-13
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:NMR Structures of the Selenoproteins Sep15 and SelM Reveal Redox Activity of a New Thioredoxin-like Family.
J.Biol.Chem., 281, 2006
2A20
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Solution structure of Rim2 Zinc Finger Domain
Descriptor: Regulating synaptic membrane exocytosis protein 2, ZINC ION
Authors:Dulubova, I, Lou, X, Lu, J, Huryeva, I, Alam, A, Schneggenburger, R, Sudhof, T.C, Rizo, J.
Deposit date:2005-06-21
Release date:2005-08-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A Munc13/RIM/Rab3 tripartite complex: from priming to plasticity?
Embo J., 24, 2005
2A2P
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Solution structure of SelM from Mus musculus
Descriptor: Selenoprotein M
Authors:Ferguson, A.D, Labunskyy, V.M, Fomenko, D.E, Chelliah, Y, Amezcua, C.A, Rizo, J, Gladyshev, V.N, Deisenhofer, J.
Deposit date:2005-06-22
Release date:2005-12-06
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:NMR Structures of the Selenoproteins Sep15 and SelM Reveal Redox Activity of a New Thioredoxin-like Family.
J.Biol.Chem., 281, 2006
1Y9J
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BU of 1y9j by Molmil
Solution structure of the rat Sly1 N-terminal domain
Descriptor: Sec1 family domain containing protein 1
Authors:Arac, D, Dulubova, I, Pei, J, Huryeva, I, Grishin, N.V, Rizo, J.
Deposit date:2004-12-15
Release date:2005-02-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional Structure of the rSly1 N-terminal Domain Reveals a Conformational Change Induced by Binding to Syntaxin 5.
J.Mol.Biol., 346, 2005
1Y8F
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Solution structure of the munc13-1 C1-domain
Descriptor: Unc-13 homolog A, ZINC ION
Authors:Shen, N, Guryev, O, Rizo, J.
Deposit date:2004-12-12
Release date:2005-04-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Intramolecular occlusion of the diacylglycerol-binding site in the C1 domain of munc13-1.
Biochemistry, 44, 2005
2CJT
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Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, UNC-13 HOMOLOG A
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural Basis for a Munc13-1 Dimeric to Munc13-1/Rim Heterodimer Switch
Plos Biol., 4, 2006
2CJS
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Structural Basis for a Munc13-1 Homodimer - Munc13-1 - RIM Heterodimer Switch: C2-domains as Versatile Protein-Protein Interaction Modules
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN 2, ...
Authors:Lu, J, Machius, M, Dulubova, I, Dai, H, Sudhof, T.C, Tomchick, D.R, Rizo, J.
Deposit date:2006-04-06
Release date:2006-06-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Basis for a Munc13-1 Homodimer to Munc13-1/Rim Heterodimer Switch.
Plos Biol., 4, 2006
2VFX
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BU of 2vfx by Molmil
Structure of the Symmetric Mad2 Dimer
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, ...
Authors:Yang, M, Li, B, Liu, C.-J, Tomchick, D.R, Machius, M, Rizo, J, Yu, H, Luo, X.
Deposit date:2007-11-05
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights Into MAD2 Regulation in the Spindle Checkpoint Revealed by the Crystal Structure of the Symmetric MAD2 Dimer.
Plos Biol., 6, 2008
1HS7
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BU of 1hs7 by Molmil
VAM3P N-TERMINAL DOMAIN SOLUTION STRUCTURE
Descriptor: SYNTAXIN VAM3
Authors:Dulubova, I, Yamaguchi, T, Wang, Y, Sudhof, T.C, Rizo, J.
Deposit date:2000-12-24
Release date:2001-03-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Vam3p structure reveals conserved and divergent properties of syntaxins.
Nat.Struct.Biol., 8, 2001
1KIL
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BU of 1kil by Molmil
Three-dimensional structure of the complexin/SNARE complex
Descriptor: Complexin I SNARE-complex binding region, MAGNESIUM ION, SNAP-25 C-terminal SNARE motif, ...
Authors:Chen, X, Tomchick, D, Kovrigin, E, Arac, D, Machius, M, Sudhof, T.C, Rizo, J.
Deposit date:2001-12-03
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-dimensional structure of the complexin/SNARE complex.
Neuron, 33, 2002
1KMD
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BU of 1kmd by Molmil
SOLUTION STRUCTURE OF THE VAM7P PX DOMAIN
Descriptor: Vacuolar morphogenesis protein VAM7
Authors:Lu, J, Garcia, J, Dulubova, I, Sudhof, T.C, Rizo, J.
Deposit date:2001-12-14
Release date:2002-06-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Vam7p PX domain.
Biochemistry, 41, 2002
1K5W
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THREE-DIMENSIONAL STRUCTURE OF THE SYNAPTOTAGMIN 1 C2B-DOMAIN: SYNAPTOTAGMIN 1 AS A PHOSPHOLIPID BINDING MACHINE
Descriptor: CALCIUM ION, Synaptotagmin I
Authors:Fernandez, I, Arac, D, Ubach, J, Gerber, S.H, Shin, O, Gao, Y, Anderson, R.G.W, Sudhof, T.C, Rizo, J.
Deposit date:2001-10-12
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of the synaptotagmin 1 C2B-domain: synaptotagmin 1 as a phospholipid binding machine.
Neuron, 32, 2001
1KLQ
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The Mad2 Spindle Checkpoint Protein Undergoes Similar Major Conformational Changes upon Binding to Either Mad1 or Cdc20
Descriptor: MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A, Mad2-binding peptide
Authors:Luo, X, Tang, Z, Rizo, J, Yu, H.
Deposit date:2001-12-12
Release date:2002-01-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The Mad2 spindle checkpoint protein undergoes similar major conformational changes upon binding to either Mad1 or Cdc20.
Mol.Cell, 9, 2002
2MR6
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Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
Descriptor: De novo designed Protein OR462
Authors:Xu, X, Nivon, L, Federizon, J.F, Maglaqui, M, Janjua, H, Mao, L, Xiao, R, Kornhaber, G, Baker, D, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-07-01
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
To be Published
4OML
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Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128R
Descriptor: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014

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