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PDB: 76 件

6NZS
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Dextranase AoDex KQ11
分子名称: Dextranase
著者Ren, W, Yan, W, Gu, L, Feng, Y, Dong, D, Wang, S, Wang, C, Lyu, M.
登録日2019-02-14
公開日2019-02-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus
To Be Published
6PZV
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BU of 6pzv by Molmil
Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin
分子名称: CITRATE ANION, DNA (cytosine-5)-methyltransferase 1, Histone H3.3, ...
著者Ren, W, Song, J.
登録日2019-08-01
公開日2020-07-15
最終更新日2020-08-12
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Direct readout of heterochromatic H3K9me3 regulates DNMT1-mediated maintenance DNA methylation.
Proc.Natl.Acad.Sci.USA, 117, 2020
4OWT
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Structural basis of SOSS1 complex assembly
分子名称: Integrator complex subunit 3, SOSS complex subunit B1, SOSS complex subunit C
著者Ren, W, Sun, Q, Tang, X, Song, H.
登録日2014-02-03
公開日2014-04-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of SOSS1 Complex Assembly and Recognition of ssDNA.
Cell Rep, 6, 2014
4OWX
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Structural basis of SOSS1 in complex with a 12nt ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Integrator complex subunit 3, SOSS complex subunit B1
著者Ren, W, Sun, Q, Tang, X, Song, H.
登録日2014-02-04
公開日2014-04-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of SOSS1 Complex Assembly and Recognition of ssDNA.
Cell Rep, 6, 2014
4OWW
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Structural basis of SOSS1 in complex with a 35nt ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), Integrator complex subunit 3, SOSS complex subunit B1, ...
著者Ren, W, Sun, Q, Tang, X, Song, H.
登録日2014-02-04
公開日2014-04-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of SOSS1 Complex Assembly and Recognition of ssDNA.
Cell Rep, 6, 2014
7LMM
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Crystal structure of bovine DNMT1 BAH1 domain in complex with H4K20me2
分子名称: DNA (cytosine-5)-methyltransferase 1,DNA (cytosine-5)-methyltransferase 1, Histone H4, ZINC ION
著者Ren, W, Song, J.
登録日2021-02-05
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.798 Å)
主引用文献DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation.
Nat Commun, 12, 2021
7LMK
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Crystal structure of bovine DNMT1 BAH1 domain in complex with H4K20me3
分子名称: DNA (cytosine-5)-methyltransferase 1, Histone H4, ZINC ION
著者Ren, W, Song, J.
登録日2021-02-05
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.647 Å)
主引用文献DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation.
Nat Commun, 12, 2021
5NVA
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Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
分子名称: N-acetyl-beta-neuraminic acid, Putative sodium:solute symporter, SODIUM ION
著者Wahlgren, W.Y, North, R.A, Dunevall, E, Goyal, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
登録日2017-05-03
公開日2018-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
5NV9
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Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
分子名称: DODECYL-BETA-D-MALTOSIDE, N-acetyl-beta-neuraminic acid, PHOSPHATE ION, ...
著者Wahlgren, W.Y, North, R.A, Dunevall, E, Paz, A, Goyal, P, Bisignano, P, Grabe, M, Dobson, R, Abramson, J, Ramaswamy, S, Friemann, R.
登録日2017-05-03
公開日2018-04-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+site.
Nat Commun, 9, 2018
8AVV
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Cryo-EM structure of DrBphP photosensory module in Pr state
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
8AVX
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Cryo-EM structure of DrBphP in Pfr state
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
8AVW
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BU of 8avw by Molmil
Cryo-EM structure of DrBphP in Pr state
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
4AM2
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Bacterioferritin from Blastochloris viridis
分子名称: BACTERIOFERRITIN, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Wahlgren, W.Y, Omran, H, von Stetten, D, Royant, A, van der Post, S, Katona, G.
登録日2012-03-07
公開日2012-10-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Characterization of Bacterioferritin from Blastochloris Viridis.
Plos One, 7, 2012
4AM4
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Bacterioferritin from Blastochloris viridis
分子名称: BACTERIOFERRITIN, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Wahlgren, W.Y, Omran, H, von Stetten, D, Royant, A, van der Post, S, Katona, G.
登録日2012-03-07
公開日2012-10-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural Characterization of Bacterioferritin from Blastochloris Viridis.
Plos One, 7, 2012
4AM5
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Bacterioferritin from Blastochloris viridis
分子名称: BACTERIOFERRITIN, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Wahlgren, W.Y, Omran, H, von Stetten, D, Royant, A, van der Post, S, Katona, G.
登録日2012-03-07
公開日2012-10-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural Characterization of Bacterioferritin from Blastochloris Viridis.
Plos One, 7, 2012
2XTT
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BU of 2xtt by Molmil
Bovine trypsin in complex with evolutionary enhanced Schistocerca gregaria protease inhibitor 1 (SGPI-1-P02)
分子名称: ACETATE ION, CALCIUM ION, CATIONIC TRYPSIN, ...
著者Wahlgren, W.Y, Pal, G, Kardos, J, Porrogi, P, Szenthe, B, Patthy, A, Graf, L, Katona, G.
登録日2010-10-12
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献The catalytic aspartate is protonated in the Michaelis complex formed between trypsin and an in vitro evolved substrate-like inhibitor: a refined mechanism of serine protease action.
J.Biol.Chem., 286, 2011
6UCA
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BU of 6uca by Molmil
Crystal structure of human ZCCHC4 in complex with SAH
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, rRNA N6-adenosine-methyltransferase ZCCHC4
著者Lu, J.W, Ren, W.D, Huang, M.J, Gao, L, Li, D.X, Wang, G.G, Song, J.
登録日2019-09-15
公開日2019-10-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.103 Å)
主引用文献Structure and regulation of ZCCHC4 in m6A-methylation of 28S rRNA.
Nat Commun, 10, 2019
5FHF
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BU of 5fhf by Molmil
Crystal structure of Bacteroides sp Pif1 in complex with ADP-AlF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, TETRAFLUOROALUMINATE ION, Uncharacterized protein
著者Zhou, X, Ren, W, Bharath, S.R, Song, H.
登録日2015-12-22
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
5FHH
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Structure of human Pif1 helicase domain residues 200-641
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase PIF1, TETRAFLUOROALUMINATE ION
著者Zhou, X, Ren, W, Bharath, S.R, Song, H.
登録日2015-12-22
公開日2016-03-30
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
5FHE
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Crystal structure of Bacteroides Pif1 bound to ssDNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
著者Zhou, X, Ren, W, Bharath, S.R, Song, H.
登録日2015-12-22
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
5FHG
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Structure of unliganded Pif1 from Bacteroides sp
分子名称: Uncharacterized protein
著者Zhou, X, Ren, W, Bharath, S.R, Song, H.
登録日2015-12-22
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
5FHD
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Structure of Bacteroides sp Pif1 complexed with tailed dsDNA resulting in ssDNA bound complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*CP*CP*GP*GP*GP*GP*CP*CP*GP*CP*GP*C)-3'), MAGNESIUM ION, ...
著者Zhou, X, Ren, W, Bharath, S.R, Song, H.
登録日2015-12-22
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
4DXW
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Crystal structure of NavRh, a voltage-gated sodium channel
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein, ...
著者Zhang, X, Ren, W.L, Yan, C.Y, Wang, J.W, Yan, N.
登録日2012-02-28
公開日2012-05-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Crystal structure of an orthologue of the NaChBac voltage-gated sodium channel
Nature, 486, 2012
4MW2
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Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-(3-{[5-chloro-2-hydroxy-3-(prop-2-en-1-yl)benzyl]amino}propyl)-3-thiophen-3-ylurea (Chem 1472)
分子名称: 1-(3-{[5-chloro-2-hydroxy-3-(prop-2-en-1-yl)benzyl]amino}propyl)-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
4MW7
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Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(5-chloro-2-ethoxy-3-iodobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1469)
分子名称: 1-{3-[(5-chloro-2-ethoxy-3-iodobenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2013-09-24
公開日2014-04-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014

 

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