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PDB: 373 results

4PDW
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BU of 4pdw by Molmil
A benzonitrile analogue inhibits rhinovirus replication
Descriptor: 4-[(4,5-dimethoxy-2-nitrophenyl)acetyl]benzonitrile, Capsid protein VP4/VP2, GLYCEROL, ...
Authors:Querol-Audi, J, Guerra, P, Lacroix, C, Roche, M, Franco, D, Froeyen, M, Terme, T, Vanelle, P, Neyts, J, Leyssen, P, Verdaguer, N.
Deposit date:2014-04-22
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:A novel benzonitrile analogue inhibits rhinovirus replication.
J.Antimicrob.Chemother., 69, 2014
1S0E
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Crystal structure of botulinum neurotoxin type B at pH 6.0
Descriptor: Botulinum neurotoxin type B, CALCIUM ION, ZINC ION
Authors:Eswaramoorthy, S, Kumaran, D, Keller, J, Swaminathan, S.
Deposit date:2003-12-30
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of metals in the biological activity of Clostridium botulinum neurotoxins
Biochemistry, 43, 2004
3VTY
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BU of 3vty by Molmil
Crystal structure of MamA
Descriptor: CHLORIDE ION, MamA
Authors:Zeytuni, N, Baran, D, Davidov, G, Zarivach, R.
Deposit date:2012-06-08
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inter-phylum structural conservation of the magnetosome-associated TPR-containing protein, MamA
J.Struct.Biol., 180, 2012
6C2W
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BU of 6c2w by Molmil
Crystal structure of human prothrombin mutant S101C/A470C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Prothrombin, ...
Authors:Chinnaraj, M, Chen, Z, Pelc, L, Grese, Z, Bystranowska, D, Di Cera, E, Pozzi, N.
Deposit date:2018-01-09
Release date:2018-02-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (4.12 Å)
Cite:Structure of prothrombin in the closed form reveals new details on the mechanism of activation.
Sci Rep, 8, 2018
3VTX
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Crystal structure of MamA protein
Descriptor: GLYCEROL, MamA
Authors:Zeytuni, N, Baran, D, Davidov, G, Zarivach, R.
Deposit date:2012-06-08
Release date:2012-10-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inter-phylum structural conservation of the magnetosome-associated TPR-containing protein, MamA
J.Struct.Biol., 180, 2012
1T3A
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BU of 1t3a by Molmil
Crystal structure of Clostridium botulinum neurotoxin type E catalytic domain
Descriptor: CHLORIDE ION, ZINC ION, neurotoxin type E
Authors:Agarwal, R, Eswaramoorthy, S, Kumaran, D, Binz, T, Swaminathan, S.
Deposit date:2004-04-26
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway
Biochemistry, 43, 2004
1AV3
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BU of 1av3 by Molmil
POTASSIUM CHANNEL BLOCKER KAPPA CONOTOXIN PVIIA FROM C. PURPURASCENS, NMR, 20 STRUCTURES
Descriptor: Kappa-conotoxin PVIIA
Authors:Scanlon, M.J, Naranjo, D, Thomas, L, Alewood, P.F, Lewis, R.J, Craik, D.J.
Deposit date:1997-09-24
Release date:1998-10-14
Last modified:2020-12-16
Method:SOLUTION NMR
Cite:Solution structure and proposed binding mechanism of a novel potassium channel toxin kappa-conotoxin PVIIA.
Structure, 5, 1997
2I6E
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BU of 2i6e by Molmil
Crystal structure of protein DR0370 from Deinococcus radiodurans, Pfam DUF178
Descriptor: Hypothetical protein, SULFATE ION
Authors:Tyagi, R, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-28
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structures of two proteins belonging to Pfam DUF178 revealed unexpected structural similarity to the DUF191 Pfam family.
Bmc Struct.Biol., 7, 2007
1BZV
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BU of 1bzv by Molmil
[D-ALAB26]-DES(B27-B30)-INSULIN-B26-AMIDE A SUPERPOTENT SINGLE-REPLACEMENT INSULIN ANALOGUE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: INSULIN
Authors:Kurapkat, G, Siedentopf, M, Gattner, H.G, Hagelstein, M, Brandenburg, D, Grotzinger, J, Wollmer, A.
Deposit date:1998-11-04
Release date:1999-05-18
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:The solution structure of a superpotent B-chain-shortened single-replacement insulin analogue.
Protein Sci., 8, 1999
3T81
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Crystal Structure of diiron adenine deaminase
Descriptor: Adenine deaminase 2, FE (III) ION
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-08-01
Release date:2011-11-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structure of diiron adenine deaminase
TO BE PUBLISHED
1T3C
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BU of 1t3c by Molmil
Clostridium botulinum type E catalytic domain E212Q mutant
Descriptor: CHLORIDE ION, ZINC ION, neurotoxin type E
Authors:Agarwal, R, Eswaramoorthy, S, Kumaran, D, Binz, T, Swaminathan, S.
Deposit date:2004-04-26
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of botulinum neurotoxin type E catalytic domain and its mutant Glu212-->Gln reveals the pivotal role of the Glu212 carboxylate in the catalytic pathway
Biochemistry, 43, 2004
1S0B
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BU of 1s0b by Molmil
Crystal structure of botulinum neurotoxin type B at pH 4.0
Descriptor: Botulinum neurotoxin type B, CALCIUM ION
Authors:Eswaramoorthy, S, Kumaran, D, Keller, J, Swaminathan, S.
Deposit date:2003-12-30
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of metals in the biological activity of Clostridium botulinum neurotoxins
Biochemistry, 43, 2004
1TH4
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BU of 1th4 by Molmil
crystal structure of NADPH depleted bovine liver catalase complexed with 3-amino-1,2,4-triazole
Descriptor: 3-AMINO-1,2,4-TRIAZOLE, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugadev, R, Ponnuswamy, M.N, Kumaran, D, Swaminathan, S, Sekar, K.
Deposit date:2004-06-01
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:crystal structure of bovine liver catalase
TO BE PUBLISHED
1T6F
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BU of 1t6f by Molmil
Crystal Structure of the Coiled-coil Dimerization Motif of Geminin
Descriptor: Geminin
Authors:Thepaut, M, Maiorano, D, Guichou, J.-F, Auge, M.-T, Dumas, C, Mechali, M, Padilla, A.
Deposit date:2004-05-06
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of the Coiled-coil Dimerization Motif of Geminin: Structural and Functional Insights on DNA Replication Regulation
J.Mol.Biol., 342, 2004
4O2A
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BU of 4o2a by Molmil
Tubulin-BAL27862 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-{1-[2-(4-aminophenyl)-2-oxoethyl]-1H-benzimidazol-2-yl}-1,2,5-oxadiazol-3-yl)amino]propanenitrile, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Prota, A.E, Franck, D, Bachmann, F, Bargsten, K, Buey, R.M, Pohlmann, J, Reinelt, S, Lane, H, Steinmetz, M.O.
Deposit date:2013-12-17
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Novel Microtubule-Destabilizing Drug BAL27862 Binds to the Colchicine Site of Tubulin with Distinct Effects on Microtubule Organization.
J.Mol.Biol., 426, 2014
4AKK
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BU of 4akk by Molmil
Structure of the NasR transcription antiterminator
Descriptor: 1,2-ETHANEDIOL, NITRATE REGULATORY PROTEIN
Authors:Boudes, M, Lazar, N, Graille, M, Durand, D, Gaidenko, T.A, Stewart, V, van Tilbeurgh, H.
Deposit date:2012-02-24
Release date:2012-06-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.145 Å)
Cite:The Structure of the Nasr Transcription Antiterminator Reveals a One-Component System with a Nit Nitrate Receptor Coupled to an Antar RNA-Binding Effector.
Mol.Microbiol., 85, 2012
4A8E
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BU of 4a8e by Molmil
The structure of a dimeric Xer recombinase from archaea
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PROBABLE TYROSINE RECOMBINASE XERC-LIKE, ...
Authors:Brooks, M.A, ElArnaout, T, Duranda, D, Lisboa, J, Lazar, N, Raynal, B, vanTilbeurgh, H, Serre, M, Quevillon-Cheruel, S.
Deposit date:2011-11-21
Release date:2012-12-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The Carboxy-Terminal Alpha N Helix of the Archaeal Xera Tyrosine Recombinase is a Molecular Switch to Control Site-Specific Recombination.
Plos One, 8, 2013
4O2B
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BU of 4o2b by Molmil
Tubulin-Colchicine complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Prota, A.E, Franck, D, Bachmann, F, Bargsten, K, Buey, R.M, Pohlmann, J, Reinelt, S, Lane, H, Steinmetz, M.O.
Deposit date:2013-12-17
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Novel Microtubule-Destabilizing Drug BAL27862 Binds to the Colchicine Site of Tubulin with Distinct Effects on Microtubule Organization.
J.Mol.Biol., 426, 2014
4AK8
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BU of 4ak8 by Molmil
Structure of F241L mutant of langerin carbohydrate recognition domain.
Descriptor: C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER K, CALCIUM ION, CHLORIDE ION, ...
Authors:Chabrol, E, Thepaut, M, Dezutter-Dambuyant, C, Vives, C, Marcoux, J, Kahn, R, Valadeau-Guilemond, J, Vachette, P, Durand, D, Fieschi, F.
Deposit date:2012-02-22
Release date:2013-04-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Alteration of the Langerin Oligomerization State Affects Birbeck Granule Formation.
Biophys.J., 108, 2015
4BFQ
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Assembly of a triple pi-stack of ligands in the binding site of Aplysia californica acetylcholine binding protein (AChBP)
Descriptor: 4,6-dimethyl-N'-(3-pyridin-2-ylisoquinolin-1-yl)pyrimidine-2-carboximidamide, GLYCEROL, SOLUBLE ACETYLCHOLINE RECEPTOR
Authors:Stornaiuolo, M, De Kloe, G.E, Rucktooa, P, Fish, A, van Elk, R, Edink, E.S, Bertrand, D, Smit, A.B, de Esch, I.J.P, Sixma, T.K.
Deposit date:2013-03-21
Release date:2013-05-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Assembly of a Pi-Pi Stack of Ligands in the Binding Site of an Acetylcholine Binding Protein
Nat.Commun., 4, 2013
4AEA
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BU of 4aea by Molmil
Dimeric alpha-cobratoxin X-ray structure: Localization of intermolecular disulfides and possible mode of binding to nicotinic acetylcholine receptors
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, LONG NEUROTOXIN 1
Authors:Rucktooa, P, Osipov, A.V, Kasheverov, I.E, Filkin, S.Y, Starkov, V.G, Andreeva, T.V, Bertrand, D, Utkin, Y.N, Tsetlin, V.I, Sixma, T.K.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Dimeric Alpha-Cobratoxin X-Ray Structure: Localization of Intermolecular Disulfides and Possible Mode of Binding to Nicotinic Acetylcholine Receptors.
J.Biol.Chem., 287, 2012
6DAU
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BU of 6dau by Molmil
Crystal structure of E33Q and E41Q mutant forms of the spermidine/spermine N-acetyltransferase SpeG from Vibrio cholerae
Descriptor: GLYCEROL, Spermidine N1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Beahan, A, Kulyavtsev, P, Tan, L, Tran, D, Kuhn, M.L, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-02
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of E33Q and E41Q mutant forms of the spermidine/spermine N-acetyltransferase SpeG from Vibrio cholerae.
To be Published
4CBV
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BU of 4cbv by Molmil
X-ray structure of full-length ComE from Streptococcus pneumoniae.
Descriptor: COME
Authors:Boudes, M, Durand, D, Graille, M, van Tilbeurgh, H, Quevillon-Cheruel, S.
Deposit date:2013-10-16
Release date:2014-02-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Structural Insights Into the Dimerization of the Response Regulator Come from Streptococcus Pneumoniae.
Nucleic Acids Res., 42, 2014

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