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PDB: 2930 results

6P6A
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BU of 6p6a by Molmil
Structure of Mouse Importin alpha - NIT2 NLS peptide complex
Descriptor: Importin subunit alpha-1, Nitrogen catabolic enzyme regulatory protein
Authors:Bernardes, N.E, Fukuda, C.A, Silva, T.D, Oliveira, H.C, Fontes, M.R.M.
Deposit date:2019-06-03
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Comparative study of the interactions between fungal transcription factor nuclear localization sequences with mammalian and fungal importin-alpha.
Sci Rep, 10, 2020
5O68
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BU of 5o68 by Molmil
Crystal Structure of the Pseudomonas functional amyloid secretion protein FapF - R157A mutant
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, FapF, LAURYL DIMETHYLAMINE-N-OXIDE
Authors:Rouse, S.L, Hare, S, Lambert, S, Morgan, R.M.L, Hawthorne, W.J, Berry, J, Matthews, S.J.
Deposit date:2017-06-05
Release date:2017-08-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:A new class of hybrid secretion system is employed in Pseudomonas amyloid biogenesis.
Nat Commun, 8, 2017
5OQA
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BU of 5oqa by Molmil
XFEL structure of the off state of a reversibly photoswitching fluorescent protein determined using the GDVN injection method
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
Deposit date:2017-08-11
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
6JN2
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BU of 6jn2 by Molmil
Crystal structure of the coiled-coil domains of human DOT1L in complex with AF10
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10
Authors:Song, X, Wang, M, Yang, N, Xu, R.M.
Deposit date:2019-03-13
Release date:2019-09-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:A higher-order configuration of the heterodimeric DOT1L-AF10 coiled-coil domains potentiates their leukemogenenic activity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6PDN
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BU of 6pdn by Molmil
Human PIM1 bound to benzothiophene inhibitor 292
Descriptor: 4-{5-[(3-aminopropyl)carbamoyl]thiophen-2-yl}-1-benzothiophene-2-carboxylic acid, GLYCEROL, Serine/threonine-protein kinase pim-1, ...
Authors:Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human PIM1
To Be Published
6PDO
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BU of 6pdo by Molmil
Human PIM1 bound to benzothiophene inhibitor 354
Descriptor: 4-{5-[(3-aminopropyl)carbamoyl]thiophen-2-yl}-1-benzothiophene-2-carboxamide, Peptide, Serine/threonine-protein kinase pim-1
Authors:Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human PIM1
To Be Published
8AYB
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BU of 8ayb by Molmil
anammox-specific FabZ from Scalindua brodae
Descriptor: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase
Authors:Dietl, A, Barends, T.R.M.
Deposit date:2022-09-02
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of an unusual 3-hydroxyacyl dehydratase (FabZ) from a ladderane-producing organism with an unexpected substrate preference.
J.Biol.Chem., 299, 2023
6HAU
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BU of 6hau by Molmil
KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57
Descriptor: ACETATE ION, MRE fragment of PAN RNA, ZINC ION, ...
Authors:Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2018-08-08
Release date:2018-11-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition.
Nucleic Acids Res., 47, 2019
6PJJ
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BU of 6pjj by Molmil
Human PRPF4B bound to benzothiophene inhibitor 224
Descriptor: 1,2-ETHANEDIOL, 4-(5-{[(3-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide, PHOSPHATE ION, ...
Authors:Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-28
Release date:2019-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:to be published
To Be Published
6HL8
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BU of 6hl8 by Molmil
Crystal Structure of the CsiD Glutarate Hydroxylase in complex with Glutarate
Descriptor: FE (II) ION, GLUTARIC ACID, Protein CsiD
Authors:Williams, R.M, Mayans, O, Hartig, J.S.
Deposit date:2018-09-10
Release date:2018-12-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate.
Nat Commun, 9, 2018
8AFI
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BU of 8afi by Molmil
GABARAP in complex with LIR motif of HsATG3
Descriptor: ACETATE ION, GLYCEROL, Gamma-aminobutyric acid receptor-associated protein, ...
Authors:Farnung, J, Benoit, R.M, Corn, J.E, Bode, J.W.
Deposit date:2022-07-18
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Semisynthetic LC3 Probes for Autophagy Pathways Reveal a Noncanonical LC3 Interacting Region Motif Crucial for the Enzymatic Activity of Human ATG3.
Acs Cent.Sci., 9, 2023
6PDI
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BU of 6pdi by Molmil
Human PIM1 bound to benzothiophene inhibitor 224
Descriptor: 1,2-ETHANEDIOL, 4-(5-{[(3-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide, GLYCEROL, ...
Authors:Godoi, P.H.C, Fala, A.M, Santiago, A.S, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Human PIM1
To Be Published
6HAL
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BU of 6hal by Molmil
Human carbonmonoxy hemoglobin SFX dataset
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Doak, B, Gorel, A, Foucar, L, Barends, T.R.M, Gruenbein, M.L, Hilpert, M, Kloos, M, Nass Kovacs, G, Roome, C.M, Shoeman, R.L, Stricker, M, Tono, K, You, D, Ueda, K, Sherrell, D.A, Owen, R.L, Schlichting, I.
Deposit date:2018-08-07
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallography on a chip - without the chip: sheet-on-sheet sandwich.
Acta Crystallogr D Struct Biol, 74, 2018
6PDP
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BU of 6pdp by Molmil
Human PIM1 bound to benzothiophene inhibitor 379
Descriptor: 5-[2-(acetylamino)-1-benzothiophen-4-yl]-N-cyclopropylthiophene-2-carboxamide, Peptide, SULFATE ION, ...
Authors:Godoi, P.H.C, Sriranganadane, D, Santiago, A.S, Fala, A.M, Ramos, P.Z, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human PIM1
To Be Published
5O8A
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BU of 5o8a by Molmil
Crystal Structure of rsEGFP2 in the non-fluorescent off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Coquelle, N, Sliwa, M, Woodhouse, J, Schiro, G, Adam, V, Aquila, A, Barends, T.R.M, Boutet, S, Byrdin, M, Carbajo, S, De la Mora, E, Doak, R.B, Feliks, M, Fieschi, F, Foucar, L, Guillon, V, Hilpert, M, Hunter, M, Jakobs, S, Koglin, J.E, Kovacsova, G, Lane, T.J, Levy, B, Liang, M, Nass, K, Ridard, J, Robinson, J.S, Roome, C.M, Ruckebusch, C, Seaberg, M, Thepaut, M, Cammarata, M, Demachy, I, Field, M, Shoeman, R.L, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2017-06-12
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.
Nat Chem, 10, 2018
5O8I
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BU of 5o8i by Molmil
Crystal structure of human histidine triad nucleotide-binding protein 1 (hHINT1) crystallized at P212121 space group, and refined to 1.27 A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Histidine triad nucleotide-binding protein 1
Authors:Dolot, R.M, Seda, A, Nawrot, B.C.
Deposit date:2017-06-13
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Differences in crystal packing as the key factor for stabilization of the N-terminal fragment of hHINT1 protein
To Be Published
7A7D
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BU of 7a7d by Molmil
Cadherin fit into cryo-ET map
Descriptor: Desmocollin-2, Desmoglein-2
Authors:Sikora, M, Ermel, U.H, Seybold, A, Kunz, M, Calloni, G, Reitz, J, Vabulas, R.M, Hummer, G, Frangakis, A.S.
Deposit date:2020-08-28
Release date:2020-12-23
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography.
Proc.Natl.Acad.Sci.USA, 117, 2020
6PV8
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BU of 6pv8 by Molmil
Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001
Descriptor: (3-endo)-N-(2-bromophenyl)-9-methyl-9-azabicyclo[3.3.1]nonan-3-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gharpure, A, Teng, J, Zhuang, Y, Noviello, C.M, Walsh, R.M, Cabuco, R, Howard, R.J, Zaveri, N.T, Lindahl, E, Hibbs, R.E.
Deposit date:2019-07-19
Release date:2019-09-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Agonist Selectivity and Ion Permeation in the alpha 3 beta 4 Ganglionic Nicotinic Receptor.
Neuron, 104, 2019
7QRH
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BU of 7qrh by Molmil
Crystal structure of the 5-(aminomethyl)furan-3-yl methyl phosphate kinase MfnE from Methanococcus vannielii.
Descriptor: Aspartate/glutamate/uridylate kinase, SULFATE ION
Authors:Maddock, R.M.A, Race, P.R, Burton, N.M.
Deposit date:2022-01-11
Release date:2023-01-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of the 5-(aminomethyl)furan-3-yl methyl phosphate kinase MfnE from Methanococcus vannielii.
To Be Published
6PV7
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BU of 6pv7 by Molmil
Human alpha3beta4 nicotinic acetylcholine receptor in complex with nicotine
Descriptor: (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gharpure, A, Teng, J, Zhuang, Y, Noviello, C.M, Walsh, R.M, Cabuco, R, Howard, R.J, Zaveri, N.T, Lindahl, E, Hibbs, R.E.
Deposit date:2019-07-19
Release date:2019-09-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Agonist Selectivity and Ion Permeation in the alpha 3 beta 4 Ganglionic Nicotinic Receptor.
Neuron, 104, 2019
6PW3
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BU of 6pw3 by Molmil
LARP1 DM15 FYRE (F844Y, R847E) mutant bound to m7GpppG dinucleotide (capG)
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, La-related protein 1, MAGNESIUM ION
Authors:Lahr, R.M, Berman, A.J.
Deposit date:2019-07-22
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Capturing the Mechanism Underlying TOP mRNA Binding to LARP1.
Structure, 27, 2019
6HR1
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BU of 6hr1 by Molmil
Crystal structure of the YFPnano fusion protein
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Benoit, R.M.
Deposit date:2018-09-26
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 2021
6HAT
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BU of 6hat by Molmil
Globular domain of herpesvirus saimiri ORF57
Descriptor: ACETATE ION, ZINC ION, mRNA export factor ICP27 homolog
Authors:Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2018-08-08
Release date:2018-11-21
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition.
Nucleic Acids Res., 47, 2019
7B2M
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BU of 7b2m by Molmil
Cryo-EM structure of complement C4b in complex with nanobody E3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-C4b nanobody E3, Complement C4 alpha chain, ...
Authors:Oosterheert, W, De la O Becerra, K.I, van den Bos, R.M, Gros, P.
Deposit date:2020-11-27
Release date:2022-03-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Multifaceted Activities of Seven Nanobodies against Complement C4b.
J Immunol., 208, 2022
6HIF
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BU of 6hif by Molmil
Kuenenia stuttgartiensis hydrazine dehydrogenase complex
Descriptor: GLYCEROL, HEME C, Hydrazine dehydrogenase, ...
Authors:Akram, M, Dietl, A, Mersdorf, U, Prinz, S, Maalcke, W, Keltjens, J, Ferousi, C, de Almeida, N.M, Reimann, J, Kartal, B, Jetten, M.S.M, Parey, K, Barends, T.R.M.
Deposit date:2018-08-29
Release date:2019-04-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A 192-heme electron transfer network in the hydrazine dehydrogenase complex.
Sci Adv, 5, 2019

222624

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