Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2920 件

6EN9
DownloadVisualize
BU of 6en9 by Molmil
E. coli Hydrogenase-2 (hydrogen reduced form)
分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, Hydrogenase-2 large chain, ...
著者Carr, S.B, Beaton, S.E, Evans, R.M, Armstrong, F.A.
登録日2017-10-04
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of hydrogenase-2 fromEscherichia coli: implications for H2-driven proton pumping.
Biochem. J., 475, 2018
2CDP
DownloadVisualize
BU of 2cdp by Molmil
Structure of a CBM6 in complex with neoagarohexaose
分子名称: 1,2-ETHANEDIOL, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-AGARASE 1, ...
著者Henshaw, J, Horne, A, Van Bueren, A.L, Money, V.A, Bolam, D.N, Czjzek, M, Weiner, R.M, Hutcheson, S.W, Davies, G.J, Boraston, A.B, Gilbert, H.J.
登録日2006-01-26
公開日2006-02-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Family 6 Carbohydrate Binding Modules in Beta-Agarases Display Exquisite Selectivity for the Non- Reducing Termini of Agarose Chains.
J.Biol.Chem., 281, 2006
1UWV
DownloadVisualize
BU of 1uwv by Molmil
Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase
分子名称: 23S RRNA (URACIL-5-)-METHYLTRANSFERASE RUMA, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
著者Lee, T.T, Agarwalla, S, Stroud, R.M.
登録日2004-02-11
公開日2004-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Ruma, an Iron-Sulfur Cluster Containing E. Coli Ribosomal RNA 5-Methyluridine Methyltransferase.
Structure, 12, 2004
2FLT
DownloadVisualize
BU of 2flt by Molmil
The X-ray structure of the cis-3-chloroacrylic acid dehalogenase cis-CaaD inactivated with (R)-Oxirane-2-carboxylate
分子名称: LACTIC ACID, cis-3-chloroacrylic acid dehalogenase
著者de Jong, R.M.
登録日2006-01-06
公開日2006-11-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Native and Inactivated cis-3-Chloroacrylic Acid Dehalogenase: STRUCTURAL BASIS FOR SUBSTRATE SPECIFICITY AND INACTIVATION BY (R)-OXIRANE-2-CARBOXYLATE.
J.Biol.Chem., 282, 2007
5WN9
DownloadVisualize
BU of 5wn9 by Molmil
Structure of antibody 2D10 bound to the central conserved region of RSV G
分子名称: Major surface glycoprotein G, scFv 2D10
著者Fedechkin, S.O, George, N.L, Wolff, J.T, Kauvar, L.M, DuBois, R.M.
登録日2017-07-31
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Structures of respiratory syncytial virus G antigen bound to broadly neutralizing antibodies.
Sci Immunol, 3, 2018
2F60
DownloadVisualize
BU of 2f60 by Molmil
Crystal Structure of the Dihydrolipoamide Dehydrogenase (E3)-Binding Domain of Human E3-Binding Protein
分子名称: GLYCEROL, Pyruvate dehydrogenase protein X component
著者Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T.
登録日2005-11-28
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex.
Structure, 14, 2006
2EXL
DownloadVisualize
BU of 2exl by Molmil
GRP94 N-terminal Domain bound to geldanamycin
分子名称: Endoplasmin, GELDANAMYCIN, PENTAETHYLENE GLYCOL, ...
著者Reardon, P.N, Immormino, R.M, Gewirth, D.T.
登録日2005-11-08
公開日2006-10-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Different poses for ligand and chaperone in inhibitor-bound Hsp90 and GRP94: implications for paralog-specific drug design.
J.Mol.Biol., 388, 2009
6FAD
DownloadVisualize
BU of 6fad by Molmil
SR protein kinase 1 (SRPK1) in complex with the RGG-box of HSV1 ICP27
分子名称: PHOSPHATE ION, SRSF protein kinase 1, mRNA export factor
著者Tunnicliffe, R.B, Levy, C, Mould, A.P, Mckenzie, E.A, Sandri-Goldin, R.M, Golovanov, A.P.
登録日2017-12-15
公開日2019-09-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Molecular Mechanism of SR Protein Kinase 1 Inhibition by the Herpes Virus Protein ICP27.
Mbio, 10, 2019
6EAS
DownloadVisualize
BU of 6eas by Molmil
Co-crystal of pseudokinase DRIK1 (drought responsive inactive kinase 1) bound to ENMD-2076
分子名称: 6-(4-methylpiperazin-1-yl)-N-(5-methyl-1H-pyrazol-3-yl)-2-[(E)-2-phenylethenyl]pyrimidin-4-amine, GLYCEROL, drought responsive inactive kinase 1
著者Aquino, B, Counago, R.M, Fala, A.M, Massirer, K.B, Elkins, J.M, Arruda, P, Structural Genomics Consortium (SGC)
登録日2018-08-03
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Co-crystal of pseudokinase DRIK1 with ENMD-2076
To be Published
6E9N
DownloadVisualize
BU of 6e9n by Molmil
E. coli D-galactonate:proton symporter in the inward open form
分子名称: D-galactonate transport, D-gluconic acid, nonyl beta-D-glucopyranoside
著者Leano, J.B, Edwards, R.H, Stroud, R.M.
登録日2018-08-01
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.915 Å)
主引用文献Structures suggest a mechanism for energy coupling by a family of organic anion transporters.
Plos Biol., 17, 2019
6EHS
DownloadVisualize
BU of 6ehs by Molmil
E. coli Hydrogenase-2 chemically reduced structure
分子名称: CARBONMONOXIDE-(DICYANO) IRON, DITHIONITE, FE3-S4 CLUSTER, ...
著者Carr, S.B, Evans, R.M, Beaton, S.E, Armstrong, F.A.
登録日2017-09-15
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of hydrogenase-2 fromEscherichia coli: implications for H2-driven proton pumping.
Biochem. J., 475, 2018
5V4R
DownloadVisualize
BU of 5v4r by Molmil
Crystal structure of LARP1-unique domain DM15 bound to m7GTP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, La-related protein 1
著者Berman, A.J, Lahr, R.M.
登録日2017-03-10
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs.
Elife, 6, 2017
2FR0
DownloadVisualize
BU of 2fr0 by Molmil
The first ketoreductase of the erythromycin synthase (crystal form 1)
分子名称: Erythromycin synthase, EryAI, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Keatinge-Clay, A.T, Stroud, R.M.
登録日2006-01-18
公開日2006-04-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The Structure of a Ketoreductase Determines the Organization of the beta-Carbon Processing Enzymes of Modular Polyketide Synthases
Structure, 14, 2006
6CNX
DownloadVisualize
BU of 6cnx by Molmil
Crystal Structure of the Human vaccinia-related kinase 1 (VRK1) bound to an N-propynyl-N-isopentyl-dihydropteridin inhibitor
分子名称: (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-8-(3-methylbutyl)-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one, (7S)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-8-(3-methylbutyl)-5-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one, ACETATE ION, ...
著者Counago, R.M, dos Reis, C.V, de Souza, G.P, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2018-03-09
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Human Vaccinia-Related Kinase 1 (VRK1) bound to a N-propynyl-N-isopentil-dihydropteridine inhibitor
To Be Published
5W7K
DownloadVisualize
BU of 5w7k by Molmil
Crystal structure of OxaG
分子名称: CHLORIDE ION, OxaG, S-ADENOSYL-L-HOMOCYSTEINE
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5W7S
DownloadVisualize
BU of 5w7s by Molmil
Crystal structure of OxaC in complex with sinefungin and meleagrin
分子名称: (3E,7aR,12aS)-6-hydroxy-3-[(1H-imidazol-4-yl)methylidene]-12-methoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, SINEFUNGIN
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.948 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
6E1N
DownloadVisualize
BU of 6e1n by Molmil
Structure of AtTPC1(DDE) in state 1
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CALCIUM ION, PALMITIC ACID, ...
著者Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
登録日2018-07-10
公開日2018-09-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6E1K
DownloadVisualize
BU of 6e1k by Molmil
Structure of AtTPC1(DDE) reconstituted in saposin A with cat06 Fab
分子名称: CALCIUM ION, PALMITIC ACID, Two pore calcium channel protein 1, ...
著者Kintzer, A.F, Green, E.M, Cheng, Y, Stroud, R.M.
登録日2018-07-10
公開日2018-09-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for activation of voltage sensor domains in an ion channel TPC1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2FVU
DownloadVisualize
BU of 2fvu by Molmil
Structure of the yeast Sir3 BAH domain
分子名称: Regulatory protein SIR3
著者Xu, R.M.
登録日2006-01-31
公開日2006-09-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain.
Mol.Cell.Biol., 26, 2006
2FWY
DownloadVisualize
BU of 2fwy by Molmil
Structure of human Hsp90-alpha bound to the potent water soluble inhibitor PU-H64
分子名称: 8-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3-ISOPROPYLAMINO-PROPYL)-ADENINE, Heat shock protein HSP 90-alpha
著者Immormino, R.M, Gewirth, D.T.
登録日2006-02-03
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors.
J.Med.Chem., 49, 2006
2EVQ
DownloadVisualize
BU of 2evq by Molmil
Solution structure of HP7, a 12-residue beta hairpin
分子名称: HP7
著者Andersen, N.H, Olsen, K.A, Fesinmeyer, R.M.
登録日2005-10-31
公開日2006-03-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Minimization and Optimization of Designed beta-Hairpin Folds
J.Am.Chem.Soc., 128, 2006
5V7C
DownloadVisualize
BU of 5v7c by Molmil
Crystal structure of LARP1-unique domain DM15 bound 5'TOP RNA sequence
分子名称: La-related protein 1, RNA (5'-R(*CP*UP*UP*UP*UP*CP*CP*G)-3')
著者Berman, A.J, Lahr, R.M, Al-Ashtal, H.A.
登録日2017-03-20
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs.
Elife, 6, 2017
6CW2
DownloadVisualize
BU of 6cw2 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 1
分子名称: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
著者Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
登録日2018-03-29
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2ESA
DownloadVisualize
BU of 2esa by Molmil
GRP94 n-terminal domain bound to geldanamycin: effects of mutants 168-169 KS-AA
分子名称: Endoplasmin, GELDANAMYCIN, TETRAETHYLENE GLYCOL, ...
著者Immormino, R.M, Metzger IV, L.E, Gewirth, D.T.
登録日2005-10-25
公開日2006-10-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of GRP94 with the specific mutation KS168-169AA; with bound Geldanamycin
To be Published
2F5Z
DownloadVisualize
BU of 2f5z by Molmil
Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein
分子名称: Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, Pyruvate dehydrogenase protein X component, ...
著者Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T.
登録日2005-11-28
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex.
Structure, 14, 2006

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon