Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27191 results

6AX5
DownloadVisualize
BU of 6ax5 by Molmil
RPT1 region of INI1/SNF5/SMARCB1_HUMAN - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Authors:Girvin, M.E, Cahill, S.M, Harris, R, Cowburn, D, Spira, M, Wu, X, Prakash, R, Bernowitz, M, Almo, S.C, Kalpana, G.V.
Deposit date:2017-09-06
Release date:2017-10-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:INI1/SMARCB1 Rpt1 domain mimics TAR RNA in binding to integrase to facilitate HIV-1 replication.
Nat Commun, 12, 2021
6SST
DownloadVisualize
BU of 6sst by Molmil
cryo-em structure of alpha-synuclein fibril polymorph 2B
Descriptor: Alpha-synuclein
Authors:Guerrero-Ferreira, R, Taylor, N.M.I, Arteni, A.A, Melki, R, Meier, B.H, Bockmann, A, Bousset, L, Stahlberg, H.
Deposit date:2019-09-09
Release date:2019-12-18
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy.
Elife, 8, 2019
8W2O
DownloadVisualize
BU of 8w2o by Molmil
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA, Pre-mRNA-processing factor 39, ...
Authors:Shi, S.S, Kuang, Z.L, Zhao, R.
Deposit date:2024-02-20
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast.
Rna, 2024
6Q3K
DownloadVisualize
BU of 6q3k by Molmil
Engineered Human HLA_A2 MHC Class I molecule in complex with NV9 peptide
Descriptor: ASN-LEU-VAL-PRO-MET-VAL-ALA-THR-VAL, Beta-2-microglobulin, COBALT (II) ION, ...
Authors:Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
Deposit date:2018-12-04
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Engineered Human HLA_A2MHC Class I molecule in complex with NV9 peptide
Sci Immunol, 2019
6Q40
DownloadVisualize
BU of 6q40 by Molmil
A secreted LysM effector of the wheat pathogen Zymoseptoria tritici protects the fungal hyphae against chitinase hydrolysis through ligand-dependent polymerisation of LysM homodimers
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LysM domain-containing protein
Authors:Mesters, J.R, Saleem-Batcha, R, Sanchez-Vallet, A, Thomma, B.P.H.J.
Deposit date:2018-12-05
Release date:2019-10-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.412 Å)
Cite:A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization.
Plos Pathog., 16, 2020
6SSX
DownloadVisualize
BU of 6ssx by Molmil
cryo-em structure of alpha-synuclein fibril polymorph 2A
Descriptor: Alpha-synuclein
Authors:Guerrero-Ferreira, R, Taylor, N.M.I, Arteni, A.A, Melki, R, Meier, B.H, Bockmann, A, Bousset, L, Stahlberg, H.
Deposit date:2019-09-09
Release date:2019-12-18
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy.
Elife, 8, 2019
6TLZ
DownloadVisualize
BU of 6tlz by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 3'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
8CTN
DownloadVisualize
BU of 8ctn by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction, no electric field)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CTT
DownloadVisualize
BU of 8ctt by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) at 100K
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CTW
DownloadVisualize
BU of 8ctw by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) -Na+,Tl+ complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Potassium channel protein, SODIUM ION, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8A6E
DownloadVisualize
BU of 8a6e by Molmil
100 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA)
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gruhl, T, Weinert, T, Rodrigues, M.J, Milne, C.J, Ortolani, G, Nass, K, Nango, E, Sen, S, Johnson, P.J.M, Cirelli, C, Furrer, A, Mous, S, Skopintsev, P, James, D, Dworkowski, F, Baath, P, Kekilli, D, Oserov, D, Tanaka, R, Glover, H, Bacellar, C, Bruenle, S, Casadei, C.M, Diethelm, A.D, Gashi, D, Gotthard, G, Guixa-Gonzalez, R, Joti, Y, Kabanova, V, Knopp, G, Lesca, E, Ma, P, Martiel, I, Muehle, J, Owada, S, Pamula, F, Sarabi, D, Tejero, O, Tsai, C.J, Varma, N, Wach, A, Boutet, S, Tono, K, Nogly, P, Deupi, X, Iwata, S, Neutze, R, Standfuss, J, Schertler, G.F.X, Panneels, V.
Deposit date:2022-06-17
Release date:2023-03-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrafast structural changes direct the first molecular events of vision.
Nature, 615, 2023
6PVS
DownloadVisualize
BU of 6pvs by Molmil
Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor LL320
Descriptor: 9-(5-{[(3R)-3-amino-3-carboxypropyl][3-(3-carbamoylphenyl)prop-2-yn-1-yl]amino}-5-deoxy-alpha-D-lyxofuranosyl)-9H-purin-6-amine, NNMT protein
Authors:Noinaj, N, Huang, R, Chen, D, Yadav, R.
Deposit date:2019-07-21
Release date:2019-11-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.575 Å)
Cite:Novel Propargyl-Linked Bisubstrate Analogues as Tight-Binding Inhibitors for NicotinamideN-Methyltransferase.
J.Med.Chem., 62, 2019
6PVE
DownloadVisualize
BU of 6pve by Molmil
Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor LL319
Descriptor: 9-(5-{[(3S)-3-amino-3-carboxypropyl][3-(3-carbamoylphenyl)propyl]amino}-5-deoxy-alpha-D-ribofuranosyl)-9H-purin-6-amine, NNMT protein
Authors:Noinaj, N, Huang, R, Chen, D, Yadav, R.
Deposit date:2019-07-20
Release date:2019-11-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel Propargyl-Linked Bisubstrate Analogues as Tight-Binding Inhibitors for NicotinamideN-Methyltransferase.
J.Med.Chem., 62, 2019
8CTX
DownloadVisualize
BU of 8ctx by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) -K+,Tl+ complex
Descriptor: POTASSIUM ION, Potassium channel protein, THALLIUM (I) ION
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CTV
DownloadVisualize
BU of 8ctv by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) -Tl+ complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Potassium channel protein, SODIUM ION, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CTS
DownloadVisualize
BU of 8cts by Molmil
Room temperature crystal structure of a K+ selective NaK mutant (NaK2K)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CTU
DownloadVisualize
BU of 8ctu by Molmil
Crystal structure of a K+ selective NaK mutant (NaK2K) at Room temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
6Q6F
DownloadVisualize
BU of 6q6f by Molmil
Crystal structure of IDH1 R132H in complex with HMS101
Descriptor: (2~{R})-2-[2-[(3~{R})-3-(4-fluorophenyl)pyrrolidin-1-yl]ethyl]-1,4-dimethyl-piperazine, Isocitrate dehydrogenase [NADP] cytoplasmic
Authors:Chaturvedi, A, Goparaju, R, Gupta, C, Kluenemann, T, Araujo Cruz, M.M, Kloos, A, Goerlich, K, Schottmann, R, Struys, E.A, Ganser, A, Preller, M, Heuser, M.
Deposit date:2018-12-10
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:In vivo efficacy of mutant IDH1 inhibitor HMS-101 and structural resolution of distinct binding site.
Leukemia, 34, 2020
8CU1
DownloadVisualize
BU of 8cu1 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 500ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CU3
DownloadVisualize
BU of 8cu3 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 200ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CU4
DownloadVisualize
BU of 8cu4 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 1us, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
8CU2
DownloadVisualize
BU of 8cu2 by Molmil
Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 100ns, with eightfold extrapolation of structure factor differences
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
Authors:Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D.
Deposit date:2022-05-16
Release date:2023-07-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Direct visualization of electric field-stimulated ion conduction in a potassium channel
To Be Published
6QI5
DownloadVisualize
BU of 6qi5 by Molmil
Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins
Descriptor: Hexon protein, PIIIa, Penton protein, ...
Authors:Condezo, G.N, Marabini, R, Gomez-Blanco, J, SanMartin, C.
Deposit date:2019-01-17
Release date:2020-08-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins.
Sci Adv, 7, 2021
6Q8Y
DownloadVisualize
BU of 6q8y by Molmil
Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Heckel, E, Cheng, J, Buschauer, R, Kater, L, Berninghausen, O, Becker, T, Beckmann, R.
Deposit date:2018-12-16
Release date:2019-03-13
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the 80S ribosome-Xrn1 nuclease complex.
Nat.Struct.Mol.Biol., 26, 2019
6X29
DownloadVisualize
BU of 6x29 by Molmil
SARS-CoV-2 rS2d Down State Spike Protein Trimer
Descriptor: Spike glycoprotein
Authors:Henderson, R, Acharya, P.
Deposit date:2020-05-20
Release date:2020-05-27
Last modified:2020-10-21
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Controlling the SARS-CoV-2 spike glycoprotein conformation.
Nat.Struct.Mol.Biol., 27, 2020

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon