Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27191 results

4KAH
DownloadVisualize
BU of 4kah by Molmil
Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 4-bromo-1H-pyrazole
Descriptor: 4-bromo-1H-pyrazole, ADENOSINE, BROMIDE ION, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-22
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 4-bromo-1H-pyrazole
To be Published
7VWV
DownloadVisualize
BU of 7vwv by Molmil
The crystal structure of African swine fever virus I73R
Descriptor: I73R
Authors:Shen, Z, Liang, R.
Deposit date:2021-11-11
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:African swine fever virus I73R is a critical virulence-related gene: A potential target for attenuation.
Proc.Natl.Acad.Sci.USA, 120, 2023
2WW9
DownloadVisualize
BU of 2ww9 by Molmil
Cryo-EM structure of the active yeast Ssh1 complex bound to the yeast 80S ribosome
Descriptor: 25S RRNA, 60S RIBOSOMAL PROTEIN L17-A, 60S RIBOSOMAL PROTEIN L19, ...
Authors:Becker, T, Mandon, E, Bhushan, S, Jarasch, A, Armache, J.P, Funes, S, Jossinet, F, Gumbart, J, Mielke, T, Berninghausen, O, Schulten, K, Westhof, E, Gilmore, R, Beckmann, R.
Deposit date:2009-10-22
Release date:2009-12-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Science, 326, 2009
3ZKT
DownloadVisualize
BU of 3zkt by Molmil
SOLUTION STRUCTURE OF THE SOMATOSTATIN SST3 RECEPTOR ANTAGONIST TAU- CONOTOXIN CnVA
Descriptor: TAU-CNVA
Authors:Petrel, C, Hocking, H.G, Reynaud, M, Favreau, P, Paolini-Bertrand, M, Peigneur, S, Upert, G, Tytgat, J, Gilles, N, Hartley, O, Boelens, R, Stocklin, R, Servent, D.
Deposit date:2013-01-24
Release date:2013-04-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification, Structural and Pharmacological Characterization of Tau-Cnva, a Conopeptide that Selectively Interacts with Somatostatin Sst3 Receptor.
Biochem.Pharmacol, 85, 2013
1XFN
DownloadVisualize
BU of 1xfn by Molmil
NMR structure of the ground state of the photoactive yellow protein lacking the N-terminal part
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
Deposit date:2004-09-15
Release date:2005-08-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
3ZEH
DownloadVisualize
BU of 3zeh by Molmil
Solution structure of the Hs. PSIP1 PWWP domain
Descriptor: PC4 AND SFRS1-INTERACTING PROTEIN
Authors:van Ingen, H, van Nuland, R, Timmers, H.T.M, Boelens, R.
Deposit date:2012-12-05
Release date:2013-05-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Nucleosomal DNA Binding Drives the Recognition of H3K36-Methylated Nucleosomes by the Psip1-Pwwp Domain.
Epigenetics Chromatin, 6, 2013
5AAD
DownloadVisualize
BU of 5aad by Molmil
Aurora A kinase bound to an imidazopyridine inhibitor (7a)
Descriptor: 7-(1-benzyl-1H-pyrazol-4-yl)-6-chloro-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridine, AURORA KINASE A, SULFATE ION
Authors:McIntyre, P.J, Kosmopoulou, M, Bayliss, R.
Deposit date:2015-07-24
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:7-(Pyrazol-4-Yl)-3H-Imidazo[4,5-B]Pyridine-Based Derivatives for Kinase Inhibition: Co-Crystallisation Studies with Aurora-A Reveal Distinct Differences in the Orientation of the Pyrazole N1-Substituent.
Bioorg.Med.Chem.Lett., 25, 2015
1NZJ
DownloadVisualize
BU of 1nzj by Molmil
Crystal Structure and Activity Studies of Escherichia Coli Yadb ORF
Descriptor: Hypothetical protein yadB, ZINC ION
Authors:Campanacci, V, Kern, D.Y, Becker, H.D, Spinelli, S, Valencia, C, Vincentelli, R, Pagot, F, Bignon, C, Giege, R, Cambillau, C.
Deposit date:2003-02-18
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Escherichia coli YadB gene product reveals a novel aminoacyl-tRNA synthetase like activity.
J.Mol.Biol., 337, 2004
2VDD
DownloadVisualize
BU of 2vdd by Molmil
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Descriptor: CHLORIDE ION, OUTER MEMBRANE PROTEIN TOLC, POTASSIUM ION
Authors:Bavro, V.N, Pietras, Z, Furnham, N, Perez-Cano, L, Fernandez-Recio, J, Pei, X.Y, Truer, R, Misra, R, Luisi, B.
Deposit date:2007-10-04
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell, 30, 2008
2V40
DownloadVisualize
BU of 2v40 by Molmil
Human Adenylosuccinate synthetase isozyme 2 in complex with GDP
Descriptor: ADENYLOSUCCINATE SYNTHETASE ISOZYME 2, GUANOSINE-5'-DIPHOSPHATE
Authors:Welin, M, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-06-27
Release date:2007-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human Adenylosuccinate Synthetase Isozyme 2 in Complex with Gdp
To be Published
1XFK
DownloadVisualize
BU of 1xfk by Molmil
1.8A crystal structure of formiminoglutamase from Vibrio cholerae O1 biovar eltor str. N16961
Descriptor: Formimidoylglutamase
Authors:Wu, R, Zhang, R, Shonda, C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-09-14
Release date:2004-10-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8A crystal structure of formiminoglutamas from Vibrio cholerae O1 biovar eltor str. N16961
To be Published
2UZ9
DownloadVisualize
BU of 2uz9 by Molmil
Human guanine deaminase (guaD) in complex with zinc and its product Xanthine.
Descriptor: GUANINE DEAMINASE, XANTHINE, ZINC ION
Authors:Moche, M, Welin, M, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den berg, S, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-04-26
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human Guanine Deaminase (Guad) in Complex with Zinc and its Product Xhantine
To be Published
2ZQO
DownloadVisualize
BU of 2zqo by Molmil
Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 29-kDa galactose-binding lectin, CADMIUM ION, ...
Authors:Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
Deposit date:2008-08-13
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
6JMQ
DownloadVisualize
BU of 6jmq by Molmil
LAT1-CD98hc complex bound to MEM-108 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, ...
Authors:Lee, Y, Nishizawa, T, Kusakizako, T, Oda, K, Ishitani, R, Nakane, T, Nureki, O.
Deposit date:2019-03-13
Release date:2019-06-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Cryo-EM structure of the human L-type amino acid transporter 1 in complex with glycoprotein CD98hc.
Nat.Struct.Mol.Biol., 26, 2019
7ZSC
DownloadVisualize
BU of 7zsc by Molmil
Crystal structure of the heterodimeric human C-P4H-II with truncated alpha subunit (C-P4H-II delta281)
Descriptor: Prolyl 4-hydroxylase subunit alpha-2, Protein disulfide-isomerase, SULFATE ION
Authors:Lebedev, A, Koski, M.K, Wierenga, R.K, Murthy, A.V, Sulu, R.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:Crystal structure of the collagen prolyl 4-hydroxylase (C-P4H) catalytic domain complexed with PDI: Toward a model of the C-P4H alpha 2 beta 2 tetramer.
J.Biol.Chem., 298, 2022
4QK0
DownloadVisualize
BU of 4qk0 by Molmil
Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6
Descriptor: GH127 beta-L-arabinofuranoside
Authors:Lansky, S, Salama, R, Dann, R, Shner, I, Manjasetty, B, Belrhali, H, Shoham, Y, Shoham, G.
Deposit date:2014-06-05
Release date:2015-06-10
Method:X-RAY DIFFRACTION (2.258 Å)
Cite:Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6
To be Published
1A2U
DownloadVisualize
BU of 1a2u by Molmil
STAPHYLOCOCCAL NUCLEASE, V23C VARIANT, COMPLEX WITH 1-N-BUTANE THIOL AND 3',5'-THYMIDINE DIPHOSPHATE
Descriptor: CALCIUM ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Wynn, R, Harkins, P.C, Richards, F.M, Fox, R.O.
Deposit date:1998-01-11
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mobile unnatural amino acid side chains in the core of staphylococcal nuclease.
Protein Sci., 5, 1996
1A3V
DownloadVisualize
BU of 1a3v by Molmil
STAPHYLOCOCCAL NUCLEASE, CYCLOPENTANE THIOL DISULFIDE TO V23C VARIANT
Descriptor: CALCIUM ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Wynn, R, Harkins, P.C, Richards, F.M, Fox, R.O.
Deposit date:1998-01-24
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparison of straight chain and cyclic unnatural amino acids embedded in the core of staphylococcal nuclease.
Protein Sci., 6, 1997
2V30
DownloadVisualize
BU of 2v30 by Molmil
Human orotidine 5'-phosphate decarboxylase domain of uridine monophospate synthetase (UMPS) in complex with its product UMP.
Descriptor: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE, URIDINE-5'-MONOPHOSPHATE
Authors:Moche, M, Ogg, D, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Welin, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-06-10
Release date:2007-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Human Orotidine 5'-Decarboxylase Domain of Human Uridine Monophosphate Synthetase (Umps)
To be Published
3BYX
DownloadVisualize
BU of 3byx by Molmil
Lactobacillus CASEI Thymidylate Synthase Ternary Complex with DUMP and the Phtalimidic Derivative C00 in Multiple Binding Modes
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-(4-hydroxybiphenyl-3-yl)-4-methyl-1H-isoindole-1,3(2H)-dione, Thymidylate synthase
Authors:Leone, R, Mangani, S, Cancian, L, Costi, M.P, Luciani, R, Ferrari, S.
Deposit date:2008-01-16
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of the binding modes of N-phenylphthalimides inhibiting bacterial thymidylate synthase through X-ray crystallography screening
J.Med.Chem., 54, 2011
1PZX
DownloadVisualize
BU of 1pzx by Molmil
Hypothetical protein APC36103 from Bacillus stearothermophilus: a lipid binding protein
Descriptor: Hypothetical protein APC36103, PALMITIC ACID
Authors:Zhang, R, Osipiuk, J, Zhou, M, Alkire, R, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-07-14
Release date:2004-01-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lipid binding protein APC36103 from Bacillus Stearothermophilus
To be Published
2V5F
DownloadVisualize
BU of 2v5f by Molmil
Crystal structure of wild type peptide-binding domain of human type I collagen prolyl 4-hydroxylase.
Descriptor: HEXA-HISTIDINE PEPTIDE, PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
Authors:Pekkala, M, Hieta, R, Kivirikko, K, Myllyharju, J, Wierenga, R.
Deposit date:2008-10-06
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal Structure of Wild Type Peptide-Binding Domain of Human Type I Collagen Prolyl 4- Hydroxylase.
To be Published
1Z9B
DownloadVisualize
BU of 1z9b by Molmil
Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Descriptor: Translation initiation factor IF-2
Authors:Wienk, H, Tomaselli, S, Bernard, C, Spurio, R, Picone, D, Gualerzi, C.O, Boelens, R.
Deposit date:2005-04-01
Release date:2005-08-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Protein Sci., 14, 2005
3C06
DownloadVisualize
BU of 3c06 by Molmil
Lactobacillus CASEI Thymidylate Synthase Ternary Complex With DUMP and the Phtalimidic Derivative 14C in Multiple Binding Modes-Mode 1
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-(2-chloropyridin-4-yl)-4-methyl-1H-isoindole-1,3(2H)-dione, Thymidylate synthase
Authors:Leone, R, Mangani, S, Cancian, L, Costi, M.P, Luciani, R, Ferrari, S.
Deposit date:2008-01-18
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of the binding modes of N-phenylphthalimides inhibiting bacterial thymidylate synthase through X-ray crystallography screening
J.Med.Chem., 54, 2011
1A5G
DownloadVisualize
BU of 1a5g by Molmil
HUMAN THROMBIN COMPLEXED WITH NOVEL SYNTHETIC PEPTIDE MIMETIC INHIBITOR AND HIRUGEN
Descriptor: (1S,7S)-7-amino-7-benzyl-N-[(1S)-4-carbamimidamido-1-{(1S)-1-hydroxy-2-oxo-2-[(2-phenylethyl)amino]ethyl}butyl]-8-oxohexahydro-1H-pyrazolo[1,2-a]pyridazine-1-carboxamide, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ...
Authors:St Charles, R, Tulinsky, A, Kahn, M.
Deposit date:1998-02-16
Release date:1998-05-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Bound structures of novel P3-P1' beta-strand mimetic inhibitors of thrombin.
J.Med.Chem., 42, 1999

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon