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PDB: 27201 件

5LC0
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Crystal structure of Zika virus NS2B-NS3 protease in complex with a boronate inhibitor
分子名称: N-((S)-3-(4-(aminomethyl)phenyl)-1-(((R)-4-guanidino-1-(5-hydroxy-1,3,2-dioxaborinan-2-yl)butyl)amino)-1-oxopropan-2-yl)benzamide, NS2B-NS3 protease,NS2B-NS3 protease
著者Lei, J, Hansen, G, Zhang, L.L, Hilgenfeld, R.
登録日2016-06-18
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Zika virus NS2B-NS3 protease in complex with a boronate inhibitor.
Science, 353, 2016
7KWX
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Spermidine N-acetyltransferase SpeG N152L mutant from Vibrio cholerae
分子名称: Spermidine N(1)-acetyltransferase
著者Le, V.T.B, Tsimbalyuk, S, Lim, E.Q, Solis, A, Gawat, D, Boeck, P, Renolo, R, Forwood, J.K, Kuhn, M.L.
登録日2020-12-02
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献The Vibrio cholerae SpeG Spermidine/Spermine N -Acetyltransferase Allosteric Loop and beta 6-beta 7 Structural Elements Are Critical for Kinetic Activity.
Front Mol Biosci, 8, 2021
5BMV
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CRYSTAL STRUCTURE OF TUBULIN-STATHMIN-TTL-Vinblastine COMPLEX
分子名称: (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Wang, Y, Chen, Q, Zhang, R.
登録日2015-05-23
公開日2016-07-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into the Pharmacophore of Vinca Domain Inhibitors of Microtubules.
Mol.Pharmacol., 89, 2016
7KWQ
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Spermidine N-acetyltransferase SpeG R149-K152 chimera from Vibrio cholerae and hSSAT
分子名称: Spermidine N(1)-acetyltransferase
著者Le, V.T.B, Tsimbalyuk, S, Lim, E.Q, Solis, A, Gawat, D, Boeck, P, Renolo, R, Forwood, J.K, Kuhn, M.L.
登録日2020-12-01
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Vibrio cholerae SpeG Spermidine/Spermine N -Acetyltransferase Allosteric Loop and beta 6-beta 7 Structural Elements Are Critical for Kinetic Activity.
Front Mol Biosci, 8, 2021
5B2P
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Crystal structure of Francisella novicida Cas9 in complex with sgRNA and target DNA (TGA PAM)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Hirano, H, Nishimasu, H, Nakane, T, Ishitani, R, Nureki, O.
登録日2016-02-01
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Engineering of Francisella novicida Cas9
Cell, 164, 2016
4QD2
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Molecular basis for disruption of E-cadherin adhesion by botulinum neurotoxin A complex
分子名称: CALCIUM ION, Cadherin-1, Hemagglutinin component HA17, ...
著者Lee, K, Zhong, X, Gu, S, Kruel, A, Dorner, M.B, Perry, K, Rummel, A, Dong, M, Jin, R.
登録日2014-05-13
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for disruption of E-cadherin adhesion by botulinum neurotoxin A complex.
Science, 344, 2014
7KKJ
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Structure of anti-SARS-CoV-2 Spike nanobody mNb6
分子名称: CHLORIDE ION, SULFATE ION, Synthetic nanobody mNb6
著者Schoof, M.S, Faust, B.F, Saunders, R.A, Sangwan, S, Rezelj, V, Hoppe, N, Boone, M, Billesboelle, C.B, Puchades, C, Azumaya, C.M, Kratochvil, H.T, Zimanyi, M, Desphande, I, Liang, J, Dickinson, S, Nguyen, H.C, Chio, C.M, Merz, G.E, Thompson, M.C, Diwanji, D, Schaefer, K, Anand, A.A, Dobzinski, N, Zha, B.S, Simoneau, C.R, Leon, K, White, K.M, Chio, U.S, Gupta, M, Jin, M, Li, F, Liu, Y, Zhang, K, Bulkley, D, Sun, M, Smith, A.M, Rizo, A.N, Moss, F, Brilot, A.F, Pourmal, S, Trenker, R, Pospiech, T, Gupta, S, Barsi-Rhyne, B, Belyy, V, Barile-Hill, A.W, Nock, S, Liu, Y, Krogan, N.J, Ralston, C.Y, Swaney, D.L, Garcia-Sastre, A, Ott, M, Vignuzzi, M, Walter, P, Manglik, A, QCRG Structural Biology Consortium
登録日2020-10-27
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 370, 2020
7KOA
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BU of 7koa by Molmil
Room Temperature Structure of SARS-CoV-2 Nsp10/16 Methyltransferase in a Complex with Cap-0 and SAM Determined by Pink-Beam Serial Crystallography
分子名称: 2'-O-methyltransferase, Non-structural protein 10, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, ...
著者Wilamowski, M, Sherrell, D.A, Minasov, G, Shuvalova, L, Lavens, A, Henning, R, Maltseva, N, Rosas-Lemus, M, Kim, Y, Satchell, K.J.F, Srajer, V, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-11-07
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with Cap-0 and SAM Determined by Pink-Beam Serial Crystallography
To Be Published
2M0Z
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cis form of a photoswitchable PDZ domain crosslinked with an azobenzene derivative
分子名称: 3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid}, Tyrosine-protein phosphatase non-receptor type 13
著者Walser, R, Zerbe, O, Hamm, P.
登録日2012-11-09
公開日2013-07-03
最終更新日2013-08-07
実験手法SOLUTION NMR
主引用文献Kinetic response of a photoperturbed allosteric protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
7KOJ
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The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494 inhibitor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]-5-{[(prop-2-en-1-yl)carbamoyl]amino}benzamide, ACETATE ION, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-11-09
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder494
to be published
2IMM
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BU of 2imm by Molmil
Refined crystal structure of a recombinant immunoglobulin domain and a complementarity-determining region 1-grafted mutant
分子名称: ACETATE ION, IGA-KAPPA MCPC603 FV (LIGHT CHAIN), SULFATE ION
著者Steipe, B, Huber, R.
登録日1993-03-01
公開日1993-07-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Refined crystal structure of a recombinant immunoglobulin domain and a complementarity-determining region 1-grafted mutant.
J.Mol.Biol., 225, 1992
5BQU
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BU of 5bqu by Molmil
Crystal structure of HA17-HA33-Lactulose
分子名称: HA-17, HA-33, beta-D-galactopyranose-(1-4)-beta-D-fructofuranose
著者Lee, K, Lam, K, Jin, R.
登録日2015-05-29
公開日2015-10-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Inhibiting oral intoxication of botulinum neurotoxin A complex by carbohydrate receptor mimics.
Toxicon, 107, 2015
5LZB
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BU of 5lzb by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5BRZ
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MAGE-A3 reactive TCR in complex with MAGE-A3 in HLA-A1
分子名称: Beta-2-microglobulin, GLU-VAL-ASP-PRO-ILE-GLY-HIS-LEU-TYR, HLA class I histocompatibility antigen, ...
著者Raman, M.C.C, Rizkallah, P.J, Simmons, R, Donnellan, Z, Dukes, J, Bossi, G, LeProvost, G, Mahon, T, Hickman, E, LomaX, M, Oates, J, Hassan, N, Vuidepot, A, Sami, M, Cole, D.K, Jakobsen, B.K.
登録日2015-06-01
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Direct molecular mimicry enables off-target cardiovascular toxicity by an enhanced affinity TCR designed for cancer immunotherapy.
Sci Rep, 6, 2016
4QO1
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BU of 4qo1 by Molmil
p53 DNA binding domain in complex with Nb139
分子名称: Cellular tumor antigen p53, Nb139 Nanobody against the DNA-binding domain of p53, ZINC ION
著者De Gieter, S, Bethuyne, J, Gettemans, J, Garcia-Pino, A, Loris, R.
登録日2014-06-19
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.924 Å)
主引用文献A nanobody modulates the p53 transcriptional program without perturbing its functional architecture.
Nucleic Acids Res., 42, 2014
5M57
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Nek2 bound to arylaminopurine 6
分子名称: O6-CYCLOHEXYLMETHOXY-2-(4'-SULPHAMOYLANILINO) PURINE, Serine/threonine-protein kinase Nek2
著者Bayliss, R.
登録日2016-10-20
公開日2016-11-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017
5M1W
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Structure of a stable G-hairpin
分子名称: DNA (5'-D(*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G)-3')
著者Gajarsky, M, Zivkovic, M.L, Stadlbauer, P, Pagano, B, Fiala, R, Amato, J, Tomaska, L, Sponer, J, Plavec, J, Trantirek, L.
登録日2016-10-11
公開日2017-03-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a Stable G-Hairpin.
J. Am. Chem. Soc., 139, 2017
5BQ1
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Capturing Carbon Dioxide in beta Carbonic Anhydrase
分子名称: CARBON DIOXIDE, Carbonic anhydrase, ZINC ION
著者Aggarwal, M, Chua, T.K, Pinard, M.A, Szebenyi, D.M, McKenna, R.
登録日2015-05-28
公開日2015-10-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Carbon Dioxide "Trapped" in a beta-Carbonic Anhydrase.
Biochemistry, 54, 2015
4QKZ
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X-ray structure of the catalytic domain of MMP-8 with the inhibitor ML115
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Neutrophil collagenase, ...
著者Pochetti, G, Montanari, R, Capelli, D, Tortorella, P.
登録日2014-06-10
公開日2015-06-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Bone-Seeking Matrix Metalloproteinase Inhibitors for the Treatment of Skeletal Malignancy.
Pharmaceuticals, 13, 2020
7YV3
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genetically encoded pH sensor Lime at pH10
分子名称: Lime
著者Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
登録日2022-08-18
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
7KRX
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The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder441 inhibitor
分子名称: 3-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide, ACETATE ION, CHLORIDE ION, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-11-20
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder441
to be published
5BU4
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BU of 5bu4 by Molmil
RIBONUCLEASE T1 COMPLEX WITH 2'GMP
分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
著者Loris, R, Devos, S, Langhorst, U, Decanniere, K, Bouckaert, J, Maes, D, Transue, T.R, Steyaert, J.
登録日1998-09-15
公開日1998-09-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Conserved water molecules in a large family of microbial ribonucleases.
Proteins, 36, 1999
7YV5
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genetically encoded pH sensor Lime at pH6
分子名称: Lime
著者Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J.
登録日2022-08-18
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin.
ACS Sens, 8, 2023
5LDL
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BU of 5ldl by Molmil
Myristoylated T41I/T78I mutant of M-PMV matrix protein
分子名称: MYRISTIC ACID, myristoylated M-PMV matrix protein mutant
著者Kroupa, T, Hrabal, R.
登録日2016-06-27
公開日2016-07-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Membrane Interactions of the Mason-Pfizer Monkey Virus Matrix Protein and Its Budding Deficient Mutants.
J.Mol.Biol., 428, 2016
5BR8
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Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Sierra, R.G, Gati, C, Laksmono, H, Dao, E.H, Gul, S, Fuller, F, Kern, J, Chatterjee, R, Ibrahim, M, Brewster, A, Young, I.D, Michels-Clark, T, Aquila, A, Mengning, L, Hunter, M.S, Koglin, J.E, Boutet, S, Junco, E.A, Hayes, B, Bogan, M.J, Hampton, C.Y, Puglisi, E.V, Sauter, N.K, Stan, C.A, Zouni, A, Yano, J, Yachandra, V.K, Soltis, S.M, Puglisi, J.D, DeMirci, H.
登録日2015-05-29
公開日2015-11-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin
To Be Published

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件を2024-07-17に公開中

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