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PDB: 27201 件

7PV5
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RBD domain of D. melanogaster tRNA (uracil-5-)-methyltransferase homolog A (TRMT2A)
分子名称: CHLORIDE ION, FI05218p, SODIUM ION, ...
著者Witzenberger, M, Janowski, R, Niessing, D.
登録日2021-10-01
公開日2023-04-19
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the RNA-recognition motif of Drosophila melanogaster tRNA (uracil-5-)-methyltransferase homolog A
Acta Crystallogr.,Sect.F, 80, 2024
7TFL
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BU of 7tfl by Molmil
Atomic model of S. cerevisiae clamp loader RFC bound to DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2022-01-06
公開日2022-11-16
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Cryo-EM structures reveal that RFC recognizes both the 3'- and 5'-DNA ends to load PCNA onto gaps for DNA repair.
Elife, 11, 2022
1F98
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CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT T50V
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Brudler, R, Meyer, T.E, Genick, U.K, Tollin, G, Getzoff, E.D.
登録日2000-07-07
公開日2000-07-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein.
Biochemistry, 39, 2000
8RBO
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BU of 8rbo by Molmil
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp conformation
分子名称: DNA-directed RNA polymerase subunit Rpo10, DNA-directed RNA polymerase subunit Rpo11, DNA-directed RNA polymerase subunit Rpo12, ...
著者Tarau, D.M, Reichelt, R, Heiss, F.B, Pilsl, M, Hausner, W, Engel, C, Grohmann, D.
登録日2023-12-04
公開日2024-04-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment.
Nucleic Acids Res., 52, 2024
7PVM
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NMR structure of the C. thermophilum Xrn2 zinc finger
分子名称: 5'-3' exoribonuclease, ZINC ION
著者Overbeck, J.H, Sprangers, R, Wurm, J.P.
登録日2021-10-05
公開日2022-07-06
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Observation of conformational changes that underlie the catalytic cycle of Xrn2.
Nat.Chem.Biol., 18, 2022
6JDW
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BU of 6jdw by Molmil
CRYSTAL STRUCTURE OF HUMAN L-ARGININE:GLYCINE AMIDINOTRANSFERASE IN COMPLEX WITH GAMMA-AMINO BUTYRIC ACID
分子名称: GAMMA-AMINO-BUTANOIC ACID, PROTEIN (L-ARGININE:GLYCINE AMIDINOTRANSFERASE)
著者Fritsche, E, Humm, A, Huber, R.
登録日1998-10-12
公開日1999-02-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The ligand-induced structural changes of human L-Arginine:Glycine amidinotransferase. A mutational and crystallographic study.
J.Biol.Chem., 274, 1999
7STR
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BU of 7str by Molmil
Crystal Structure of Human Fab S24-1063 in the Complex with the N-teminal Domain of Nucleocapsid Protein from SARS CoV-2
分子名称: 1,2-ETHANEDIOL, Fab S24-1063, Heavy chain, ...
著者Kim, Y, Maltseva, N, Tesar, C, Jedrzejczak, R, Dugan, H, Stamper, C, Wilson, P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-11-15
公開日2022-08-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Epitopes recognition of SARS-CoV-2 nucleocapsid RNA binding domain by human monoclonal antibodies.
Iscience, 27, 2024
8SHB
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BU of 8shb by Molmil
Crystal Structure of PRMT3 with Compound YD1-208
分子名称: 5'-S-[3-(N'-phenylcarbamimidamido)propyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-13
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal Structure of PRMT3 with Compound YD1-208
To be published
8SIH
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Crystal Structure of PRMT4 with Compound YD1-289
分子名称: 5'-{[2-(benzylcarbamamido)ethyl][3-(N'-cyclopentylcarbamimidamido)propyl]amino}-5'-deoxyadenosine, CALCIUM ION, Histone-arginine methyltransferase CARM1
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of PRMT4 with Compound YD1-289
To be published
8SJM
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[3T12] Self-assembling left-handed tensegrity triangle with 12 interjunction base pairs and R3 symmetry
分子名称: DNA (5'-D(*CP*AP*GP*CP*AP*TP*CP*GP*CP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*CP*GP*CP*AP*TP*GP*TP*GP*GP*CP*GP*AP*TP*GP*C)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*AP*CP*AP*TP*GP*CP*GP*AP*G)-3'), ...
著者Janowski, J, Vecchioni, S, Sha, R, Ohayon, Y.P.
登録日2023-04-18
公開日2024-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (8.08 Å)
主引用文献Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
8SJN
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[3T13] Self-assembling left-handed tensegrity triangle with 13 interjunction base pairs and R3 symmetry
分子名称: DNA (5'-D(*CP*AP*GP*CP*AP*TP*CP*GP*CP*CP*TP*GP*AP*CP*TP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*TP*CP*GP*CP*TP*GP*TP*GP*GP*CP*GP*AP*TP*GP*C)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*AP*CP*AP*GP*CP*GP*AP*G)-3'), ...
著者Janowski, J, Vecchioni, S, Sha, R, Ohayon, Y.P.
登録日2023-04-18
公開日2024-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (7.3 Å)
主引用文献Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
1FB5
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BU of 1fb5 by Molmil
LOW RESOLUTION STRUCTURE OF OVINE ORNITHINE TRANSCARBMOYLASE IN THE UNLIGANDED STATE
分子名称: NORVALINE, ORNITHINE TRANSCARBAMOYLASE
著者Zanotti, G, Battistutta, R, Panzalorto, M, Francescato, P, Bruno, G, De Gregorio, A.
登録日2000-07-14
公開日2003-08-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Functional and structural characterization of ovine ornithine transcarbamoylase.
Org.Biomol.Chem., 1, 2003
8DB3
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BU of 8db3 by Molmil
Crystal structure of KaiC with truncated C-terminal coiled-coil domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC
著者Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
登録日2022-06-14
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献From primordial clocks to circadian oscillators.
Nature, 616, 2023
8SJS
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BU of 8sjs by Molmil
[3T18] Self-assembling right-handed tensegrity triangle with 18 interjunction base pairs and P63 symmetry
分子名称: DNA (5'-D(*CP*AP*GP*AP*GP*CP*CP*TP*GP*AP*CP*AP*TP*AP*CP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*CP*TP*GP*TP*GP*GP*CP*TP*C)-3'), DNA (5'-D(P*TP*CP*GP*TP*GP*GP*AP*CP*AP*GP*CP*G)-3'), ...
著者Janowski, J, Vecchioni, S, Sha, R, Ohayon, Y.P.
登録日2023-04-18
公開日2024-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (6.31 Å)
主引用文献Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
4XRK
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BU of 4xrk by Molmil
Crystal Structure of Importin Beta in a Polyethylene Glycol Condition
分子名称: Importin Beta
著者Tauchert, M.J, Neumann, P, Ficner, R, Dickmanns, A.
登録日2015-01-21
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Impact of the crystallization condition on importin-beta conformation.
Acta Crystallogr D Struct Biol, 72, 2016
8SJW
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BU of 8sjw by Molmil
[4T28] Self-assembling right-handed tensegrity triangle with 28 interjunction base pairs and R3 symmetry
分子名称: DNA (28-MER), DNA (5'-D(*GP*AP*AP*CP*TP*GP*CP*CP*TP*GP*AP*AP*TP*TP*AP*CP*TP*GP*AP*CP*CP*G)-3'), DNA (5'-D(*TP*CP*AP*TP*CP*AP*GP*TP*GP*GP*CP*AP*GP*T)-3'), ...
著者Janowski, J, Vecchioni, S, Sha, R, Ohayon, Y.P.
登録日2023-04-18
公開日2024-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (7.64 Å)
主引用文献Engineering tertiary chirality in helical biopolymers.
Proc.Natl.Acad.Sci.USA, 121, 2024
7TFI
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BU of 7tfi by Molmil
Atomic model of the S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to DNA with an open clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2022-01-06
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Cryo-EM structures reveal that RFC recognizes both the 3'- and 5'-DNA ends to load PCNA onto gaps for DNA repair.
Elife, 11, 2022
7TFH
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BU of 7tfh by Molmil
Atomic model of the S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to two DNA molecules, one at the 5'-recessed end and the other at the 3'-recessed end
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2022-01-06
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryo-EM structures reveal that RFC recognizes both the 3'- and 5'-DNA ends to load PCNA onto gaps for DNA repair.
Elife, 11, 2022
6P5N
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Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
分子名称: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
著者Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
登録日2019-05-30
公開日2019-09-25
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
7QCQ
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BU of 7qcq by Molmil
VHH Z70 in interaction with PHF6 Tau peptide
分子名称: GLYCEROL, Tau 301-312, VHH Z70
著者Danis, C, Dupre, E, Zejneli, O, Caillierez, R, Arrial, A, Begard, S, Loyens, A, Mortelecque, J, Cantrelle, F.-X, Hanoulle, X, Rain, J.-C, Colin, M, Buee, L, Landrieu, I.
登録日2021-11-25
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Inhibition of Tau seeding by targeting Tau nucleation core within neurons with a single domain antibody fragment.
Mol.Ther., 30, 2022
7TFJ
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BU of 7tfj by Molmil
Atomic model of S. cerevisiae clamp-clamp loader complex PCNA-RFC bound to DNA with a closed clamp ring
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2022-01-06
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures reveal that RFC recognizes both the 3'- and 5'-DNA ends to load PCNA onto gaps for DNA repair.
Elife, 11, 2022
7QB7
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BU of 7qb7 by Molmil
Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline-tRNA ligase) from Plasmodium falciparum in complex with MAT345 and L-Proline
分子名称: 1,2-ETHANEDIOL, PROLINE, Proline--tRNA ligase, ...
著者Johansson, C, Tye, M, Payne, N.C, Mazitschek, R, Oppermann, U.C.T.
登録日2021-11-18
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline-tRNA ligase) from Plasmodium falciparum in complex with MAT345
To Be Published
7TFK
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BU of 7tfk by Molmil
Atomic model of S. cerevisiae clamp loader RFC bound to two DNA molecules, one at the 5'-recessed end and the other at the 3'-recessed end
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2022-01-06
公開日2022-11-16
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Cryo-EM structures reveal that RFC recognizes both the 3'- and 5'-DNA ends to load PCNA onto gaps for DNA repair.
Elife, 11, 2022
8SIG
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BU of 8sig by Molmil
Crystal Structure of PRMT4 with Compound YD1-288
分子名称: 5'-{(3-aminopropyl)[2-(benzylcarbamamido)ethyl]amino}-5'-deoxyadenosine, Histone-arginine methyltransferase CARM1, SODIUM ION, ...
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of PRMT4 with Compound YD1-288
To be published
7QC1
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Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline-tRNA ligase) from Plasmodium falciparum in complex with MAT436
分子名称: 1,2-ETHANEDIOL, Proline--tRNA ligase, [(2~{R},3~{S})-2-[3-(7-bromanyl-6-chloranyl-4-oxidanylidene-quinazolin-3-yl)-2-oxidanylidene-propyl]piperidin-3-yl] ~{N}-[4-[[3-(2,3-dihydro-1~{H}-inden-2-ylcarbamoyl)pyrazin-2-yl]carbamoyl]piperazin-1-yl]sulfonylcarbamate
著者Johansson, C, Tye, M, Payne, N.C, Mazitschek, R, Oppermann, U.C.T.
登録日2021-11-22
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline-tRNA ligase) from Plasmodium falciparum in complex with MAT436
To Be Published

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件を2024-07-17に公開中

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